Hi, the problem is fixed in Git - no reason to spend time in further tagging + checking versions etc. Will upload until noon.
Thanks for all your work in these tests!! Andreas. On Fri, Sep 13, 2013 at 04:15:10AM +0200, Andreas Beckmann wrote: > Package: grinder,libbio-perl-perl > Version: 1.6.920-1 > Severity: serious > User: [email protected] > Usertags: edos-file-overwrite > > Architecture: amd64 > Distribution: sid > > Hi, > > automatic installation tests of packages that share a file and at the > same time do not conflict by their package dependency relationships has > detected the following problem: > > Selecting previously unselected package grinder. > Unpacking grinder (from .../grinder_0.5.3-2_all.deb) ... > dpkg: error processing /var/cache/apt/archives/grinder_0.5.3-2_all.deb > (--unpack): > trying to overwrite > '/usr/share/man/man3/Bio::SeqFeature::Amplicon.3pm.gz', which is also in > package libbio-perl-perl 1.6.920-1 > dpkg-deb: error: subprocess paste was killed by signal (Broken pipe) > > This is a serious bug as it makes installation fail, and violates > sections 7.6.1 and 10.1 of the policy. An optimal solution would > consist in only one of the packages installing that file, and renaming > or removing the file in the other package. Depending on the > circumstances you might also consider Replace relations or file > diversions. If the conflicting situation cannot be resolved then, as a > last resort, the two packages have to declare a mutual > Conflict. Please take into account that Replaces, Conflicts and > diversions should only be used when packages provide different > implementations for the same functionality. > > Here is a list of files that are known to be shared by both packages > (according to the Contents file for sid/amd64, which may be > slightly out of sync): > > usr/share/man/man3/Bio::DB::IndexedBase.3pm.gz > usr/share/man/man3/Bio::Seq::SimulatedRead.3pm.gz > usr/share/man/man3/Bio::SeqFeature::Amplicon.3pm.gz > usr/share/man/man3/Bio::SeqFeature::SubSeq.3pm.gz > usr/share/man/man3/Bio::Tools::AmpliconSearch.3pm.gz > usr/share/perl5/Bio/DB/IndexedBase.pm > usr/share/perl5/Bio/Seq/SimulatedRead.pm > usr/share/perl5/Bio/SeqFeature/Amplicon.pm > usr/share/perl5/Bio/SeqFeature/SubSeq.pm > usr/share/perl5/Bio/Tools/AmpliconSearch.pm > > This bug is assigned to both packages. If you, the maintainers of > the two packages in question, have agreed on which of the packages will > resolve the problem please reassign the bug to that package. You may > also register in the BTS that the other package is affected by the bug. > > Cheers, > > Andreas > > PS: for more information about the detection of file overwrite errors > of this kind see http://edos.debian.net/file-overwrites/. > _______________________________________________ > Debian-med-packaging mailing list > [email protected] > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging -- http://fam-tille.de -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
