Your message dated Sat, 11 Jul 2015 06:49:56 +0000
with message-id <e1zdobk-00027e...@franck.debian.org>
and subject line Bug#792058: fixed in python-cobra 0.4.0b1-2
has caused the Debian Bug report #792058,
regarding python3-cobra: SyntaxError: invalid syntax (2.x-isms)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
792058: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=792058
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python3-cobra
Version: 0.4.0b1-1
Severity: grave
Justification: renders package unusable (uninstallable)
Byte compilation of python3-cobra is failing due to the presence of
syntax that was only valid in Python 2.x:
Setting up python3-cobra (0.4.0b1-1) ...
File "/usr/lib/python3/dist-packages/cobra/solvers/glpk_solver_java.py",
line 86
except Exception, e1:
^
SyntaxError: invalid syntax
File "/usr/lib/python3/dist-packages/cobra/solvers/cplex_solver_java.py",
line 318
print '%s failed: %s'%(solver_name, status)
^
SyntaxError: invalid syntax
File "/usr/lib/python3/dist-packages/cobra/solvers/gurobi_solver_java.py",
line 73
except Exception, e:
^
SyntaxError: invalid syntax
dpkg: error processing package python3-cobra (--configure):
subprocess installed post-installation script returned error exit status 1
Could you please take a look?
Thanks!
--- End Message ---
--- Begin Message ---
Source: python-cobra
Source-Version: 0.4.0b1-2
We believe that the bug you reported is fixed in the latest version of
python-cobra, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 792...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Afif Elghraoui <a...@ghraoui.name> (supplier of updated python-cobra package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 10 Jul 2015 18:35:52 -0700
Source: python-cobra
Binary: python-cobra python3-cobra python-cobra-data
Architecture: source all amd64
Version: 0.4.0b1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Afif Elghraoui <a...@ghraoui.name>
Description:
python-cobra - constraint-based modeling of biological networks (Python 2)
python-cobra-data - constraint-based modeling of biological networks (data)
python3-cobra - constraint-based modeling of biological networks (Python 3)
Closes: 792058
Changes:
python-cobra (0.4.0b1-2) unstable; urgency=medium
.
* Add more recommended packages in d/control
* Add suggestion of jython for python-cobra
* Really remove jython files from python3-package.
Thanks to Aaron Ucko for the bug report (Closes: 792058)
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python-cobra_0.4.0b1-2.debian.tar.xz
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python-cobra_0.4.0b1-2_amd64.deb
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python3-cobra_0.4.0b1-2_amd64.deb
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