Source: h5utils Version: 1.13.2-2 Severity: important Tags: upstream User: [email protected] Usertags: hdf-4.4
Dear Maintainer, Your package fails to detect HDF 4.4.0: checking for DFSDgetdata in -ldf... no configure: WARNING: can't find libdf (HDF4): won't be able to compile h5fromh4 or h4fromh5 The full buildlog is attached. Note that libdf was renamed to libhdf in 4.4.0. Kind Regards, Bas
dpkg-checkbuilddeps: error: unmet build dependencies: hdf5-tools libhdf4-dev [1;33mW: Unmet build-dependency in source[0m dh clean dh_clean dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building h5utils using existing ./h5utils_1.13.2.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building h5utils in h5utils_1.13.2-3.debian.tar.xz dpkg-source: info: building h5utils in h5utils_1.13.2-3.dsc [0mI: Generated dsc will be overwritten by build result; not generating changes file[0m I: Copying COW directory I: forking: rm -rf /var/cache/pbuilder/build/cow.1806068 I: forking: cp -al /var/cache/pbuilder/base-sid+rebuild.cow /var/cache/pbuilder/build/cow.1806068 I: removed stale ilistfile /var/cache/pbuilder/build/cow.1806068/.ilist I: forking: chroot /var/cache/pbuilder/build/cow.1806068 cowdancer-ilistcreate /.ilist 'find . -xdev -path ./home -prune -o \( \( -type l -o -type f \) -a -links +1 -print0 \) | xargs -0 stat --format '%d %i '' I: Invoking pbuilder I: forking: pbuilder build --debbuildopts --debbuildopts --buildplace /var/cache/pbuilder/build/cow.1806068 --buildresult .. --mirror http://ftp.nl.debian.org/debian/ --distribution sid --no-targz --internal-chrootexec 'chroot /var/cache/pbuilder/build/cow.1806068 cow-shell' /home/bas/tmp/debian/h5utils_1.13.2-3.dsc [0mI: Running in no-targz mode[0m [0mI: pbuilder: network access will be disabled during build[0m [0mI: Current time: Fri Sep 4 09:39:21 CEST 2026[0m [0mI: pbuilder-time-stamp: 1788507561[0m [0mI: copying local configuration[0m [1;33mW: --override-config is not set; not updating apt.conf Read the manpage for details.[0m [0mI: mounting /proc filesystem[0m [0mI: mounting /sys filesystem[0m [0mI: creating /{dev,run}/shm[0m [0mI: mounting /dev/pts filesystem[0m [0mI: redirecting /dev/ptmx to /dev/pts/ptmx[0m [0mI: policy-rc.d already exists[0m [0mI: Obtaining the cached apt archive contents[0m [0mI: Copying source file[0m [0mI: copying [/home/bas/tmp/debian/h5utils_1.13.2-3.dsc][0m [0mI: copying [/home/bas/tmp/debian/h5utils_1.13.2.orig.tar.gz][0m [0mI: copying [/home/bas/tmp/debian/h5utils_1.13.2-3.debian.tar.xz][0m [0mI: Extracting source[0m dpkg-source: warning: extracting unsigned source package (h5utils_1.13.2-3.dsc) dpkg-source: info: extracting h5utils in h5utils-1.13.2 dpkg-source: info: unpacking h5utils_1.13.2.orig.tar.gz dpkg-source: info: unpacking h5utils_1.13.2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying acute-accent-in-manual-page.patch [0mI: Not using root during the build.[0m [0mI: Installing the build-deps[0m -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team <[email protected]> Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), hdf5-tools, libhdf5-dev, libhdf4-dev, libpng-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18425 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on hdf5-tools; however: Package hdf5-tools is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf4-dev; however: Package libhdf4-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} hdf5-tools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli-dev{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libelf1t64{a} libevent-2.1-7t64{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgmp-dev{a} libgnutls-dane0t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgssrpc4t64{a} libhdf4-11{a} libhdf4-dev{a} libhdf5-320{a} libhdf5-cpp-320{a} libhdf5-dev{a} libhdf5-fortran-320{a} libhdf5-hl-320{a} libhdf5-hl-cpp-320{a} libhdf5-hl-fortran-320{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkrb5-dev{a} libldap-dev{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-dev{a} libnghttp3-dev{a} libngtcp2-crypto-ossl-dev{a} libngtcp2-dev{a} libp11-kit-dev{a} libpipeline1{a} libpkgconf7{a} libpng-dev{a} libpng16-16t64{a} libpsl-dev{a} librtmp-dev{a} librtmp1{a} libssh2-1-dev{a} libssl-dev{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libtool{a} libuchardet0{a} libunbound8{a} libunistring-dev{a} libxml2-16{a} libzstd-dev{a} m4{a} man-db{a} nettle-dev{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libpng-tools