Your message dated Tue, 15 Sep 2015 10:00:23 +0000
with message-id <[email protected]>
and subject line Bug#793885: fixed in libminc 2.3.00-1
has caused the Debian Bug report #793885,
regarding minc: FTBFS with netcdf in experimental due to test failure
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
793885: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=793885
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: minc
Version: 2.2.00-6
Severity: normal
Tags: patch
User: [email protected]
Usertags: netcdf-split-c-f-cxx
Dear Maintainer,
Your package FTBFS with the new netcdf packages in experimental due to a
test failure:
FAIL: testminctools.sh
==============================================
minc 2.2.00: libsrc2/test/test-suite.log
==============================================
# TOTAL: 17
# PASS: 16
# SKIP: 0
# XFAIL: 0
# FAIL: 1
# XPASS: 0
# ERROR: 0
.. contents:: :depth: 2
FAIL: testminctools.sh
======================
Converted file to MINC2.0 format.
ncvarid: ncid 65536: NetCDF: Variable not found
Version: 1 (netCDF)
FAIL testminctools.sh (exit status: 3)
The attached patch enables verbose test output in the build log and ignores
any test failures to allow the build to succeed.
Can you explain the test failure, and perhaps help resolve it?
I'd rather fix the issue than ignore the test failure, but I'm too
unfamiliar with the minc package.
Kind Regards,
Bas
diff -ruN ../minc-2.2.00_debian.orig/rules debian/rules
--- ../minc-2.2.00_debian.orig/rules 2015-07-28 16:05:46.618764813 +0200
+++ debian/rules 2015-07-28 16:13:41.740314813 +0200
@@ -17,10 +17,16 @@
DEB_CONFIGURE_EXTRA_FLAGS = --enable-shared --enable-minc2 --enable-acr-nema CFLAGS="$(CFLAGS)"
+# Verbose test output
+export VERBOSE=1
+
override_dh_auto_configure:
dh_auto_configure -- $(DEB_CONFIGURE_EXTRA_FLAGS)
+override_dh_auto_test:
+ dh_auto_test || echo "Ignoring test failures"
+
ps_docs = doc/prog_ref.ps doc/prog_guide.ps volume_io/Documentation/volume_io.ps
doc/prog_ref.ps doc/prog_guide.ps:
--- End Message ---
--- Begin Message ---
Source: libminc
Source-Version: 2.3.00-1
We believe that the bug you reported is fixed in the latest version of
libminc, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Steve M. Robbins <[email protected]> (supplier of updated libminc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 12 Sep 2015 19:20:21 -0500
Source: libminc
Binary: libminc2-4.0.0 libminc-dev
Architecture: source amd64
Version: 2.3.00-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Steve M. Robbins <[email protected]>
Description:
libminc-dev - MNI medical image format development environment
libminc2-4.0.0 - MNI medical image format library
Closes: 793885
Changes:
libminc (2.3.00-1) unstable; urgency=medium
.
* New upstream. Contains library source only. New minc-tools source
package will build minc-tools.
- Fixed to build with NetCDF 4.4. Closes: #793885.
Checksums-Sha1:
b19383452d53ec7d2d78fc328f79acd668724e02 2115 libminc_2.3.00-1.dsc
9c5d38d127569ea30c0685bc1f9dd8fa49884aa3 785675 libminc_2.3.00.orig.tar.gz
e525b8c87d9a54e0a8be44d1ca4e7c87146a8bec 6596 libminc_2.3.00-1.debian.tar.xz
42972091a9a668d02f3ed213cea8fdca528f7eca 70946 libminc-dev_2.3.00-1_amd64.deb
24a6d3e0445281988eb4f295998a72dbf3cb9f90 232538
libminc2-4.0.0_2.3.00-1_amd64.deb
Checksums-Sha256:
4b2159121047f8b5d4d9d23d23fad2a77fd7188adb32fa9080ed8097f5993bc6 2115
libminc_2.3.00-1.dsc
8c00e0383575ace1f941a5b35b99678db2a0dd5e023f8671d25debc949c7cf12 785675
libminc_2.3.00.orig.tar.gz
41ce612a0ba1e376659ade2abb8a4c4c36ba1ca5f99f261a8a31cb0038e20389 6596
libminc_2.3.00-1.debian.tar.xz
9b05330441f3f7313dd490876bfbe285586568e8c0f57eb289c10489165cd495 70946
libminc-dev_2.3.00-1_amd64.deb
247588ca5e4ec6d95c802e2069c9a9e1742b19523d5236379848d752a78c88c7 232538
libminc2-4.0.0_2.3.00-1_amd64.deb
Files:
3386a80f3c39712e6ebc30bba90c9511 2115 science optional libminc_2.3.00-1.dsc
e84c9330f07290869f7416116a395c17 785675 science optional
libminc_2.3.00.orig.tar.gz
16ec4725509dae411d7141f8a1fa9863 6596 science optional
libminc_2.3.00-1.debian.tar.xz
315a2e44bb649eee381ddb30fcffa0f6 70946 libdevel optional
libminc-dev_2.3.00-1_amd64.deb
690e17cb138f1055ce1a9661a2c8bc60 232538 libs optional
libminc2-4.0.0_2.3.00-1_amd64.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1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=ayQn
-----END PGP SIGNATURE-----
--- End Message ---