Package: fslview Version: 3.0+4.0.1-2~etch.apsy1 Severity: normal Hi,
I extracted a structural image (axial slices neurological orientation) using bet and needed to edit the resulting mask. So I loaded the mask, edited and saved it. On reloading the mask left-right was switched. Error analysis: fslview allways show neurological orientation. On loading the image it honours the information of the header, that the image is in neurological orientation. When saving fslview appearently writes the image in radiological convention but not adapting the header. That way it shouts itself in the foot apon reloading. If one knows about the problem one can issue a fslswapdim -x y z afterwards but it took me a while to find out, why my edited masks look "funny". Therefor I do consider this a bug as it is an unexpected behaviour. Regards, Roland -- System Information: Debian Release: 4.0 APT prefers stable APT policy: (500, 'stable'), (99, 'testing') Architecture: i386 (i686) Shell: /bin/sh linked to /bin/bash Kernel: Linux 2.6.22.5-mod Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8) Versions of packages fslview depends on: ii libc6 2.3.6.ds1-13etch2 GNU C Library: Shared libraries ii libexpat1 1.95.8-3.4 XML parsing C library - runtime li ii libfreetype6 2.2.1-5+etch1 FreeType 2 font engine, shared lib ii libfslio0 0.6-2~etch.apsy1 IO libraries for the NIfTI-1 data ii libgcc1 1:4.1.1-21 GCC support library ii libgl1-mesa-glx [libgl 6.5.1-0.6 A free implementation of the OpenG ii libice6 1:1.0.1-2 X11 Inter-Client Exchange library ii libjpeg62 6b-13 The Independent JPEG Group's JPEG ii libnewmat10 1.10.4-2 matrix manipulations C++ library ii libniftiio1 0.6-2~etch.apsy1 IO libraries for the NIfTI-1 data ii libpng12-0 1.2.15~beta5-1 PNG library - runtime ii libqt3-mt 3:3.3.7-4 Qt GUI Library (Threaded runtime v ii libqwt4c2 4.2.0-4 Qt widgets library for technical a ii libsm6 1:1.0.1-3 X11 Session Management library ii libstdc++6 4.1.1-21 The GNU Standard C++ Library v3 ii libtiff4 3.8.2-7 Tag Image File Format (TIFF) libra ii libvtk5 5.0.2-4 Visualization Toolkit - A high lev ii libvtk5-qt3 5.0.2-4 Visualization Toolkit - A high lev ii libx11-6 2:1.0.3-7 X11 client-side library ii libxext6 1:1.0.1-2 X11 miscellaneous extension librar ii libxt6 1:1.0.2-2 X11 toolkit intrinsics library ii zlib1g 1:1.2.3-13 compression library - runtime Versions of packages fslview recommends: ii fsl-atlases 4.0.1-1 MNI152 standard space brain atlase ii fslview-doc 3.0+4.0.1-2~etch.apsy1 Documentation for FSLView -- no debconf information -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