libtasn1-doc lynx python3 wget 0 packages upgraded, 83 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/36.7 MB of archives. After unpacking 152 MB will be used. Writing extended state information... Preconfiguring packages ... Selecting previously unselected package libmagic-mgc. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18425 files and directories currently installed.) Preparing to unpack .../00-libmagic-mgc_1%3a5.47-4_amd64.deb ... Unpacking libmagic-mgc (1:5.47-4) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../01-libmagic1t64_1%3a5.47-4_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.47-4) ... Selecting previously unselected package file. Preparing to unpack .../02-file_1%3a5.47-4_amd64.deb ... Unpacking file (1:5.47-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../03-gettext-base_1.0-3_amd64.deb ... Unpacking gettext-base (1.0-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../04-libuchardet0_0.0.8-2+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../05-groff-base_1.24.1-1_amd64.deb ... Unpacking groff-base (1.24.1-1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../06-bsdextrautils_2.42.2-4_amd64.deb ... Unpacking bsdextrautils (2.42.2-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../07-libpipeline1_1.5.8-3_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-3) ... Selecting previously unselected package man-db. Preparing to unpack .../08-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../09-m4_1.4.21-1_amd64.deb ... Unpacking m4 (1.4.21-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../10-autoconf_2.73-2_all.deb ... Unpacking autoconf (2.73-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../11-autotools-dev_20240727.1+nmu1_all.deb ... Unpacking autotools-dev (20240727.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../12-automake_1%3a1.18.1-4_all.deb ... Unpacking automake (1:1.18.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../13-autopoint_1.0-3_all.deb ... Unpacking autopoint (1.0-3) ... Selecting previously unselected package comerr-dev:amd64. Preparing to unpack .../14-comerr-dev_2.1-1.47.4-1+b1_amd64.deb ... Unpacking comerr-dev:amd64 (2.1-1.47.4-1+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_14.3_all.deb ... Unpacking libdebhelper-perl (14.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.6.2-2_all.deb ... Unpacking libtool (2.6.2-2) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_22_all.deb ... Unpacking dh-autoreconf (22) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.1-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.196-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.196-1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.17-1_amd64.deb ... Unpacking dwz (0.17-1) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../23-libxml2-16_2.15.3+dfsg-1+b1_amd64.deb ... Unpacking libxml2-16:amd64 (2.15.3+dfsg-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_1.0-3_amd64.deb ... Unpacking gettext (1.0-3) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.22_all.deb ... Unpacking po-debconf (1.0.22) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_14.3_all.deb ... Unpacking debhelper (14.3) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../28-hdf5-helpers_2.2.0+repack-4_amd64.deb ... Unpacking hdf5-helpers (2.2.0+repack-4) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../29-libsz2_1.1.7-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.7-1) ... Selecting previously unselected package libhdf5-320:amd64. Preparing