Source: ncbi-blast+ Version: 2.2.29-1 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20140628 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 > -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security > -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE > -D_FILE_OFFSET_BITS=64 -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE > -I/build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/BUILD/inc > -I/build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/src/corelib/ncbi_os_unix.cpp > -o ncbi_os_unix.o > In file included from /usr/include/c++/4.9/bits/shared_ptr.h:52:0, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbistl.hpp:219, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbistre.hpp:40, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbi_stack.hpp:35, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbidiag.hpp:42, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/error_codes.hpp:38, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/src/corelib/ncbi_os_unix.cpp:33: > /usr/include/c++/4.9/bits/shared_ptr_base.h: In member function 'virtual > void* std::_Sp_counted_deleter<_Ptr, _Deleter, _Alloc, > _Lp>::_M_get_deleter(const std::type_info&)': > /usr/include/c++/4.9/bits/shared_ptr_base.h:479:39: error: must #include > <typeinfo> before using typeid > return __ti == typeid(_Deleter) ? &_M_impl._M_del() : nullptr; > ^ > /usr/include/c++/4.9/bits/shared_ptr_base.h: In member function 'virtual > void* std::_Sp_counted_ptr_inplace<_Tp, _Alloc, _Lp>::_M_get_deleter(const > std::type_info&)': > /usr/include/c++/4.9/bits/shared_ptr_base.h:543:40: error: must #include > <typeinfo> before using typeid > if (__ti == typeid(_Sp_make_shared_tag)) > ^ > /usr/include/c++/4.9/bits/shared_ptr_base.h: In constructor > 'std::__shared_ptr<_Tp, _Lp>::__shared_ptr(std::_Sp_make_shared_tag, const > _Alloc&, _Args&& ...)': > /usr/include/c++/4.9/bits/shared_ptr_base.h:1094:50: error: must #include > <typeinfo> before using typeid > void* __p = _M_refcount._M_get_deleter(typeid(__tag)); > ^ > In file included from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbistl.hpp:219:0, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbistre.hpp:40, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbi_stack.hpp:35, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/ncbidiag.hpp:42, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/include/corelib/error_codes.hpp:38, > from > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/src/corelib/ncbi_os_unix.cpp:33: > /usr/include/c++/4.9/bits/shared_ptr.h: In function '_Del* > std::get_deleter(const std::__shared_ptr<_Tp2, _Lp>&)': > /usr/include/c++/4.9/bits/shared_ptr.h:79:63: error: must #include <typeinfo> > before using typeid > return static_cast<_Del*>(__p._M_get_deleter(typeid(_Del))); > ^ > /build/ncbi-blast+-zNoIe0/ncbi-blast+-2.2.29/c++/BUILD/build/Makefile.rules:50: > recipe for target 'ncbi_os_unix.o' failed > make[3]: *** [ncbi_os_unix.o] Error 1 The full build log is available from: http://aws-logs.debian.net/ftbfs-logs/2014/06/28/ncbi-blast+_2.2.29-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. -- To UNSUBSCRIBE, email to debian-bugs-rc-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org