Package: src:indelible Version: 1.03-7 Severity: serious Tags: ftbfs forky sid
Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202608/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:indelible, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: configure.ac: not using Libtool autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: /usr/bin/autoconf --force autoreconf: configure.ac: not running autoheader: no config headers autoreconf: running: automake --add-missing --copy --force-missing configure.ac:4: installing './compile' configure.ac:16: installing './config.guess' configure.ac:16: installing './config.sub' configure.ac:2: installing './install-sh' configure.ac:2: installing './missing' Makefile.am:2: warning: source file 'src/indelible.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibility. Makefile.am:8: warning: source file 'src/control.cpp' is in a subdirectory, Makefile.am:8: but option 'subdir-objects' is disabled Makefile.am:8: warning: source file 'src/models.cpp' is in a subdirectory, Makefile.am:8: but option 'subdir-objects' is disabled Makefile.am:8: warning: source file 'src/paml.cpp' is in a subdirectory, Makefile.am:8: but option 'subdir-objects' is disabled Makefile.am:8: warning: source file 'src/randoms.cpp' is in a subdirectory, Makefile.am:8: but option 'subdir-objects' is disabled Makefile.am: installing './depcomp' autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '995' is supported by ustar format... yes checking whether GID '995' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether make supports the include directive... yes (GNU style) checking for gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C23 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of x86_64-linux-gnu-gcc... none checking how to run the C preprocessor... x86_64-linux-gnu-gcc -E checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking dependency style of x86_64-linux-gnu-g++... none checking for cos in -lm... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for size_t... yes checking for int32_t... yes checking for uint32_t... yes checking for _Bool... no checking for stdbool.h that conforms to C99 or later... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking whether malloc (0) returns nonnull... yes checking for limits.h... yes checking for floor... yes checking for pow... yes checking for sqrt... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: executing depfiles commands dh_auto_build make -j2 make[1]: Entering directory '/<<PKGBUILDDIR>>' x86_64-linux-gnu-g++ -DPACKAGE_NAME=\"indelible\" -DPACKAGE_TARNAME=\"indelible\" -DPACKAGE_VERSION=\"1.03\" -DPACKAGE_STRING=\"indelible\ 1.03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"indelible\" -DVERSION=\"1.03\" -DHAVE_LIBM=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_STDBOOL_H=1 -DHAVE_MALLOC=1 -DHAVE_LIMITS_H=1 -DHAVE_FLOOR=1 -DHAVE_POW=1 -DHAVE_SQRT=1 -I. -Isrc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o indelible-indelible.o `test -f 'src/indelible.cpp' || echo './'`src/indelible.cpp In file included from src/randoms.cpp:31, from src/paml.cpp:41, from src/models.cpp:35, from src/control.cpp:38, from src/indelible.cpp:135: src/MersenneTwister.h: In member function âMTRand::uint32 MTRand::randInt()â: src/MersenneTwister.h:187:25: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 187 | register uint32 s1; | ^~ src/MersenneTwister.h: In member function âvoid MTRand::seed(uint32*, uint32)â: src/MersenneTwister.h:232:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 232 | register int i = 1; | ^ src/MersenneTwister.h:233:25: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 233 | register uint32 j = 0; | ^ src/MersenneTwister.h:234:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 234 | register int k = ( N > seedLength ? N : seedLength ); | ^ src/MersenneTwister.h: In member function âvoid MTRand::initialize(uint32)â: src/MersenneTwister.h:273:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 273 | register uint32 *s = state; | ^ src/MersenneTwister.h:274:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 274 | register uint32 *r = state; | ^ src/MersenneTwister.h:275:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 275 | register int i = 1; | ^ src/MersenneTwister.h: In member function âvoid MTRand::reload()â: src/MersenneTwister.h:289:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 289 | register uint32 *p = state; | ^ src/MersenneTwister.h:290:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 290 | register int i; | ^ src/MersenneTwister.h:291:20: warning: arithmetic between different enumeration types âMTRand::<unnamed enum>â and âMTRand::<unnamed enum>â is deprecated [-Wdeprecated-enum-enum-conversion] 291 | for( i = N - M; i--; ++p ) | ~~^~~ src/MersenneTwister.h:294:32: warning: arithmetic between different enumeration types âMTRand::<unnamed enum>â and âMTRand::<unnamed enum>â is deprecated [-Wdeprecated-enum-enum-conversion] 294 | *p = twist( p[M-N], p[0], p[1] ); | ~^~ src/MersenneTwister.h:295:24: warning: arithmetic between different enumeration types âMTRand::<unnamed enum>â and âMTRand::<unnamed enum>â is deprecated [-Wdeprecated-enum-enum-conversion] 295 | *p = twist( p[M-N], p[0], state[0] ); | ~^~ src/MersenneTwister.h: In member function âvoid MTRand::save(uint32*) constâ: src/MersenneTwister.h:395:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 395 | register uint32 *sa = saveArray; | ^~ src/MersenneTwister.h:396:32: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 396 | register const uint32 *s = state; | ^ src/MersenneTwister.h:397:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 397 | register int i = N; | ^ src/MersenneTwister.h: In member function âvoid MTRand::load(uint32*)â: src/MersenneTwister.h:405:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 405 | register uint32 *s = state; | ^ src/MersenneTwister.h:406:26: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 406 | register uint32 *la = loadArray; | ^~ src/MersenneTwister.h:407:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 407 | register int i = N; | ^ src/MersenneTwister.h: In function âstd::ostream& operator<<(std::ostream&, const MTRand&)â: src/MersenneTwister.h:416:40: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 416 | register const MTRand::uint32 *s = mtrand.state; | ^ src/MersenneTwister.h:417:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 417 | register int i = mtrand.N; | ^ src/MersenneTwister.h: In function âstd::istream& operator>>(std::istream&, MTRand&)â: src/MersenneTwister.h:425:34: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 425 | register MTRand::uint32 *s = mtrand.state; | ^ src/MersenneTwister.h:426:22: warning: ISO C++17 does not allow âregisterâ storage class specifier [-Wregister] 426 | register int i = mtrand.N; | ^ src/paml.cpp: In function âint PMatUVRoot(double*, double, int, double*, double*, double*)â: src/paml.cpp:473:20: error: reference to âidentityâ is ambiguous 473 | if (t<1e-100) { identity (P, n); return(0); } | ^~~~~~~~ ⢠there are 2 candidates In file included from /usr/include/c++/16/bits/iterator_concepts.h:40, from /usr/include/c++/16/bits/stl_iterator_base_types.h:73, from /usr/include/c++/16/bits/stl_construct.h:61, from /usr/include/c++/16/bits/char_traits.h:59, from /usr/include/c++/16/ios:44, from /usr/include/c++/16/bits/ostream.h:43, from /usr/include/c++/16/ostream:42, from /usr/include/c++/16/iostream:43, from src/indelible.cpp:116: ⢠candidate 1: âstruct std::identityâ /usr/include/c++/16/bits/ranges_cmp.h:47:10: 47 | struct identity | ^~~~~~~~ ⢠candidate 2: âint identity(double*, int)â src/paml.cpp:61:5: 61 | int identity (double x[], int n) | ^~~~~~~~ make[1]: *** [Makefile:493: indelible-indelible.o] Error 1 make[1]: Leaving directory '/<<PKGBUILDDIR>>' dh_auto_build: error: make -j2 returned exit code 2 make: *** [debian/rules:7: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 --------------------------------------------------------------------------------