to unpack .../30-libhdf5-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-hl-320:amd64. Preparing to unpack .../31-libhdf5-hl-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-hl-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package hdf5-tools. Preparing to unpack .../32-hdf5-tools_2.2.0+repack-4_amd64.deb ... Unpacking hdf5-tools (2.2.0+repack-4) ... Selecting previously unselected package libgssrpc4t64:amd64. Preparing to unpack .../33-libgssrpc4t64_1.22.1-3_amd64.deb ... Unpacking libgssrpc4t64:amd64 (1.22.1-3) ... Selecting previously unselected package libkadm5clnt-mit12:amd64. Preparing to unpack .../34-libkadm5clnt-mit12_1.22.1-3_amd64.deb ... Unpacking libkadm5clnt-mit12:amd64 (1.22.1-3) ... Selecting previously unselected package libkdb5-10t64:amd64. Preparing to unpack .../35-libkdb5-10t64_1.22.1-3_amd64.deb ... Unpacking libkdb5-10t64:amd64 (1.22.1-3) ... Selecting previously unselected package libkadm5srv-mit12:amd64. Preparing to unpack .../36-libkadm5srv-mit12_1.22.1-3_amd64.deb ... Unpacking libkadm5srv-mit12:amd64 (1.22.1-3) ... Selecting previously unselected package krb5-multidev:amd64. Preparing to unpack .../37-krb5-multidev_1.22.1-3_amd64.deb ... Unpacking krb5-multidev:amd64 (1.22.1-3) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../38-libaec0_1.1.7-1_amd64.deb ... Unpacking libaec0:amd64 (1.1.7-1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../39-libaec-dev_1.1.7-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.1.7-1) ... Selecting previously unselected package libbrotli-dev:amd64. Preparing to unpack .../40-libbrotli-dev_1.2.0-4+b1_amd64.deb ... Unpacking libbrotli-dev:amd64 (1.2.0-4+b1) ... Selecting previously unselected package libidn2-dev:amd64. Preparing to unpack .../41-libidn2-dev_2.3.8-5_amd64.deb ... Unpacking libidn2-dev:amd64 (2.3.8-5) ... Selecting previously unselected package libkrb5-dev:amd64. Preparing to unpack .../42-libkrb5-dev_1.22.1-3_amd64.deb ... Unpacking libkrb5-dev:amd64 (1.22.1-3) ... Selecting previously unselected package libldap-dev:amd64. Preparing to unpack .../43-libldap-dev_2.6.14+dfsg-2_amd64.deb ... Unpacking libldap-dev:amd64 (2.6.14+dfsg-2) ... Selecting previously unselected package libpkgconf7:amd64. Preparing to unpack .../44-libpkgconf7_2.5.1-4_amd64.deb ... Unpacking libpkgconf7:amd64 (2.5.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../45-pkgconf-bin_2.5.1-4_amd64.deb ... Unpacking pkgconf-bin (2.5.1-4) ... Selecting previously unselected package pkgconf:amd64. Preparing to unpack .../46-pkgconf_2.5.1-4_amd64.deb ... Unpacking pkgconf:amd64 (2.5.1-4) ... Selecting previously unselected package libnghttp2-dev:amd64. Preparing to unpack .../47-libnghttp2-dev_1.70.0-1_amd64.deb ... Unpacking libnghttp2-dev:amd64 (1.70.0-1) ... Selecting previously unselected package libnghttp3-dev:amd64. Preparing to unpack .../48-libnghttp3-dev_1.17.0-1_amd64.deb ... Unpacking libnghttp3-dev:amd64 (1.17.0-1) ... Selecting previously unselected package libngtcp2-crypto-ossl-dev:amd64. Preparing to unpack .../49-libngtcp2-crypto-ossl-dev_1.24.0-1_amd64.deb ... Unpacking libngtcp2-crypto-ossl-dev:amd64 (1.24.0-1) ... Selecting previously unselected package libngtcp2-dev:amd64. Preparing to unpack .../50-libngtcp2-dev_1.24.0-1_amd64.deb ... Unpacking libngtcp2-dev:amd64 (1.24.0-1) ... Selecting previously unselected package libunistring-dev:amd64. Preparing to unpack .../51-libunistring-dev_1.4.2-1_amd64.deb ... Unpacking libunistring-dev:amd64 (1.4.2-1) ... Selecting previously unselected package libpsl-dev:amd64. Preparing to unpack .../52-libpsl-dev_0.23.3-1_amd64.deb ... Unpacking libpsl-dev:amd64 (0.23.3-1) ... Selecting previously unselected package libtasn1-6:amd64. Preparing to unpack .../53-libtasn1-6_4.21.0-2+b1_amd64.deb ... Unpacking libtasn1-6:amd64 (4.21.0-2+b1) ... Selecting previously unselected package libgnutls30t64:amd64. Preparing to unpack .../54-libgnutls30t64_3.8.13-1_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.13-1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../55-librtmp1_2.6-1_amd64.deb ... Unpacking librtmp1:amd64 (2.6-1) ... Selecting previously unselected package libgmp-dev:amd64. Preparing to unpack .../56-libgmp-dev_2%3a6.3.0+dfsg-5+b2_amd64.deb ... Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-5+b2) ... Selecting previously unselected package libevent-2.1-7t64:amd64. Preparing to unpack .../57-libevent-2.1-7t64_2.1.13-stable-1_amd64.deb ... Unpacking libevent-2.1-7t64:amd64 (2.1.13-stable-1) ... Selecting previously unselected package libunbound8:amd64. Preparing to unpack .../58-libunbound8_1.26.0-2_amd64.deb ... Unpacking libunbound8:amd64 (1.26.0-2) ... Selecting previously unselected package libgnutls-dane0t64:amd64. Preparing to unpack .../59-libgnutls-dane0t64_3.8.13-1_amd64.deb ... Unpacking libgnutls-dane0t64:amd64 (3.8.13-1) ... Selecting previously unselected package libp11-kit-dev:amd64. Preparing to unpack .../60-libp11-kit-dev_0.26.5-1_amd64.deb ... Unpacking libp11-kit-dev:amd64 (0.26.5-1) ... Selecting previously unselected package libtasn1-6-dev:amd64. Preparing to unpack .../61-libtasn1-6-dev_4.21.0-2+b1_amd64.deb ... Unpacking libtasn1-6-dev:amd64 (4.21.0-2+b1) ... Selecting previously unselected package nettle-dev:amd64. Preparing to unpack .../62-nettle-dev_3.10.2-1+b1_amd64.deb ... Unpacking nettle-dev:amd64 (3.10.2-1+b1) ... Selecting previously unselected package libgnutls28-dev:amd64. Preparing to unpack .../63-libgnutls28-dev_3.8.13-1_amd64.deb ... Unpacking libgnutls28-dev:amd64 (3.8.13-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../64-zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Selecting previously unselected package librtmp-dev:amd64. Preparing to unpack .../65-librtmp-dev_2.6-1_amd64.deb ... Unpacking librtmp-dev:amd64 (2.6-1) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../66-libssl-dev_3.6.4-1_amd64.deb ... Unpacking libssl-dev:amd64 (3.6.4-1) ... Selecting previously unselected package libssh2-1-dev:amd64. Preparing to unpack .../67-libssh2-1-dev_1.11.1-6_amd64.deb ... Unpacking libssh2-1-dev:amd64 (1.11.1-6) ... Selecting previously unselected package libzstd-dev:amd64. Preparing to unpack .../68-libzstd-dev_1.5.7+dfsg-4_amd64.deb ... Unpacking libzstd-dev:amd64 (1.5.7+dfsg-4) ... Selecting previously unselected package libcurl4-openssl-dev:amd64. Preparing to unpack .../69-libcurl4-openssl-dev_8.22.0-1_amd64.deb ... Unpacking libcurl4-openssl-dev:amd64 (8.22.0-1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../70-libgfortran5_16.2.0-2_amd64.deb ... Unpacking libgfortran5:amd64 (16.2.0-2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../71-libjpeg62-turbo_1%3a3.1.3-4_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:3.1.3-4) ... Selecting previously unselected package libhdf4-11:amd64. Preparing to unpack .../72-libhdf4-11_4.4.0-1~exp1_amd64.deb ... Unpacking libhdf4-11:amd64 (4.4.0-1~exp1) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../73-libjpeg62-turbo-dev_1%3a3.1.3-4_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:3.1.3-4) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../74-libjpeg-dev_1%3a3.1.3-4_amd64.deb ... Unpacking libjpeg-dev:amd64 (1:3.1.3-4) ... Selecting previously unselected package libhdf4-dev. Preparing to unpack .../75-libhdf4-dev_4.4.0-1~exp1_amd64.deb ... Unpacking libhdf4-dev (4.4.0-1~exp1) ... Selecting previously unselected package libhdf5-cpp-320:amd64. Preparing to unpack .../76-libhdf5-cpp-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-cpp-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-fortran-320:amd64. Preparing to unpack .../77-libhdf5-fortran-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-fortran-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-320:amd64. Preparing to unpack .../78-libhdf5-hl-fortran-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-hl-fortran-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-hl-cpp-320:amd64. Preparing