Source: slurm-wlm Version: 25.11.4-1 Severity: important Tags: ftbfs patch -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512
Hi, During a test rebuild of HDF5's reverse dependencies against HDF5 2.1.0 currently in experimental, slurm-wlm FTBFS because its build toolchain doesn't support this new major release. The attached patch is a workaround for this issue and supports both HDF5 1.14.6 in unstable and HDF5 2.1.0 in experimental. Best, _g. - -- System Information: Debian Release: 12.0 Architecture: amd64 (x86_64) Kernel: Linux 6.1.0-44-amd64 (SMP w/12 CPU threads; PREEMPT) Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEEoJObzArDE05WtIyR7+hsbH/+z4MFAmopJY8ACgkQ7+hsbH/+ z4MAJgf+LyiqvHtYZ5iMbQrc7+ErEDg59YAmGfJWQEgbuuTEn0hO6WQxaIGWR65p qZtBhIEpwD9uLBlFKN9UwMi2zViK7gCO6iloADGD2Y9P1uRZYKjRhcQGvLaDMNWw QBrMINWcrE/VPK/lyyoUwzfe++RfSeoRNQZXeQE7uwBLZqm2rwWNiDUl8VjUv0cF Nbm8I7nszoaaVEmBaj3Crlj+ppsGKc6URGU2Rq3K9qy0UQkY/Yt88kB3NpPKLxr+ 5/2MmNAYJmKnoWKJuurWdX1FckqQt51OMAhDMxXlWbUUSLKSDvMTpb78ycd6se1W fGe4EHByNsHyby/e7vX6BBFGkg2MjA== =OdiC -----END PGP SIGNATURE-----
diff -Nru slurm-wlm-25.11.4/debian/changelog slurm-wlm-25.11.4/debian/changelog --- slurm-wlm-25.11.4/debian/changelog 2026-02-28 00:00:11.000000000 +0100 +++ slurm-wlm-25.11.4/debian/changelog 2026-06-05 13:46:32.000000000 +0200 @@ -1,3 +1,10 @@ +slurm-wlm (25.11.4-1.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Fix FTBFS against HDF5 2.1.0 + + -- Gilles Filippini <[email protected]> Fri, 05 Jun 2026 13:46:32 +0200 + slurm-wlm (25.11.4-1) unstable; urgency=medium * New upstream release diff -Nru slurm-wlm-25.11.4/debian/patches/hdf5-2.1.0.patch slurm-wlm-25.11.4/debian/patches/hdf5-2.1.0.patch --- slurm-wlm-25.11.4/debian/patches/hdf5-2.1.0.patch 1970-01-01 01:00:00.000000000 +0100 +++ slurm-wlm-25.11.4/debian/patches/hdf5-2.1.0.patch 2026-06-05 13:46:32.000000000 +0200 @@ -0,0 +1,49 @@ +Index: slurm-wlm-25.11.4/auxdir/ax_lib_hdf5.m4 +=================================================================== +--- slurm-wlm-25.11.4.orig/auxdir/ax_lib_hdf5.m4 ++++ slurm-wlm-25.11.4/auxdir/ax_lib_hdf5.m4 +@@ -237,7 +237,15 @@ HDF5 support is being disabled (equivale + esac + done + +- HDF5_LIBS="-lhdf5 $HDF5_LIBS" ++ HDF5_LIBS="${HDF5_LIBS#"${HDF5_LIBS%%[![:space:]]*}"}" ++ HDF5_INFIX= ++ case "$HDF5_LIBS" in ++ -lhdf5_*) ++ HDF5_INFIX="${HDF5_LIBS#-lhdf5_}" ++ HDF5_INFIX="_${HDF5_INFIX%%_*}" ++ ;; ++ esac ++ HDF5_LIBS="-lhdf5$HDF5_INFIX $HDF5_LIBS" + AC_MSG_RESULT([yes (version $[HDF5_VERSION])]) + + dnl See if we can compile +@@ -251,13 +259,13 @@ HDF5 support is being disabled (equivale + LIBS=$HDF5_LIBS + LDFLAGS=$HDF5_LDFLAGS + AC_CHECK_HEADER([hdf5.h], [ac_cv_hadf5_h=yes], [ac_cv_hadf5_h=no]) +- AC_CHECK_LIB([hdf5], [H5Fcreate], [ac_cv_libhdf5=yes], ++ AC_CHECK_LIB([hdf5${HDF5_INFIX}], [H5Fcreate], [ac_cv_libhdf5=yes], + [ac_cv_libhdf5=no]) + if test "$ac_cv_hadf5_h" = "no" && test "$ac_cv_libhdf5" = "no" ; then + AC_MSG_WARN([Unable to compile HDF5 test program]) + fi + dnl Look for HDF5's high level library +- AC_CHECK_LIB([hdf5_hl], [main], [HDF5_LIBS="-lhdf5_hl $HDF5_LIBS"], []) ++ AC_CHECK_LIB([hdf5${HDF5_INFIX}_hl], [main], [HDF5_LIBS="-lhdf5${HDF5_INFIX}_hl $HDF5_LIBS"], []) + + CC=$ax_lib_hdf5_save_CC + CPPFLAGS=$ax_lib_hdf5_save_CPPFLAGS +@@ -294,9 +302,9 @@ HDF5 support is being disabled (equivale + for arg in $HDF5_LIBS + do + case "$arg" in #( +- -lhdf5_hl) HDF5_FLIBS="$HDF5_FLIBS -lhdf5hl_fortran $arg" ++ -lhdf5_hl) HDF5_FLIBS="$HDF5_FLIBS -lhdf5${HDF5_INFIX}_hl_fortran $arg" + ;; #( +- -lhdf5) HDF5_FLIBS="$HDF5_FLIBS -lhdf5_fortran $arg" ++ -lhdf5) HDF5_FLIBS="$HDF5_FLIBS -lhdf5${HDF5_INFIX}_fortran $arg" + ;; #( + *) HDF5_FLIBS="$HDF5_FLIBS $arg" + ;; diff -Nru slurm-wlm-25.11.4/debian/patches/series slurm-wlm-25.11.4/debian/patches/series --- slurm-wlm-25.11.4/debian/patches/series 2026-02-28 00:00:11.000000000 +0100 +++ slurm-wlm-25.11.4/debian/patches/series 2026-06-05 13:46:32.000000000 +0200 @@ -7,3 +7,4 @@ retry-getaddrinfo force-nvml fix-manpage-groff-warnings +hdf5-2.1.0.patch
