Your message dated Thu, 24 Feb 2011 03:33:58 +0000
with message-id <[email protected]>
and subject line Bug#614491: fixed in slicer 3.6.3~svn16075-1
has caused the Debian Bug report #614491,
regarding slicer: FTBFS: itkConceptChecking.h:681: error: conversion from
'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar type
'itk::Concept::Detail::UniqueType_bool<false>' requested
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
614491: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=614491
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: slicer
Version: 3.4.0~svn10438-7
Severity: serious
Tags: squeeze sid
User: [email protected]
Usertags: qa-ftbfs-20110221 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part:
> make[3]: Entering directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [ 4%] Building CXX object
> Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkMimxAbaqusFileWriter.o
> [ 4%] Building CXX object Libs/Qdec/CMakeFiles/Qdec.dir/QdecGlmFitResults.o
> [ 4%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceWFileReader.o
> [ 4%] Building CXX object Libs/Qdec/CMakeFiles/Qdec.dir/QdecSubject.o
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:
> In member function 'void
> vtkMimxAbaqusFileWriter::WriteBoundaryConditions(std::ostream&,
> vtkUnstructuredGrid*)':
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:673:
> warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared
> at /usr/include/vtk-5.6/vtkMath.h:946)
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:688:
> warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared
> at /usr/include/vtk-5.6/vtkMath.h:946)
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:703:
> warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared
> at /usr/include/vtk-5.6/vtkMath.h:946)
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by
> `bin/libQdec.so.3.4.0'. Stop.
> make[3]: *** Waiting for unfinished jobs....
> [ 4%] [ 4%] Building CXX object
> Libs/Qdec/CMakeFiles/Qdec.dir/QdecUtilities.o
> Building CXX object
> Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkMimxIntervertebralDiscAbaqusWriter.o
> [ 4%] Linking CXX shared library ../../bin/libModuleDescriptionParser.so
> Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceLabelReader.o
> make[3]: Leaving directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> make[2]: *** [Libs/Qdec/CMakeFiles/Qdec.dir/all] Error 2
> make[2]: *** Waiting for unfinished jobs....
> [ 4%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSLookupTable.o
> [ 4%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSIOTcl.o
> make[3]: Leaving directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [ 4%] Built target ModuleDescriptionParser
> [ 4%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemEstimateDiffusionTensor.o
> [ 4%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderSeries.o
> [ 4%] Building CXX object
> Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkPluginFilterWatcher.o
> [ 5%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageWriter.o
> [ 5%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceReaderTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by
> `bin/libmimxMeshIO.so.3.4.0'. Stop.
> make[3]: *** Waiting for unfinished jobs....
> [ 5%] Building CXX object
> Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/ModuleProcessInformation.o
> [ 5%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceAnnotationReaderTcl.o
> [ 5%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceScalarReaderTcl.o
> make[2]: make[3]: Leaving directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> *** [Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/all] Error 2
> [ 5%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorGlyph.o
> [ 5%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceWFileReaderTcl.o
> [ 5%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceLabelReaderTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by
> `bin/libFreeSurfer.so.3.4.0'. Stop.
> make[3]: *** Waiting for unfinished jobs....
> [ 5%] [ 6%] Building CXX object
> Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSLookupTableTcl.o
> Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/FreeSurferInit.o
> [ 6%] [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPolyDataTensorToColor.o
> Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkBSplineInterpolateImageFunction.o
> [ 6%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKGradientAnisotropicDiffusionImageFilter.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperPointandArray.o
> make[3]: Leaving directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> make[2]: *** [Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/all] Error 2
> [ 6%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKDistanceTransform.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineDTMRI.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineTeem.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamline.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlinePoints.o
> [ 6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkSeedTracts.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorImplicitFunctionToFunctionSet.o
> [ 6%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTractographyPointAndArray.o
> [ 6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorMask.o
> [ 6%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKLevelTracingImageFilter.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorRotate.o
> [ 7%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKLevelTracing3DImageFilter.o
> [ 7%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKWandImageFilter.o
> [ 7%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKNewOtsuThresholdImageFilter.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkImageLabelCombine.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkNRRDReaderTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkNRRDWriterTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorMathematicsTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorMathematicsSimpleTcl.o
> [ 7%] [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemEstimateDiffusionTensorTcl.o
> Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorGlyphTcl.o
> [ 7%] [ 7%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKBSplineTransform.o
> Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPolyDataTensorToColorTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkBSplineInterpolateImageFunctionTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineDTMRITcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineTeemTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlineTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlinePointsTcl.o
> [ 7%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKTimeSeriesDatabase.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkSeedTractsTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorImplicitFunctionToFunctionSetTcl.o
> [ 7%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorMaskTcl.o
> [ 8%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKIslandMath.o
> [ 8%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorRotateTcl.o
> [ 8%] Building CXX object
> Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkImageLabelCombineTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by
> `bin/libvtkTeem.so.3.4.0'. Stop.
> make[3]: *** Waiting for unfinished jobs....