to unpack .../79-libhdf5-hl-cpp-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-hl-cpp-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../80-libhdf5-dev_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-dev (2.2.0+repack-4) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../81-libpng16-16t64_1.6.58-1_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.58-1) ... Selecting previously unselected package libpng-dev:amd64. Preparing to unpack .../82-libpng-dev_1.6.58-1_amd64.deb ... Unpacking libpng-dev:amd64 (1.6.58-1) ... Setting up libunistring-dev:amd64 (1.4.2-1) ... Setting up libpipeline1:amd64 (1.5.8-3) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5+b2) ... Setting up libzstd-dev:amd64 (1.5.7+dfsg-4) ... Setting up bsdextrautils (2.42.2-4) ... Setting up hdf5-helpers (2.2.0+repack-4) ... Setting up nettle-dev:amd64 (3.10.2-1+b1) ... Setting up libmagic-mgc (1:5.47-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.15.3+dfsg-1+b1) ... Setting up libdebhelper-perl (14.3) ... Setting up libpkgconf7:amd64 (2.5.1-4) ... Setting up libmagic1t64:amd64 (1:5.47-4) ... Setting up gettext-base (1.0-3) ... Setting up m4 (1.4.21-1) ... Setting up libevent-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up file (1:5.47-4) ... Setting up libngtcp2-dev:amd64 (1.24.0-1) ... Setting up libaec0:amd64 (1.1.7-1) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libunbound8:amd64 (1.26.0-2) ... Setting up libjpeg62-turbo:amd64 (1:3.1.3-4) ... Setting up libjpeg62-turbo-dev:amd64 (1:3.1.3-4) ... Setting up libgssrpc4t64:amd64 (1.22.1-3) ... Setting up libldap-dev:amd64 (2.6.14+dfsg-2) ... Setting up comerr-dev:amd64 (2.1-1.47.4-1+b1) ... Setting up libssl-dev:amd64 (3.6.4-1) ... Setting up libpng16-16t64:amd64 (1.6.58-1) ... Setting up autopoint (1.0-3) ... Setting up pkgconf-bin (2.5.1-4) ... Setting up libidn2-dev:amd64 (2.3.8-5) ... Setting up libgfortran5:amd64 (16.2.0-2) ... Setting up autoconf (2.73-2) ... Setting up libnghttp3-dev:amd64 (1.17.0-1) ... Setting up libngtcp2-crypto-ossl-dev:amd64 (1.24.0-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up dwz (0.17-1) ... Setting up libuchardet0:amd64 (0.0.8-2+b2) ... Setting up libtasn1-6:amd64 (4.21.0-2+b1) ... Setting up libtasn1-6-dev:amd64 (4.21.0-2+b1) ... Setting up libbrotli-dev:amd64 (1.2.0-4+b1) ... Setting up libp11-kit-dev:amd64 (0.26.5-1) ... Setting up libsz2:amd64 (1.1.7-1) ... Setting up libkadm5clnt-mit12:amd64 (1.22.1-3) ... Setting up libgnutls30t64:amd64 (3.8.13-1) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up gettext (1.0-3) ... Setting up libkdb5-10t64:amd64 (1.22.1-3) ... Setting up libhdf4-11:amd64 (4.4.0-1~exp1) ... Setting up libtool (2.6.2-2) ... Setting up libpng-dev:amd64 (1.6.58-1) ... Setting up libaec-dev:amd64 (1.1.7-1) ... Setting up libjpeg-dev:amd64 (1:3.1.3-4) ... Setting up pkgconf:amd64 (2.5.1-4) ... Setting up libpsl-dev:amd64 (0.23.3-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (22) ... Setting up libgnutls-dane0t64:amd64 (3.8.13-1) ... Setting up librtmp1:amd64 (2.6-1) ... Setting up libssh2-1-dev:amd64 (1.11.1-6) ... Setting up libhdf4-dev (4.4.0-1~exp1) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up groff-base (1.24.1-1) ... Setting up libkadm5srv-mit12:amd64 (1.22.1-3) ... Setting up libhdf5-320:amd64 (2.2.0+repack-4) ... Setting up krb5-multidev:amd64 (1.22.1-3) ... Setting up libgnutls28-dev:amd64 (3.8.13-1) ... Setting up libnghttp2-dev:amd64 (1.70.0-1) ... Setting up libhdf5-cpp-320:amd64 (2.2.0+repack-4) ... Setting up po-debconf (1.0.22) ... Setting up man-db (2.13.1-1) ... Building database of manual pages ... Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libkrb5-dev:amd64 (1.22.1-3) ... Setting up librtmp-dev:amd64 (2.6-1) ... Setting up libhdf5-hl-320:amd64 (2.2.0+repack-4) ... Setting up libhdf5-fortran-320:amd64 (2.2.0+repack-4) ... Setting up debhelper (14.3) ... Setting up libhdf5-hl-fortran-320:amd64 (2.2.0+repack-4) ... Setting up hdf5-tools (2.2.0+repack-4) ... Setting up libcurl4-openssl-dev:amd64 (8.22.0-1) ... Setting up libhdf5-hl-cpp-320:amd64 (2.2.0+repack-4) ... Setting up libhdf5-dev (2.2.0+repack-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5_serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/cmake/hdf5_serial to provide /usr/lib/x86_64-linux-gnu/cmake/hdf5 (hdf5.cmake) in auto mode Processing triggers for libc-bin (2.43-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps [0mI: Copying back the cached apt archive contents[0m [0mI: Building the package[0m [0mI: Running cd /build/h5utils-1.13.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" HOME="/nonexistent" dpkg-buildpackage -us -uc && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" HOME="/nonexistent" dpkg-genchanges -S > ../h5utils_1.13.2-3_source.changes[0m dpkg-buildpackage: info: source package h5utils dpkg-buildpackage: info: source version 1.13.2-3 dpkg-buildpackage: info: source distribution UNRELEASED dpkg-buildpackage: info: source changed by Bas Couwenberg <[email protected]> dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean dpkg-source -b . dpkg-source: info: using source format '3.0 (quilt)' dpkg-source: info: building h5utils using existing ../h5utils_1.13.2.orig.tar.gz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: building h5utils in ../h5utils_1.13.2-3.debian.tar.xz dpkg-source: info: building h5utils in ../h5utils_1.13.2-3.dsc debian/rules binary dh binary dh_update_autotools_config dh_autoreconf autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: configure.ac: not using Libtool autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: /usr/bin/autoconf --force configure.ac:6: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:6: You should use the 'AC_CONFIG_HEADERS' macro instead. aclocal.m4:744: AM_CONFIG_HEADER is expanded from... configure.ac:6: the top level autoreconf: running: /usr/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:10: installing './compile' configure.ac:3: installing './install-sh' configure.ac:3: installing './missing' Makefile.am: installing './depcomp' autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/h5utils-1.13.2' dh_auto_configure -- --with-hdf4 ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-hdf4 checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1234' is supported by ustar format... yes checking whether GID '1234' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C23 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-gcc... none checking for sin in -lm... yes checking for snprintf... yes checking for inflate in -lz... yes checking for png_create_write_struct in -lpng... yes checking for evaluator_get_variables in -lmatheval... no configure: WARNING: can't find libmatheval: won't be able to compile h5math checking for h4toh5... no checking for h5toh4... no checking for jpeg_start_compress in -ljpeg... yes checking for DFSDgetdata in -ldf... no configure: WARNING: can't find libdf (HDF4): won't be able to compile h5fromh4 or h4fromh5 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for hdf.h... no checking for hdf/hdf.h... yes checking for H5Fopen in -lhdf5... yes checking for mkoctfile... no configure: WARNING: can't find mkoctfile: won't be able to compile h5read.oct checking for v5dCreate in -lv5d... no checking for vis5d/v5d.h... no checking for vis5d+/v5d.h... no checking for arpa/inet.h... yes checking for netinet/in.h... yes checking for stdint.h... (cached) yes checking for inttypes.h... (cached) yes checking for uint16_t... yes checking for uint32_t... yes checking for htons... yes checking size of float... 4 checking for htonl... yes checking for wordexp.h... yes checking for wordexp... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating doc/man/h5topng.1 config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/build/h5utils-1.13.2' dh_auto_build make -j11 make[1]: Entering directory '/build/h5utils-1.13.2' make all-am make[2]: Entering directory '/build/h5utils-1.13.2' x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5totxt.o h5totxt.