Source: python-pybedtools
Version: 0.10.0-6
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Hi,

python-pybedtools currently FTBFS in unstable:

   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" 
module
I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation 
--wheel --outdir 
/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
  
* Building wheel...
pybedtools uses setuptools (https://packaging.python.org/installing/) for 
installation but setuptools was not found

TIP pass --env-dir and --sdist-extract-dir to keep the build environment and 
sources, then see 
https://build.pypa.io/en/stable/how-to/troubleshooting.html#debug-a-failed-build
 for help debugging a failed build
ERROR Backend subprocess exited when trying to invoke build_wheel
E: pybuild pybuild:485: build: plugin pyproject failed with: exit code=1: 
python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir 
/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
  
dh_auto_build: error: pybuild --build -i python{version} -p 3.14 --parallel=12 
returned exit code 13
make: *** [debian/rules:20: binary] Error 25

Full build log is enclosed.

Best wishes,

- -- 
Pierre

-----BEGIN PGP SIGNATURE-----
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=VHWG
-----END PGP SIGNATURE-----
 dpkg-buildpackage -us -uc -ui
dpkg-buildpackage: info: source package python-pybedtools
dpkg-buildpackage: info: source version 0.10.0-6
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Santiago Vila <[email protected]>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
dpkg-source: info: using options from 
/home/pgt/python-pybedtools-0.10.0/debian/source/options: 
--extend-diff-ignore=(pybedtools/version.py|docs/source/pybedtools.featurefuncs.*.rst)
 debian/rules clean
dh clean --with python3,sphinxdoc --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 dpkg-source -b .
dpkg-source: info: using options from 
/home/pgt/python-pybedtools-0.10.0/debian/source/options: 
--extend-diff-ignore=(pybedtools/version.py|docs/source/pybedtools.featurefuncs.*.rst)
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building python-pybedtools using existing 
../python-pybedtools_0.10.0.orig.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: warning: ignoring deletion of file 
docs/source/autodocs/pybedtools.contrib.plotting.Track.rst, use 
--include-removal to override
dpkg-source: info: building python-pybedtools in 
../python-pybedtools_0.10.0-6.debian.tar.xz
dpkg-source: info: building python-pybedtools in 
../python-pybedtools_0.10.0-6.dsc
 debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" 
module
I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation 
--wheel --outdir 
/home/pgt/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools  
* Building wheel...
pybedtools uses setuptools (https://packaging.python.org/installing/) for 
installation but setuptools was not found

TIP pass --env-dir and --sdist-extract-dir to keep the build environment and 
sources, then see 
https://build.pypa.io/en/stable/how-to/troubleshooting.html#debug-a-failed-build
 for help debugging a failed build
ERROR Backend subprocess exited when trying to invoke build_wheel
E: pybuild pybuild:485: build: plugin pyproject failed with: exit code=1: 
python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir 
/home/pgt/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools  
dh_auto_build: error: pybuild --build -i python{version} -p 3.14 --parallel=4 
returned exit code 13
make: *** [debian/rules:20: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit 
status 2

Reply via email to