Package: gmsh Version: 2.5.0.dfsg-2 Severity: normal Hi,
While running gmsh recently on my laptop, I noticed that it now requires MPI. The following MPI error message show a slight packing glitch. <error> $ gmsh --version [t43:08798] [[INVALID],INVALID] ORTE_ERROR_LOG: A system-required executable either could not be found or was not executable by this user in file ../../../../../../orte/mca/ess/singleton/ess_singleton_module.c at line 269 [t43:08798] [[INVALID],INVALID] ORTE_ERROR_LOG: A system-required executable either could not be found or was not executable by this user in file ../../../../../../orte/mca/ess/singleton/ess_singleton_module.c at line 143 [t43:08798] [[INVALID],INVALID] ORTE_ERROR_LOG: A system-required executable either could not be found or was not executable by this user in file ../../../orte/runtime/orte_init.c at line 132 -------------------------------------------------------------------------- It looks like orte_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during orte_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): orte_ess_set_name failed --> Returned value A system-required executable either could not be found or was not executable by this user (-127) instead of ORTE_SUCCESS -------------------------------------------------------------------------- -------------------------------------------------------------------------- It looks like MPI_INIT failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during MPI_INIT; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): ompi_mpi_init: orte_init failed --> Returned "A system-required executable either could not be found or was not executable by this user" (-127) instead of "Success" (0) -------------------------------------------------------------------------- *** The MPI_Init() function was called before MPI_INIT was invoked. *** This is disallowed by the MPI standard. *** Your MPI job will now abort. [t43:8798] Abort before MPI_INIT completed successfully; not able to guarantee that all other processes were killed! </error> Installing mpi-default-bin which gmsh recommends fixed the problem. Regards, ST -- System Information: Debian Release: squeeze/sid APT prefers unstable APT policy: (500, 'unstable'), (1, 'experimental') Architecture: i386 (i686) Kernel: Linux 2.6.36-trunk-686 (SMP w/1 CPU core) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/bash Versions of packages gmsh depends on: ii dpkg 1.15.8.6 Debian package management system ii install-info 4.13a.dfsg.1-6 Manage installed documentation in ii libatlas3gf-sse2 [libla 3.8.3-24 Automatically Tuned Linear Algebra ii libblas3gf [libblas.so. 1.2-8 Basic Linear Algebra Reference imp ii libc6 2.11.2-7 Embedded GNU C Library: Shared lib ii libcgns2 2.5.4-3 CFD General Notation System librar ii libfltk1.1 1.1.10-2+b1 Fast Light Toolkit - shared librar ii libgcc1 1:4.4.5-10 GCC support library ii libgfortran3 4.4.5-10 Runtime library for GNU Fortran ap ii libgl1-mesa-glx [libgl1 7.7.1-4 A free implementation of the OpenG ii libglu1-mesa [libglu1] 7.7.1-4 The OpenGL utility library (GLU) ii libgomp1 4.4.5-10 GCC OpenMP (GOMP) support library ii libjpeg62 6b1-1 The Independent JPEG Group's JPEG ii liblapack3gf [liblapack 3.2.2-1.2 library of linear algebra routines ii libopencascade-foundati 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopencascade-modeling 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopenmpi1.3 1.4.2-4 high performance message passing l ii libpng12-0 1.2.44-1 PNG library - runtime ii libscotch-5.1 5.1.8a.dfsg-2 programs and libraries for graph, ii libstdc++6 4.4.5-10 The GNU Standard C++ Library v3 ii libx11-6 2:1.3.3-4 X11 client-side library ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime Versions of packages gmsh recommends: ii mpi-default-bin 0.6 Standard MPI runtime programs gmsh suggests no packages. -- no debconf information -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
