Source: objcryst-fox
Version: 1.9.0.2-1
Severity: serious
Tags: wheezy sid
User: [email protected]
Usertags: qa-ftbfs-20110502 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> g++  -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/xray_scattering/it1992.cpp 
> -o cctbx/eltbx/xray_scattering/it1992.o
> In file included from include/boost/config.hpp:57:0,
>                  from include/scitbx/array_family/error.h:7,
>                  from include/scitbx/array_family/ref.h:4,
>                  from include/scitbx/array_family/tiny_plain.h:4,
>                  from include/scitbx/array_family/tiny.h:4,
>                  from include/scitbx/array_family/shared_plain.h:31,
>                  from include/scitbx/array_family/shared.h:4,
>                  from include/cctbx/eltbx/xray_scattering/form_factor.h:4,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:4,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/boost/config/suffix.hpp:460:18: warning: ISO C++ 1998 does not 
> support 'long long' [-Wlong-long]
> include/boost/config/suffix.hpp:461:18: warning: ISO C++ 1998 does not 
> support 'long long' [-Wlong-long]
> In file included from include/scitbx/array_family/tiny_plain.h:5:0,
>                  from include/scitbx/array_family/tiny.h:4,
>                  from include/scitbx/array_family/shared_plain.h:31,
>                  from include/scitbx/array_family/shared.h:4,
>                  from include/cctbx/eltbx/xray_scattering/form_factor.h:4,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:4,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/detail/misc.h: In function 'OutputElementType* 
> scitbx::af::uninitialized_copy_typeconv(const InputElementType*, const 
> InputElementType*, OutputElementType*)':
> include/scitbx/array_family/detail/misc.h:113:12: error: 'uninitialized_copy' 
> is not a member of 'std'
> In file included from include/scitbx/array_family/shared.h:4:0,
>                  from include/cctbx/eltbx/xray_scattering/form_factor.h:4,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:4,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/shared_plain.h: In constructor 
> 'scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&)':
> include/scitbx/array_family/shared_plain.h:126:9: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/shared_plain.h: In constructor 
> 'scitbx::af::shared_plain<ElementType>::shared_plain(const size_type&, const 
> ElementType&)':
> include/scitbx/array_family/shared_plain.h:140:9: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/shared_plain.h: In constructor 
> 'scitbx::af::shared_plain<ElementType>::shared_plain(const ElementType*, 
> const ElementType*)':
> include/scitbx/array_family/shared_plain.h:158:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/shared_plain.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::reserve(const size_type&)':
> include/scitbx/array_family/shared_plain.h:283:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> In file included from include/scitbx/array_family/shared_plain.h:301:0,
>                  from include/scitbx/array_family/shared.h:4,
>                  from include/cctbx/eltbx/xray_scattering/form_factor.h:4,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:4,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::assign(const size_type&, const 
> ElementType&)':
> include/scitbx/array_family/detail/push_back_etc.h:8:11: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:13:11: error: 
> 'uninitialized_fill' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::assign(const ElementType*, const 
> ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:28:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:34:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::insert(ElementType*, const 
> ElementType*, const ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:93:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:100:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:102:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::extend(const ElementType*, const 
> ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:119:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::insert(ElementType*, const size_type&, 
> const ElementType&)':
> include/scitbx/array_family/detail/push_back_etc.h:134:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:140:13: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:142:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> In file included from include/scitbx/array_family/shared.h:4:0,
>                  from include/cctbx/eltbx/xray_scattering/form_factor.h:4,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:4,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/shared_plain.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::m_insert_overflow(ElementType*, const 
> size_type&, const ElementType&, bool)':
> include/scitbx/array_family/shared_plain.h:315:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/shared_plain.h:326:11: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/shared_plain.h:330:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/shared_plain.h: In member function 'void 
> scitbx::af::shared_plain<ElementType>::m_insert_overflow(ElementType*, const 
> ElementType*, const ElementType*)':
> include/scitbx/array_family/shared_plain.h:342:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/shared_plain.h:344:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/shared_plain.h:346:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> In file included from include/scitbx/array_family/small.h:4:0,
>                  from include/scitbx/math/gaussian/sum.h:9,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:5,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/small_plain.h: In constructor 
> 'scitbx::af::small_plain<ElementType, N>::small_plain(const size_type&)':
> include/scitbx/array_family/small_plain.h:25:9: error: 'uninitialized_fill_n' 
> is not a member of 'std'
> include/scitbx/array_family/small_plain.h: In constructor 
> 'scitbx::af::small_plain<ElementType, N>::small_plain(const size_type&, const 
> ElementType&)':
> include/scitbx/array_family/small_plain.h:40:9: error: 'uninitialized_fill_n' 
> is not a member of 'std'
> include/scitbx/array_family/small_plain.h: In constructor 
> 'scitbx::af::small_plain<ElementType, N>::small_plain(const ElementType*, 
> const ElementType*)':
> include/scitbx/array_family/small_plain.h:58:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/small_plain.h: In copy constructor 
> 'scitbx::af::small_plain<ElementType, N>::small_plain(const 
> scitbx::af::small_plain<ElementType, N>&)':
> include/scitbx/array_family/small_plain.h:76:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> include/scitbx/array_family/small_plain.h: In member function 
> 'scitbx::af::small_plain<ElementType, N>& 
> scitbx::af::small_plain<ElementType, N>::operator=(const 
> scitbx::af::small_plain<ElementType, N>&)':
> include/scitbx/array_family/small_plain.h:95:9: error: 'uninitialized_copy' 
> is not a member of 'std'
> In file included from include/scitbx/array_family/small_plain.h:118:0,
>                  from include/scitbx/array_family/small.h:4,
>                  from include/scitbx/math/gaussian/sum.h:9,
>                  from include/cctbx/eltbx/xray_scattering/gaussian.h:5,
>                  from include/cctbx/eltbx/xray_scattering.h:5,
>                  from cctbx/eltbx/xray_scattering/it1992.cpp:1:
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::small_plain<ElementType, N>::assign(const size_type&, const 
> ElementType&)':
> include/scitbx/array_family/detail/push_back_etc.h:8:11: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:13:11: error: 
> 'uninitialized_fill' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::small_plain<ElementType, N>::assign(const ElementType*, const 
> ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:28:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:34:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::small_plain<ElementType, N>::insert(ElementType*, const 
> ElementType*, const ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:93:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:100:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:102:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::small_plain<ElementType, N>::extend(const ElementType*, const 
> ElementType*)':
> include/scitbx/array_family/detail/push_back_etc.h:119:11: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h: In member function 'void 
> scitbx::af::small_plain<ElementType, N>::insert(ElementType*, const 
> size_type&, const ElementType&)':
> include/scitbx/array_family/detail/push_back_etc.h:134:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:140:13: error: 
> 'uninitialized_fill_n' is not a member of 'std'
> include/scitbx/array_family/detail/push_back_etc.h:142:13: error: 
> 'uninitialized_copy' is not a member of 'std'
> make[3]: *** [cctbx/eltbx/xray_scattering/it1992.o] Error 1

The full build log is available from:
   
http://people.debian.org/~lucas/logs/2011/05/02/objcryst-fox_1.9.0.2-1_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.

-- 
| Lucas Nussbaum
| [email protected]   http://www.lucas-nussbaum.net/ |
| jabber: [email protected]             GPG: 1024D/023B3F4F |



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