On 11 October 2009 at 16:25, Arthur Marsh wrote: | | When I try to run prelink, I can't prelink /usr/lib/R/bin/exec/R | and prelink gives the error: | | /usr/sbin/prelink.bin: /usr/lib/R/bin/exec/R: Could not find one of the | dependencies | | $ ldd /usr/lib/R/bin/exec/R | linux-gate.so.1 => (0xffffe000) | libR.so => not found | libc.so.6 => /lib/i686/cmov/libc.so.6 (0x41f68000) | /lib/ld-linux.so.2 (0x41000000) | | $ locate libR.so | /usr/lib/R/lib/libR.so | | Is this a problem with R or with prelink?
I think with your use of R and prelink -- see what /usr/bin/R does, you need to at least define LD_LIBRARY_PATH for /usr/lib/R/lib/ to find libR.so, you probably also need to define R_HOME etc pp. So not a bug I think. Dirk | --- System Information: | Debian Release: squeeze/sid | APT prefers unstable | APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable') | Architecture: i386 (i686) | | Kernel: Linux 2.6.31-rc6 (SMP w/1 CPU core; PREEMPT) | Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8) | Shell: /bin/sh linked to /bin/bash | | Versions of packages r-base-core depends on: | ii libatlas3gf-base [libl 3.6.0-24 Automatically Tuned Linear Algebra | ii libblas3gf [libblas.so 1.2-2 Basic Linear Algebra Subroutines 3 | ii libbz2-1.0 1.0.5-3 high-quality block-sorting file co | ii libc6 2.9-27 GNU C Library: Shared libraries | ii libcairo2 1.8.8-2 The Cairo 2D vector graphics libra | ii libgfortran3 4.4.1-6 Runtime library for GNU Fortran ap | ii libglib2.0-0 2.22.2-2 The GLib library of C routines | ii libice6 2:1.0.5-1 X11 Inter-Client Exchange library | ii libjpeg62 6b-15 The Independent JPEG Group's JPEG | ii liblapack3gf [liblapac 3.2.1-2 library of linear algebra routines | ii libpango1.0-0 1.26.0-1 Layout and rendering of internatio | ii libpaper-utils 1.1.23+nmu1 library for handling paper charact | ii libpcre3 7.8-3 Perl 5 Compatible Regular Expressi | ii libpng12-0 1.2.40-1 PNG library - runtime | ii libreadline6 6.0-5 GNU readline and history libraries | ii libsm6 2:1.1.1-1 X11 Session Management library | ii libtiff4 3.9.1-1 Tag Image File Format (TIFF) libra | ii libx11-6 2:1.2.2-1 X11 client-side library | ii libxext6 2:1.0.4-1 X11 miscellaneous extension librar | ii libxss1 1:1.1.3-1 X11 Screen Saver extension library | ii libxt6 1:1.0.6-1 X11 toolkit intrinsics library | ii perl 5.10.1-5 Larry Wall's Practical Extraction | ii tcl8.5 8.5.7-1 Tcl (the Tool Command Language) v8 | ii tk8.5 8.5.7-1 Tk toolkit for Tcl and X11, v8.5 - | ii ucf 3.0022 Update Configuration File: preserv | ii unzip 6.0-1 De-archiver for .zip files | ii xdg-utils 1.0.2-6.1 desktop integration utilities from | ii zip 3.0-1 Archiver for .zip files | ii zlib1g 1:1.2.3.3.dfsg-15 compression library - runtime | | Versions of packages r-base-core recommends: | ii r-base-dev 2.9.2-4 GNU R installation of auxiliary GN | ii r-recommended 2.9.2-4 GNU R collection of recommended pa | | Versions of packages r-base-core suggests: | pn ess <none> (no description available) | ii r-base-html 2.9.2-4 GNU R html docs for statistical co | ii r-base-latex 2.9.2-4 GNU R LaTeX docs for statistical c | pn r-doc-info | r-doc-pdf | r-do <none> (no description available) | pn r-mathlib <none> (no description available) | | -- debconf-show failed | | -- Three out of two people have difficulties with fractions. -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
