Your message dated Thu, 04 Sep 2008 14:32:05 +0000 with message-id <[EMAIL PROTECTED]> and subject line Bug#496366: fixed in mafft 6.240-2 has caused the Debian Bug report #496366, regarding The possibility of attack with the help of symlinks in some Debian packages to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [EMAIL PROTECTED] immediately.) -- 496366: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=496366 Debian Bug Tracking System Contact [EMAIL PROTECTED] with problems
--- Begin Message ---Package: mafft Severity: grave Hi, maintainer! This message about the error concerns a few packages at once. I've tested all the packages (for Lenny) on my Debian mirror. All scripts of packages (marked as executable) were tested. In some packages I've discovered scripts with errors which may be used by a user for damaging important system files or user's files. For example if a script uses in its work a temp file which is created in /tmp directory, then every user can create symlink with the same name in this directory in order to destroy or rewrite some system or user file. Symlink attack may also lead not only to the data desctruction but to denial of service as well. Even if you create files or directories with help of function 'RANDOM' or pid(), then your system is not protected. Attacker can create many symlinks in order to destroy your data or create 'denial of service' for your package scripts. Even if you make rm(dir) for files/directories, then your system is not protected. Attacker can permanently create symlinks. This list is created with the help of script. This list is sorted by hand. Howewer in some cases mistake is possible. Please, Be understanding to possible mistakes. :) I set Severity into grave for this bug. The table of discovered problems is below. Discussion of this bug you can see in debian-devel@: http://lists.debian.org/debian-devel/2008/08/msg00271.html Binary-package: r-base-core-ra (1.1.1-1) file: /usr/lib/Ra/lib/R/bin/javareconf Binary-package: rccp (0.9-2) file: /usr/lib/rccp/delqueueask Binary-package: mafft (6.240-1) file: /usr/bin/mafft-homologs Binary-package: openoffice.org-common (1:2.4.1-6) file: /usr/lib/openoffice/program/senddoc Binary-package: crossfire-maps (1.11.0-1) file: /usr/share/games/crossfire/maps/Info/combine.pl Binary-package: sgml2x (1.0.0-11.1) file: /usr/bin/rlatex Binary-package: liguidsoap (0.3.6-4) file: /var/lib/liguidsoap/liguidsoap.py Binary-package: citadel-server (7.37-1) file: /usr/lib/citadel-server/migrate_aliases.sh Binary-package: ampache (3.4.1-1) file: /usr/share/ampache/www/locale/base/gather-messages.sh Binary-package: xen-utils-3.2-1 (3.2.1-2) file: /usr/lib/xen-3.2-1/bin/qemu-dm.debug Binary-package: dtc-common (0.29.6-1) file: /usr/share/dtc/admin/accesslog.php file: /usr/share/dtc/admin/sa-wrapper Binary-package: honeyd-common (1.5c-3) file: /usr/share/honeyd/scripts/test.sh Binary-package: lustre-tests (1.6.5-1) file: /usr/lib/lustre/tests/runiozone Binary-package: linuxtrade (3.65-8+b4) file: /usr/share/linuxtrade/bin/linuxtrade.bwkvol file: /usr/share/linuxtrade/bin/linuxtrade.wn file: /usr/share/linuxtrade/bin/moneyam.helper Binary-package: freevo (1.8.1-0) file: /usr/bin/freevo.real Binary-package: fml (4.0.3.dfsg-2) file: /usr/share/fml/libexec/mead.pl Binary-package: rkhunter (1.3.2-3) file: /usr/bin/rkhunter Binary-package: openswan (1:2.4.12+dfsg-1.1) file: /usr/lib/ipsec/livetest Binary-package: linux-patch-openswan (1:2.4.12+dfsg-1.1) file: /usr/src/kernel-patches/all/openswan/packaging/utils/maysnap file: /usr/src/kernel-patches/all/openswan/packaging/utils/maytest Binary-package: aptoncd (0.1-1.1) file: /usr/share/aptoncd/xmlfile.py Binary-package: cdcontrol (1.90-1.1) file: /usr/lib/cdcontrol/writtercontrol Binary-package: newsgate (1.6-23) file: /usr/bin/mkmailpost Binary-package: gpsdrive-scripts (2.10~pre4-3) file: /usr/bin/geo-code Binary-package: impose+ (0.2-11) file: /usr/bin/impose Binary-package: mgt (2.31-5) file: /usr/games/mailgo Binary-package: audiolink (0.05-1) file: /usr/bin/audiolink Binary-package: ibackup (2.27-4.1) file: /usr/bin/ibackup Binary-package: emacspeak (26.0-3) file: /usr/share/emacs/site-lisp/emacspeak/etc/extract-table.pl Binary-package: bk2site (1:1.1.9-3.1) file: /usr/lib/cgi-bin/bk2site/redirect.pl Binary-package: datafreedom-perl (0.1.7-1) file: /usr/bin/dfxml-invoice Binary-package: emacs-jabber (0.7.91-1) file: /usr/lib/emacsen-common/packages/install/emacs-jabber Binary-package: lmbench (3.0-a7-1) file: /usr/lib/lmbench/scripts/rccs file: /usr/lib/lmbench/scripts/STUFF Binary-package: rancid-util (2.3.2~a8-1) file: /var/lib/rancid/getipacctg Binary-package: ogle (0.9.2-5.2) file: /usr/lib/ogle/ogle_audio_debug file: /usr/lib/ogle/ogle_cli_debug file: /usr/lib/ogle/ogle_ctrl_debug file: /usr/lib/ogle/ogle_gui_debug file: /usr/lib/ogle/ogle_mpeg_ps_debug file: /usr/lib/ogle/ogle_mpeg_vs_debug file: /usr/lib/ogle/ogle_nav_debug file: /usr/lib/ogle/ogle_vout_debug Binary-package: firehol (1.256-4) file: /sbin/firehol Binary-package: aview (1.3.0rc1-8) file: /usr/bin/asciiview Binary-package: radiance (3R9+20080530-3) file: /usr/bin/optics2rad file: /usr/bin/pdelta file: /usr/bin/dayfact file: /usr/bin/raddepend Binary-package: vdr-dbg (1.6.0-5) file: /usr/bin/vdrleaktest Binary-package: ogle-mmx (0.9.2-5.2) file: /usr/lib/ogle/ogle_audio_debug file: /usr/lib/ogle/ogle_cli_debug file: /usr/lib/ogle/ogle_ctrl_debug file: /usr/lib/ogle/ogle_gui_debug file: /usr/lib/ogle/ogle_mpeg_ps_debug file: /usr/lib/ogle/ogle_mpeg_vs_debug file: /usr/lib/ogle/ogle_nav_debug file: /usr/lib/ogle/ogle_vout_debug Binary-package: convirt (0.8.2-3) file: /usr/share/convirt/image_store/_template_/provision.sh file: /usr/share/convirt/image_store/Linux_CD_Install/provision.sh file: /usr/share/convirt/image_store/Fedora_PV_Install/provision.sh file: /usr/share/convirt/image_store/CentOS_PV_Install/provision.sh file: /usr/share/convirt/image_store/common/provision.sh file: /usr/share/convirt/image_store/example/provision.sh file: /usr/share/convirt/image_store/Windows_CD_Install/provision.sh Binary-package: printfilters-ppd (2.13-9) file: /usr/lib/printfilters/master-filter Binary-package: r-base-core (2.7.1-1) file: /usr/lib/R/bin/javareconf file: /usr/lib/R/bin/javareconf.orig Binary-package: xmcd (2.6-19.3) file: /usr/share/xmcd/scripts/ncsarmt file: /usr/share/xmcd/scripts/ncsawrap Binary-package: tiger (1:3.2.2-3.1) file: /usr/lib/tiger/util/genmsgidx Binary-package: scilab-bin (4.1.2-5) file: /usr/lib/scilab-4.1.2/bin/scilink file: /usr/lib/scilab-4.1.2/util/scidoc file: /usr/lib/scilab-4.1.2/util/scidem Binary-package: dpkg-cross (2.3.0) file: /usr/share/dpkg-cross/bin/gccross Binary-package: ltp-network-test (20060918-2.1) file: /usr/lib/debian-test/tests/linux/testcases/bin/ftp_setup_vsftp_conf file: /usr/lib/debian-test/tests/linux/testcases/bin/nfs_fsstress.sh Binary-package: cman (2.20080629-1) file: /usr/sbin/fence_egenera Binary-package: scratchbox2 (1.99.0.24-1) file: /usr/share/scratchbox2/scripts/dpkg-checkbuilddeps file: /usr/share/scratchbox2/scripts/sb2-check-pkg-mappings Binary-package: sendmail-base (8.14.3-5) file: /usr/sbin/checksendmail file: /usr/bin/expn Binary-package: fwbuilder (2.1.19-3) file: /usr/bin/fwb_install Binary-package: sng (1.0.2-5) file: /usr/bin/sng_regress Binary-package: dist (1:3.5-17-1) file: /usr/bin/patcil file: /usr/bin/patdiff Binary-package: sympa (5.3.4-5) file: /usr/lib/cgi-bin/sympa/wwsympa.fcgi file: /usr/lib/sympa/bin/sympa.pl Binary-package: postfix (2.5.2-2) file: /usr/lib/postfix_groups.pl Binary-package: caudium (3:1.4.12-11) file: /usr/share/caudium/configvar Binary-package: mgetty-fax (1.1.36-1.2) file: /usr/bin/faxspool Binary-package: aegis (4.24-3) file: /usr/share/doc/aegis/examples/remind/bng_dvlpd.sh file: /usr/share/doc/aegis/examples/remind/bng_rvwd.sh file: /usr/share/doc/aegis/examples/remind/awt_dvlp.sh file: /usr/share/doc/aegis/examples/remind/awt_intgrtn.sh Binary-package: aegis-web (4.24-3) file: /usr/lib/cgi-bin/aegis.cgi Binary-package: digitaldj (0.7.5-6+b1) file: /usr/share/digitaldj/fest.pl Binary-package: mon (0.99.2-12) file: /usr/lib/mon/alert.d/test.alert Binary-package: feta (1.4.16) file: /usr/share/feta/plugins/to-upgrade Binary-package: arb-common (0.0.20071207.1-4) file: /usr/lib/arb/SH/arb_fastdnaml file: /usr/lib/arb/SH/dszmconnect.pl Binary-package: qemu (0.9.1-5) file: /usr/sbin/qemu-make-debian-root Binary-package: apertium (3.0.7+1-1+b1) file: /usr/bin/apertium-gen-deformat file: /usr/bin/apertium-gen-reformat file: /usr/bin/apertium Binary-package: xcal (4.1-18.3) file: /usr/bin/pscal Binary-package: myspell-tools (1:3.1-20) file: /usr/bin/i2myspell Binary-package: gccxml (0.9.0+cvs20080525-1) file: /usr/share/gccxml-0.9/MIPSpro/find_flags Binary-package: freeradius-dialupadmin (2.0.4+dfsg-4) file: /usr/share/freeradius-dialupadmin/bin/backup_radacct file: /usr/share/freeradius-dialupadmin/bin/clean_radacct file: /usr/share/freeradius-dialupadmin/bin/monthly_tot_stats file: /usr/share/freeradius-dialupadmin/bin/tot_stats file: /usr/share/freeradius-dialupadmin/bin/truncate_radacct Binary-package: dhis-server (5.3-1) file: /usr/lib/dhis-server/dhis-dummy-log-engine Binary-package: wims (3.62-13) file: /var/lib/wims/public_html/bin/coqweb file: /var/lib/wims/bin/account.sh Binary-package: initramfs-tools (0.92f) file: /usr/share/initramfs-tools/init Binary-package: realtimebattle-common (1.0.8-7) file: /usr/lib/realtimebattle/Robots/perl.robot Binary-package: netmrg (0.20-1) file: /usr/bin/rrdedit Binary-package: bulmages-servers (0.11.1-2) file: /usr/share/bulmages/examples/scripts/actualizabulmacont file: /usr/share/bulmages/examples/scripts/installbulmages-db file: /usr/share/bulmages/examples/scripts/creabulmafact file: /usr/share/bulmages/examples/scripts/creabulmacont file: /usr/share/bulmages/examples/scripts/actualizabulmafact Binary-package: xastir (1.9.2-1) file: /usr/lib/xastir/get-maptools.sh file: /usr/lib/xastir/get_shapelib.sh Binary-package: plait (1.5.2-1) file: /usr/bin/plaiter file: /usr/bin/plait Binary-package: cdrw-taper (0.4-2) file: /usr/sbin/amlabel-cdrw Binary-package: konwert-filters (1.8-11.1) file: /usr/share/konwert/filters/any-UTF8 Binary-package: gdrae (0.1-1) file: /usr/bin/gdrae Binary-package: lazarus-src (0.9.24-0-9) file: /usr/lib/lazarus/tools/install/create_lazarus_export_tgz.sh
