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and subject line Bug#338899: fixed in ghemical 1.91-1
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Form: Giovanni Ridolfi <[EMAIL PROTECTED]>
To: Debian Bug Tracking System <[EMAIL PROTECTED]>
Subject: ghemical: ppc ghemical 1.90-2 segmentaion fault
Message-Id: <[EMAIL PROTECTED]>
From: Giovanni Ridolfi <[EMAIL PROTECTED]>
Date: Sun, 13 Nov 2005 18:32:42 +0100
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Package: ghemical
Version: 1.90-2
Severity: grave
Ghemical 1.90-2
When I run ghemical from a gnometerm and try to draw a molecule the
program seg-faults.
This is the output I pasted from the gnometerm:
$ ghemical
OpenGL extension version - 1.2
WARNING : SetCurrent() called before widget was realized ; skipping...
GL is not yet initialized -> skipping light setup!
added local light.
WARNING : SetCurrent() called before widget was realized ; skipping...
WARNING : Update() called before widget was realized ; skipping...
InitGL : setting up lights for cam 0
draw state is 1
orbit_xy skipped ; counter = 1
current element is now C
Segmentation fault
Giovanni
-- System Information:
Debian Release: testing/unstable
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: powerpc (ppc)
Shell: /bin/sh linked to /bin/bash
Kernel: Linux 2.6.12-1-powerpc
Locale: [EMAIL PROTECTED], [EMAIL PROTECTED] (charmap=ISO-8859-15)
Versions of packages ghemical depends on:
ii atlas3-altivec [liblapac 3.6.0-20 Automatically Tuned Linear Algebra
ii atlas3-base [liblapack.s 3.6.0-20 Automatically Tuned Linear Algebra
ii freeglut3 2.2.0-8.1 OpenGL Utility Toolkit
ii lapack3 [liblapack.so.3] 3.0.20000531a-6 library of linear algebra routines
ii libatk1.0-0 1.10.3-1 The ATK accessibility toolkit
ii libc6 2.3.5-6 GNU C Library: Shared libraries an
ii libg2c0 1:3.4.4-9 Runtime library for GNU Fortran 77
ii libgcc1 1:4.0.2-3 GCC support library
ii libghemical0 1.90-1 Molecular Modelling Library
ii libglade2-0 1:2.5.1-2 library to load .glade files at ru
ii libglib2.0-0 2.8.3-1 The GLib library of C routines
ii libglu1-xorg [libglu1] 6.8.2.dfsg.1-9 Mesa OpenGL utility library [X.Org
ii libgtk2.0-0 2.6.10-1 The GTK+ graphical user interface
ii libgtkglext1 1.0.6-2 OpenGL Extension to GTK (shared li
ii libice6 6.8.2.dfsg.1-10 Inter-Client Exchange library
ii libopenbabel0c2 1.100.2-3 Convert and manipulate chemical da
ii libpango1.0-0 1.8.2-3 Layout and rendering of internatio
ii libsc6c2 2.2.3-2 The Scientific Computing Toolkit
ii libsm6 6.8.2.dfsg.1-10 X Window System Session Management
ii libstdc++6 4.0.2-3 The GNU Standard C++ Library v3
ii libx11-6 6.8.2.dfsg.1-10 X Window System protocol client li
ii libxext6 6.8.2.dfsg.1-10 X Window System miscellaneous exte
ii libxi6 6.8.2.dfsg.1-10 X Window System Input extension li
ii libxml2 2.6.22-2 GNOME XML library
ii libxmu6 6.8.2.dfsg.1-10 X Window System miscellaneous util
ii libxt6 6.8.2.dfsg.1-10 X Toolkit Intrinsics
ii mpqc 2.2.3-2 The Massively Parallel Quantum Che
ii refblas3 [libblas.so.3] 1.2-8 Basic Linear Algebra Subroutines 3
ii xlibmesa-gl [libgl1] 6.8.2.dfsg.1-10 Mesa 3D graphics library [X.Org]
ii xlibs 6.8.2.dfsg.1-10 X Window System client libraries m
ii zlib1g 1:1.2.3-6 compression library - runtime
ghemical recommends no packages.
-- no debconf information
---------------------------------------
Received: (at 338899-close) by bugs.debian.org; 30 Nov 2005 02:11:12 +0000
>From [EMAIL PROTECTED] Tue Nov 29 18:11:12 2005
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From: Michael Banck <[EMAIL PROTECTED]>
To: [EMAIL PROTECTED]
X-Katie: $Revision: 1.60 $
Subject: Bug#338899: fixed in ghemical 1.91-1
Message-Id: <[EMAIL PROTECTED]>
Sender: Archive Administrator <[EMAIL PROTECTED]>
Date: Tue, 29 Nov 2005 18:02:10 -0800
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autolearn=no version=2.60-bugs.debian.org_2005_01_02
Source: ghemical
Source-Version: 1.91-1
We believe that the bug you reported is fixed in the latest version of
ghemical, which is due to be installed in the Debian FTP archive:
ghemical_1.91-1.diff.gz
to pool/main/g/ghemical/ghemical_1.91-1.diff.gz
ghemical_1.91-1.dsc
to pool/main/g/ghemical/ghemical_1.91-1.dsc
ghemical_1.91-1_i386.deb
to pool/main/g/ghemical/ghemical_1.91-1_i386.deb
ghemical_1.91.orig.tar.gz
to pool/main/g/ghemical/ghemical_1.91.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [EMAIL PROTECTED],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <[EMAIL PROTECTED]> (supplier of updated ghemical package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [EMAIL PROTECTED])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Wed, 16 Nov 2005 00:56:11 +0100
Source: ghemical
Binary: ghemical
Architecture: source i386
Version: 1.91-1
Distribution: unstable
Urgency: low
Maintainer: Michael Banck <[EMAIL PROTECTED]>
Changed-By: Michael Banck <[EMAIL PROTECTED]>
Description:
ghemical - A GNOME molecular modelling environment
Closes: 273314 338899
Changes:
ghemical (1.91-1) unstable; urgency=low
.
* New upstream release.
+ No longer segfaults when drawing atoms; closes: #338899.
+ Adds correct number of hydrogens to nitrogen atoms;
closes: #273314.
* Sync with Ubuntu.
* debian/rules (configure-stamp): Removed obsolete --enable-mpqc
option.
* debian/control (Build-Depends): Add versioned Build-Depends on
libghemical-dev 1.91-1, libsc-dev 2.3.0-1 and libopenbabel-dev
1.100.2-4 for the C++ allocator transition.
* debian/control (Build-Depends): Added pkg-config.
* debian/patches/07_object_protected: Removed, no longer needed.
* debian/patches/08_gcc-4.0: Likewise.
* debian/patches/10_64bit_glu_fix: Likewise.
* debian/patches/91_aclocal_configure: Regenerated.
* debian/rules (configure-stamp): Explicitely tell configure where
pkg-config is located by adding PKG_CONFIG to its environment.
* debian/rules (configure-stamp): Add --enable-threads to configure
arguments.
Files:
2c371611911cc74cc1dece32d7e13f52 792 gnome optional ghemical_1.91-1.dsc
e9c40239e2b7cde3ee2a4119d3f0fde4 1389116 gnome optional
ghemical_1.91.orig.tar.gz
51ff716e13832c168e1f77215e4500a4 50148 gnome optional ghemical_1.91-1.diff.gz
61d8b4a583d1105508ce29d6e35269a4 1345954 gnome optional
ghemical_1.91-1_i386.deb
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