On Feb 13, 2008 6:50 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > On Feb 12, 2008 5:12 AM, Dirk Eddelbuettel <[EMAIL PROTECTED]> wrote: > > > > On 8 February 2008 at 19:22, Dirk Eddelbuettel wrote: > > | > > | On 9 February 2008 at 02:01, Ondrej Certik wrote: > > | | Package: libopenmpi-dev > > | | Version: 1.2.5-1 > > | | Severity: normal > > | | > > | | --- Please enter the report below this line. --- > > | | > > | | Hi, > > | | > > | | there seems to be a dead symlink in: > > | | > > | | $ ll /usr/lib/libmpi.so > > | | lrwxrwxrwx 1 root root 27 2008-02-09 01:56 /usr/lib/libmpi.so -> > > /etc/alternatives/libmpi.so > > | | > > | | It's on all of my computers. Some misconfiguration of > > update-alternatives on my side? > > | > > | Possibly so. All well here: > > | > > | [EMAIL PROTECTED]:~> ls -l /usr/lib/libmpi.so /etc/alternatives/libmpi.so > > | lrwxrwxrwx 1 root root 32 2008-01-20 19:42 /etc/alternatives/libmpi.so -> > > /usr/lib/openmpi/lib/libmpi.so.0 > > | lrwxrwxrwx 1 root root 27 2007-12-18 21:02 /usr/lib/libmpi.so -> > > /etc/alternatives/libmpi.so > > | [EMAIL PROTECTED]:~> > > | > > | and evidently on buildds using Open MPI. So please demonstrate how/why a > > | stray file on your system is/was caused by Open Mpi -- else I'll have to > > | close this for lack of any discernible evidence. > > > > As you didn't report anything reproducible, I am closing this. > > I did, see: > > http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=464795#15 > > Maybe the message ended up in your spam folder. I think this bug is not fixed.
Here is also a session in cowbuilder, that reproduces this problem: [EMAIL PROTECTED]:~$ sudo cowbuilder --login -> Copying COW directory -> Invoking pbuilder W: /home/ondra/.pbuilderrc does not exist -> Running in no-targz mode -> copying local configuration -> mounting /proc filesystem -> mounting /dev/pts filesystem -> policy-rc.d already exists Obtaining the cached apt archive contents -> entering the shell [EMAIL PROTECTED]:/# apt-get install openmpi-common Reading package lists... Done Building dependency tree Reading state information... Done The following NEW packages will be installed: openmpi-common 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 48.1kB of archives. After this operation, 233kB of additional disk space will be used. Get:1 http://ftp.cz.debian.org sid/main openmpi-common 1.2.5-1 [48.1kB] Fetched 48.1kB in 0s (318kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously deselected package openmpi-common. (Reading database ... 10121 files and directories currently installed.) Unpacking openmpi-common (from .../openmpi-common_1.2.5-1_all.deb) ... Setting up openmpi-common (1.2.5-1) ... [EMAIL PROTECTED]:/# apt-get install libopenmpi1 Reading package lists... Done Building dependency tree Reading state information... Done The following extra packages will be installed: adduser libgfortran2 libibverbs1 The following NEW packages will be installed: adduser libgfortran2 libibverbs1 libopenmpi1 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 1258kB/1465kB of archives. After this operation, 4792kB of additional disk space will be used. Do you want to continue [Y/n]? Get:1 http://ftp.cz.debian.org sid/main libgfortran2 4.2.3-1 [197kB] Get:2 http://ftp.cz.debian.org sid/main libopenmpi1 1.2.5-1 [1061kB] Fetched 1258kB in 2s (441kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously deselected package adduser. (Reading database ... 10172 files and directories currently installed.) Unpacking adduser (from .../archives/adduser_3.105_all.deb) ... Selecting previously deselected package libgfortran2. Unpacking libgfortran2 (from .../libgfortran2_4.2.3-1_i386.deb) ... Selecting previously deselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.1-1_i386.deb) ... Selecting previously deselected package libopenmpi1. Unpacking libopenmpi1 (from .../libopenmpi1_1.2.5-1_i386.deb) ... Setting up adduser (3.105) ... Setting up libgfortran2 (4.2.3-1) ... Setting up libibverbs1 (1.1.1-1) ... Setting up libopenmpi1 (1.2.5-1) ... [EMAIL PROTECTED]:/# apt-get install libopenmpi-dev Reading package lists... Done Building dependency tree Reading state information... Done The following NEW packages will be installed: libopenmpi-dev 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 447kB of archives. After this operation, 3281kB of additional disk space will be used. Get:1 http://ftp.cz.debian.org sid/main libopenmpi-dev 1.2.5-1 [447kB] Fetched 447kB in 1s (386kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously deselected package libopenmpi-dev. (Reading database ... 10353 files and directories currently installed.) Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.2.5-1_i386.deb) ... Setting up libopenmpi-dev (1.2.5-1) ... [EMAIL PROTECTED]:/# ls /usr/lib/libmpi.so /usr/lib/libmpi.so [EMAIL PROTECTED]:/# ls -l /usr/lib/libmpi.so lrwxrwxrwx 1 root root 27 Feb 13 17:56 /usr/lib/libmpi.so -> /etc/alternatives/libmpi.so [EMAIL PROTECTED]:/# ls -l /etc/alternatives/libmpi.so lrwxrwxrwx 1 root root 32 Feb 13 17:56 /etc/alternatives/libmpi.so -> /usr/lib/openmpi/lib/libmpi.so.0 [EMAIL PROTECTED]:/# ls -l /usr/lib/openmpi/lib/libmpi.so.0 ls: cannot access /usr/lib/openmpi/lib/libmpi.so.0: No such file or directory Please feel free to ask for more info. Are you able to reproduce it? If it's a bug in update-alternatives, it may well be that it happens in cowbuilder for me, but not for you. But I suggest to reopen this bug until we find the real cause of the problem. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