> [ 9%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemInit.o
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesReaderTcl.o
> make[2]: *** [Libs/vtkTeem/CMakeFiles/vtkTeem.dir/all] Error 2
> make[3]: Leaving directory
> `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [ 9%] [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesScalarReaderTcl.o
> Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderFileTcl.o
> In file included from /usr/include/InsightToolkit/Common/itkMath.h:28,
> from /usr/include/InsightToolkit/Common/itkIndex.h:24,
> from /usr/include/InsightToolkit/Common/itkImageRegion.h:25,
> from /usr/include/InsightToolkit/Common/itkImageBase.h:25,
> from /usr/include/InsightToolkit/Common/itkImage.h:20,
> from
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:23:
> /usr/include/InsightToolkit/Common/itkConceptChecking.h: In member function
> 'void itk::Concept::IsInteger<T>::Constraints::constraints() [with T =
> double]':
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:686: instantiated
> from 'itk::Concept::IsInteger<double>'
> /usr/include/InsightToolkit/BasicFilters/itkConnectedComponentImageFilter.h:140:
> instantiated from 'itk::ConnectedComponentImageFilter<itk::Image<double,
> 3u>, itk::Image<double, 3u>, itk::Image<double, 3u> >'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:108:
> instantiated from 'void vtkITKIslandMathExecute(vtkITKIslandMath*,
> vtkImageData*, vtkImageData*, T*, T*) [with T =
> vtkITKIslandMath::SimpleExecute::VTK_TT]'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:171:
> instantiated from here
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:681: error:
> conversion from 'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar
> type 'itk::Concept::Detail::UniqueType_bool<false>' requested
> /usr/include/InsightToolkit/Common/itkConceptChecking.h: In member function
> 'void itk::Concept::IsInteger<T>::Constraints::constraints() [with T =
> float]':
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:686: instantiated
> from 'itk::Concept::IsInteger<float>'
> /usr/include/InsightToolkit/BasicFilters/itkConnectedComponentImageFilter.h:140:
> instantiated from 'itk::ConnectedComponentImageFilter<itk::Image<float,
> 3u>, itk::Image<float, 3u>, itk::Image<float, 3u> >'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:108:
> instantiated from 'void vtkITKIslandMathExecute(vtkITKIslandMath*,
> vtkImageData*, vtkImageData*, T*, T*) [with T =
> vtkITKIslandMath::SimpleExecute::VTK_TT]'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:172:
> instantiated from here
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:681: error:
> conversion from 'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar
> type 'itk::Concept::Detail::UniqueType_bool<false>' requested
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderSeriesTcl.o
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageWriterTcl.o
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterTcl.o
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilter2DFFTcl.o
> [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterFFTcl.o
> [ 9%] [ 9%] Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterFULTcl.o
> Building CXX object
> Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterULULTcl.o
> make[3]: *** [Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKIslandMath.o] Error 1
The full build log is available from:
http://people.debian.org/~lucas/logs/2011/02/21/slicer_3.4.0~svn10438-7_lsid64.buildlog
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot. Internet was not
accessible from the build systems.
--
| Lucas Nussbaum
| [email protected] http://www.lucas-nussbaum.net/ |
| jabber: [email protected] GPG: 1024D/023B3F4F |
--- End Message ---
--- Begin Message ---
Source: slicer
Source-Version: 3.6.3~svn16075-1
We believe that the bug you reported is fixed in the latest version of
slicer, which is due to be installed in the Debian FTP archive:
libslicer3-dev_3.6.3~svn16075-1_amd64.deb
to main/s/slicer/libslicer3-dev_3.6.3~svn16075-1_amd64.deb
libslicer3_3.6.3~svn16075-1_amd64.deb
to main/s/slicer/libslicer3_3.6.3~svn16075-1_amd64.deb
slicer-data_3.6.3~svn16075-1_all.deb
to main/s/slicer/slicer-data_3.6.3~svn16075-1_all.deb
slicer_3.6.3~svn16075-1.debian.tar.gz
to main/s/slicer/slicer_3.6.3~svn16075-1.debian.tar.gz
slicer_3.6.3~svn16075-1.dsc
to main/s/slicer/slicer_3.6.3~svn16075-1.dsc
slicer_3.6.3~svn16075-1_amd64.deb
to main/s/slicer/slicer_3.6.3~svn16075-1_amd64.deb
slicer_3.6.3~svn16075.orig.tar.gz
to main/s/slicer/slicer_3.6.3~svn16075.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Dominique Belhachemi <[email protected]> (supplier of updated slicer package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Sat, 19 Feb 2011 22:57:09 -0500
Source: slicer
Binary: slicer libslicer3 libslicer3-dev slicer-data
Architecture: source all amd64
Version: 3.6.3~svn16075-1
Distribution: unstable
Urgency: low
Maintainer: Debian Science Team
<[email protected]>
Changed-By: Dominique Belhachemi <[email protected]>
Description:
libslicer3 - software package for visualization and image analysis - runtime
libslicer3-dev - software package for visualization and image analysis -
developme
slicer - software package for visualization and image analysis - main appl
slicer-data - software package for visualization and image analysis - share
Closes: 591413 599096 614491
Changes:
slicer (3.6.3~svn16075-1) unstable; urgency=low
.
* Upload to unstable (Closes: #599096, #614491)
* New upstream release
* slicer depends now on slicer-data (= ${source:Version}) (Closes: #591413)
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Files:
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slicer_3.6.3~svn16075-1.debian.tar.gz
8b1f0477a31a2860383bd8a430f5f48e 109297818 doc optional
slicer-data_3.6.3~svn16075-1_all.deb
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libslicer3_3.6.3~svn16075-1_amd64.deb
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