Your message dated Fri, 29 Aug 2014 09:21:27 +0000 with message-id <[email protected]> and subject line Bug#759182: fixed in dolfin 1.4.0+dfsg-3 has caused the Debian Bug report #759182, regarding dolfin: FTBFS on mips(el) and sparc: MPI inconsistency to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 759182: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=759182 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: dolfin Version: 1.4.0+dfsg-2 Severity: serious Justification: fails to build from source (but built successfully in the past) Builds of dolfin on mips, mipsel, and sparc have all been failing: In file included from /usr/lib/petscdir/3.4.2/include/petscsys.h:96:0, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/common/types.h:29, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/function/Function.h:34, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/ale/MeshDisplacement.h:28, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/mesh/Mesh.h:38, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/mesh/Cell.h:33, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/mesh/MeshColoring.cpp:32: /usr/lib/openmpi/include/mpi.h:319:37: error: conflicting declaration 'typedef struct ompi_communicator_t* MPI_Comm' typedef struct ompi_communicator_t *MPI_Comm; ^ In file included from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/common/utils.h:33:0, from /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/mesh/MeshColoring.cpp:27: /«BUILDDIR»/dolfin-1.4.0+dfsg/dolfin/common/MPI.h:42:13: note: previous declaration as 'typedef int MPI_Comm' typedef int MPI_Comm; ^ In all three cases, debian/rules tries to disable MPI because these architectures historically used the LAM implementation, but PETSc proceeds to include real OpenMPI headers, leading to those errors. Could you please take alook? Thanks!
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--- Begin Message ---Source: dolfin Source-Version: 1.4.0+dfsg-3 We believe that the bug you reported is fixed in the latest version of dolfin, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Johannes Ring <[email protected]> (supplier of updated dolfin package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.8 Date: Fri, 29 Aug 2014 08:28:19 +0200 Source: dolfin Binary: libdolfin-dev libdolfin1.4 libdolfin1.4-dbg python-dolfin python-dolfin-dbg dolfin-doc dolfin-bin Architecture: source amd64 all Version: 1.4.0+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Team <[email protected]> Changed-By: Johannes Ring <[email protected]> Description: dolfin-bin - Executable scripts for DOLFIN dolfin-doc - Documentation and demo programs for DOLFIN libdolfin-dev - Shared links and header files for DOLFIN libdolfin1.4 - Shared libraries for DOLFIN libdolfin1.4-dbg - Shared libraries with debugging symbols for DOLFIN python-dolfin - Python interface for DOLFIN python-dolfin-dbg - Python extension modules for DOLFIN with debugging symbols Closes: 759182 759183 Changes: dolfin (1.4.0+dfsg-3) unstable; urgency=medium . * debian/rules: Enable MPI on mips(el) and sparc (closes: #759182). * debian/control: - Disable libcgal-dev on {hurd, kfreebsd}-i386 since it requires unreasonable amounts of memory (closes: #759183). - Disable libpetsc3.4.2-dev and libslepc3.4.2-dev on amr64 since they are not available on this architecture. 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