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o arrayh5.o arrayh5.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5utils.o h5utils.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5fromtxt.o h5fromtxt.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5tovtk.o h5tovtk.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5topng.o h5topng.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o writepng.o writepng.c x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o h5cyl2cart.o h5cyl2cart.c x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o h5totxt h5totxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o h5fromtxt h5fromtxt.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o h5tovtk h5tovtk.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o h5cyl2cart h5cyl2cart.o arrayh5.o h5utils.o -lhdf5 -lz -lm x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/h5utils-1.13.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o h5topng h5topng.o writepng.o arrayh5.o h5utils.o -lpng -lhdf5 -lz -lm make[2]: Leaving directory '/build/h5utils-1.13.2' make[1]: Leaving directory '/build/h5utils-1.13.2' dh_auto_test make -j11 check TESTSUITEFLAGS="-j11 --verbose" VERBOSE=1 make[1]: Entering directory '/build/h5utils-1.13.2' make[1]: Leaving directory '/build/h5utils-1.13.2' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/h5utils/ make -j11 install DESTDIR=/build/h5utils-1.13.2/debian/h5utils AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/h5utils-1.13.2' make[2]: Entering directory '/build/h5utils-1.13.2' /usr/bin/mkdir -p '/build/h5utils-1.13.2/debian/h5utils/usr/bin' /usr/bin/mkdir -p '/build/h5utils-1.13.2/debian/h5utils/usr/share/h5utils' /usr/bin/mkdir -p '/build/h5utils-1.13.2/debian/h5utils/usr/share/man/man1' /usr/bin/install -c h5totxt h5fromtxt h5tovtk h5topng '/build/h5utils-1.13.2/debian/h5utils/usr/bin' /usr/bin/mkdir -p '/build/h5utils-1.13.2/debian/h5utils/usr/share/h5utils/colormaps' /usr/bin/install -c -m 644 colormaps/autumn colormaps/bluered colormaps/bone colormaps/colorcube colormaps/cool colormaps/copper colormaps/flag colormaps/gray colormaps/green colormaps/hot colormaps/hsv colormaps/jet colormaps/lines colormaps/pink colormaps/prism colormaps/spring colormaps/summer colormaps/vga colormaps/winter colormaps/yarg colormaps/yellow colormaps/dkbluered colormaps/viridis colormaps/inferno colormaps/RdBu colormaps/BrBG '/build/h5utils-1.13.2/debian/h5utils/usr/share/h5utils/colormaps' /usr/bin/install -c -m 644 doc/man/h5totxt.1 doc/man/h5fromtxt.1 doc/man/h5tovtk.1 doc/man/h5topng.1 '/build/h5utils-1.13.2/debian/h5utils/usr/share/man/man1' make[2]: Leaving directory '/build/h5utils-1.13.2' make[1]: Leaving directory '/build/h5utils-1.13.2' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'h5utils-dbgsym' in '../h5utils-dbgsym_1.13.2-3_amd64.deb'. dpkg-deb: building package 'h5utils' in '../h5utils_1.13.2-3_amd64.deb'. dpkg-genbuildinfo -O../h5utils_1.13.2-3_amd64.buildinfo dpkg-genchanges -O../h5utils_1.13.2-3_amd64.changes dpkg-genchanges: info: not including original source code in upload dpkg-source --after-build . dpkg-buildpackage: info: binary and diff upload (original source NOT included) dpkg-genchanges: info: not including original source code in upload [0mI: copying local configuration[0m [0mI: user script /var/cache/pbuilder/build/cow.1806068/tmp/hooks/B90lintian starting[0m Not running lintian [0mI: user script /var/cache/pbuilder/build/cow.1806068/tmp/hooks/B90lintian finished[0m [0mI: Copying back the cached apt archive contents[0m [0mI: unmounting dev/ptmx filesystem[0m [0mI: unmounting dev/pts filesystem[0m [0mI: unmounting dev/shm filesystem[0m [0mI: unmounting proc filesystem[0m [0mI: unmounting sys filesystem[0m [0mI: Current time: Fri Sep 4 09:40:39 CEST 2026[0m [0mI: pbuilder-time-stamp: 1788507639[0m I: Cleaning COW directory I: forking: rm -rf /var/cache/pbuilder/build/cow.1806068

