On Sat, Jul 19, 2008 at 03:21:17PM +0200, Ondrej Certik wrote: > On Sat, Jul 19, 2008 at 3:19 PM, Ondrej Certik <[EMAIL PROTECTED]> wrote: > > On Sat, Jul 19, 2008 at 2:56 PM, Ólafur Jens Sigurðsson > > <[EMAIL PROTECTED]> wrote: > >> On Fri, Jul 18, 2008 at 11:16:20AM -0400, Adam C Powell IV wrote: > >> > >>> I don't have this problem with ex2, or any other example. Unfortunately > >>> the shlib is stripped so there are no symbols to check. :-( > >>> > >>> What's your architecture? It's fine on amd64. > >> > >> When I follow the example I get the following: > >> > >> g++ -I/usr/include/libmesh -I/usr/include/mpi -I/usr/include/petsc -c -o > >> ex2.o ex2.C > >> > >> so the first compile works fine > >> > >> g++ -o ex2 ex2.o -lmesh -lscotchmetis -lscotch -lscotcherr > >> ex2.o: In function main': > >> ex2.C:(.text+0x7c): undefined reference to lam_mpi_comm_world' > > > > ^^^^ This is weird. petsc is compiled against openmpi and libmesh > > should be too. > > > > I just tried on i386 and it works fine for me. Which architecture are > > you on? Do you have latest openmpi, petsc and libmesh and all > > depending packages from unstable installed? > > Please post the output of: > > [EMAIL PROTECTED]:~$ ll -d /usr/include/mpi > lrwxrwxrwx 1 root root 21 2008-03-09 14:58 /usr/include/mpi -> > /etc/alternatives/mpi > [EMAIL PROTECTED]:~$ ll -d /etc/alternatives/mpi > lrwxrwxrwx 1 root root 24 2008-07-03 12:41 /etc/alternatives/mpi -> > /usr/lib/openmpi/include > > On your system. Does it point to openmpi?
Ahaa ... it is not openmpi ... by some reason it is pointing to lam ls -ld /usr/include/mpi lrwxrwxrwx 1 root root 21 2007-11-22 19:06 /usr/include/mpi -> /etc/alternatives/mpi/ ls -ld /etc/alternatives/mpi lrwxrwxrwx 1 root root 16 2008-07-19 14:50 /etc/alternatives/mpi -> /usr/include/lam/ Oli -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
