Your message dated Sat, 19 Sep 2009 12:47:19 +0000
with message-id <[email protected]>
and subject line Bug#533794: fixed in pymol 1.2r1-1
has caused the Debian Bug report #533794,
regarding pymol: non-standard gcc/g++ used for build (gcc-4.2)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
533794: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=533794
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: pymol
Severity: important
User: [email protected]
Usertags: non-standard-compiler, gcc-4.2
This package builds with a non standard compiler version; please check
if this package can be built with the default version of gcc/g++.
Please keep this report open until the package uses the default
compiler version for the package build.
The severity of this report is likely to be raised before the release.
--- End Message ---
--- Begin Message ---
Source: pymol
Source-Version: 1.2r1-1
We believe that the bug you reported is fixed in the latest version of
pymol, which is due to be installed in the Debian FTP archive:
pymol_1.2r1-1.diff.gz
to pool/main/p/pymol/pymol_1.2r1-1.diff.gz
pymol_1.2r1-1.dsc
to pool/main/p/pymol/pymol_1.2r1-1.dsc
pymol_1.2r1-1_i386.deb
to pool/main/p/pymol/pymol_1.2r1-1_i386.deb
pymol_1.2r1.orig.tar.gz
to pool/main/p/pymol/pymol_1.2r1.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <[email protected]> (supplier of updated pymol package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: RIPEMD160
Format: 1.8
Date: Sat, 19 Sep 2009 13:43:04 +0200
Source: pymol
Binary: pymol
Architecture: source i386
Version: 1.2r1-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team <[email protected]>
Changed-By: Michael Banck <[email protected]>
Description:
pymol - Molecular Graphics System
Closes: 506967 511810 516040 529417 533794 535410 543702
Changes:
pymol (1.2r1-1) unstable; urgency=low
.
* New upstream release.
.
[ Michael Banck ]
* debian/patches/06_remove_shebang.dpatch: Removed, applied upstream.
* debian/patches/13_activate_vmd_plugin.dpatch: Updated.
* debian/patches/14_script_not_executable.dpatch: Removed, applied upstream.
* debian/patches/16_pymem_del.dpatch: Likewise.
* debian/patches/17_cmyk_png_data_path.dpatch: Updated.
* debian/pymol.launch.in: Add quotes around $* to not fail on filenames with
whitespace in them (closes: #506967).
* debian/rules (clean): Removed bashism (closes: #535410).
* debian/control (Homepage): Updated.
* debian/control (Uploaders): Removed Li Daobing.
* debian/patches/18_enable_gl_shaders.dpatch: New patch, enable OpenGL
shaders, taken from upstream.
* debian/pymol.launch.in: Do not add $* to command line if empty, avoiding a
traceback on startup.
* debian/rules (GCC43_ICES_HERE): Removed.
* debian/control (Build-Depends): Removed g++-4.2 on arm and armel
(closes: #533794).
* debian/control (Build-Depends): Replaced glutg3-dev with freeglut3-dev
(closes: #543702).
.
[ Daniel Leidert ]
* debian/control: Added DM-Upload-Allowed field.
(Standards-Version): Bumped to 3.8.3.
(Vcs-Svn): Fixed vcs-field-uses-not-recommended-uri-format.
(Description): Fixed typo (thanks to lintian).
* debian/pymol-32.xpm: Renamed to debian/pymol.xpm.
* debian/pymol.applications,
debian/gnome-pymol.keys,
debian/gnome-pymol.mime: Dropped. This is for GNOME<=2.4.
* debian/pymol.dirs,
debian/pymol.install: Added for debhelper-based build system.
* debian/pymol.doc-base: Added to register reference card.
* debian/pymol.menu (icon): Fixed after rename.
* debian/pymol.launch.in: Fixed PYMOL_PATH (closes: #529417). Make this
self-detecting (closes: #516040).
* debian/rules: Reworked to be more debhelper-like and clean. Permission
fixes have been dropped (fixed upstream).
* debian/README.source: Added to comply to policy.
* debian/patches/04_Rules.make.dpatch: Dropped.
* debian/patches/05_examples_data_path.dpatch: Adjusted to use PYMOL_DATA.
* debian/patches/19_blosum_matrix_path.dpatch: Added.
- modules/pymol/fitting.py: Search for the matrices in the correct path
(closes: #511810).
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Files:
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