--- End Message ---
--- Begin Message ---Source: mafft Source-Version: 6.240-2 We believe that the bug you reported is fixed in the latest version of mafft, which is due to be installed in the Debian FTP archive: mafft_6.240-2.diff.gz to pool/main/m/mafft/mafft_6.240-2.diff.gz mafft_6.240-2.dsc to pool/main/m/mafft/mafft_6.240-2.dsc mafft_6.240-2_amd64.deb to pool/main/m/mafft/mafft_6.240-2_amd64.deb A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [EMAIL PROTECTED], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Charles Plessy <[EMAIL PROTECTED]> (supplier of updated mafft package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [EMAIL PROTECTED]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Mon, 25 Aug 2008 23:30:20 +0900 Source: mafft Binary: mafft Architecture: source amd64 Version: 6.240-2 Distribution: unstable Urgency: high Maintainer: Debian-Med Packaging Team <[EMAIL PROTECTED]> Changed-By: Charles Plessy <[EMAIL PROTECTED]> Description: mafft - Multiple alignment program for amino acid or nucleotide sequences Closes: 496366 Changes: mafft (6.240-2) unstable; urgency=high . [ Charles Plessy ] * debian/control: - Moved the Homepage: field out from the package's description. - Enhances: t-coffee. * Updated my email address. * Securisation of the temorary files of mafft-homologs: - debian/control: build-depend on quilt. - debian/rules: modified to use quilt. - debian/README.source: signals that the package uses quilt. - debian/patches: added a patch to use non-guessable temporary files (Closes: #496366). Thanks to Dmitry E. Oboukhov for finding the bug, Thijs Kinkhorst for preliminary, Kazutaka Katoh for the final implementation, and Michael Schutte for the final review. - debian/mafft-homologs.1*, debian/README.Debian: document that the program is patched. . [ David Paleino ] * debian/mafft.1, debian/mafft-homologs.1 added - manpages built statically. * debian/control: - B-D updated (see above) - added myself to Uploaders - moved XS-Vcs-* fields to Vcs-* - Updated to Standards-Version 3.7.3 (no changes needed) * debian/rules: - reflecting static build of manpages - minor changes Checksums-Sha1: 10910d283ebe60abd4daa0c23c7176080d92ab66 1301 mafft_6.240-2.dsc d005a67f688b17c4f9712477ead2fe73b261ed93 11463 mafft_6.240-2.diff.gz dfbbc28ff23a84ac8cf1db185b521eb4809a0446 2141648 mafft_6.240-2_amd64.deb Checksums-Sha256: 51fec526aff16ae73c61af5faa21525bf40162fd6558efa4cc308a0040dff79c 1301 mafft_6.240-2.dsc 5382de083844691b00f64263d49f7465110456d5a069a2dd71b2dfb35d89b7c6 11463 mafft_6.240-2.diff.gz 6f02cf7128018b671b7f36d45a664e0c75751432610179c2ffa2873224f42911 2141648 mafft_6.240-2_amd64.deb Files: 986bd9ca1a5ab63ef4abc1b726cb3854 1301 science optional mafft_6.240-2.dsc 0c0dd3e97b085852d1cbb6e2168f9d24 11463 science optional mafft_6.240-2.diff.gz ebe53fee218af9a465acc3fdfec39f09 2141648 science optional mafft_6.240-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.9 (GNU/Linux) iEYEARECAAYFAki/7XoACgkQdYl1krr+x/K3OQCfc4PvpEL3AHYMPJOBne9+z/31 U0MAn1T01fdzF4HA/sN86jnFyq/FEm6h =pVmN -----END PGP SIGNATURE-----
--- End Message ---
