Your message dated Thu, 4 Feb 2016 15:58:04 +0200
with message-id <[email protected]>
and subject line Re: molds: FTBFS: /usr//lib//liblapacke.so: undefined
reference to `cgejsv_'
has caused the Debian Bug report #810230,
regarding molds: FTBFS: /usr//lib//liblapacke.so: undefined reference to
`cgejsv_'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
810230: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=810230
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: molds
Version: 0.3.1-1
Severity: serious
Justification: fails to build from source
User: [email protected]
Usertags: ftbfs
X-Debbugs-Cc: [email protected]
Dear Maintainer,
molds fails to build from source in unstable/amd64:
[..]
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o
obj/OptimizerFactory.o base/factories/OptimizerFactory.cpp -g -Wall -fopenmp
-O2 -fopenmp -c
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/MolDS.o
base/MolDS.cpp -g -Wall -fopenmp -O2 -fopenmp -c
mpicxx -I/usr/include/mpi -I/usr/lib/openblas-base//include/ -o obj/Main.o
Main.cpp -g -Wall -fopenmp -O2 -fopenmp -c
mpicxx -o molds -Wl,-rpath=/usr//lib/ -Wl,-rpath=/usr/lib/openblas-base
obj/Enums.o obj/PrintController.o obj/MolDSException.o
obj/MallocerFreer.o
obj/MpiProcess.o obj/AsyncCommunicator.o obj/Blas.o
obj/Lapack.o obj/Utilities.o obj/MathUtilities.o obj/EularAngle.o
obj/Parameters.o obj/Atom.o obj/Hatom.o obj/Liatom.o
obj/Catom.o obj/Natom.o obj/Oatom.o
obj/Satom.o obj/EnvironmentalPointCharge.o
obj/AtomFactory.o obj/Molecule.o obj/InputParser.o
obj/GTOExpansionSTO.o obj/RealSphericalHarmonicsIndex.o
obj/MOLogger.o obj/DensityLogger.o
obj/HoleDensityLogger.o obj/ParticleDensityLogger.o
obj/Cndo2.o obj/Indo.o
obj/ZindoS.o obj/Mndo.o obj/Am1.o obj/Am1D.o obj/Pm3.o obj/Pm3D.o
obj/Pm3Pddg.o obj/ElectronicStructureFactory.o obj/MD.o obj/MC.o
obj/RPMD.o obj/NASCO.o obj/Optimizer.o
obj/ConjugateGradient.o obj/SteepestDescent.o obj/BFGS.o
obj/GEDIIS.o obj/OptimizerFactory.o obj/MolDS.o
obj/Main.o -L/usr//lib/ -L/usr/lib/openblas-base -lstdc++ -lm -lpthread -lgomp
-L/usr/lib/lapack/ -llapacke -lmpi -lmpi_cxx -lboost_serialization -lboost_mpi
-lboost_thread -lboost_system -lopenblas
/usr//lib//liblapacke.so: undefined reference to `cgejsv_'
/usr//lib//liblapacke.so: undefined reference to `zggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `cggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `sgghd3_'
/usr//lib//liblapacke.so: undefined reference to `cggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgghd3_'
/usr//lib//liblapacke.so: undefined reference to `cgges3_'
/usr//lib//liblapacke.so: undefined reference to `cgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `zgesvj_'
/usr//lib//liblapacke.so: undefined reference to `dgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `zggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `sggev3_'
/usr//lib//liblapacke.so: undefined reference to `zggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `spotrf2_'
/usr//lib//liblapacke.so: undefined reference to `sgges3_'
/usr//lib//liblapacke.so: undefined reference to `sgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `zpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `dggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `dgghd3_'
/usr//lib//liblapacke.so: undefined reference to `dggev3_'
/usr//lib//liblapacke.so: undefined reference to `zgejsv_'
/usr//lib//liblapacke.so: undefined reference to `sbdsvdx_'
/usr//lib//liblapacke.so: undefined reference to `dpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `sggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `dgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `dgges3_'
/usr//lib//liblapacke.so: undefined reference to `zgges3_'
/usr//lib//liblapacke.so: undefined reference to `dbdsvdx_'
/usr//lib//liblapacke.so: undefined reference to `zgetrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgesvj_'
/usr//lib//liblapacke.so: undefined reference to `sgesvdx_'
/usr//lib//liblapacke.so: undefined reference to `sggsvd3_'
/usr//lib//liblapacke.so: undefined reference to `dggsvp3_'
/usr//lib//liblapacke.so: undefined reference to `cpotrf2_'
/usr//lib//liblapacke.so: undefined reference to `cgghd3_'
collect2: error: ld returned 1 exit status
Makefile_GNU:43: recipe for target 'molds' failed
make[2]: *** [molds] Error 1
make[2]: Leaving directory
'/home/lamby/temp/cdt.20160107143305.87JDA1KenV/molds-0.3.1/src'
debian/rules:31: recipe for target 'override_dh_auto_build' failed
make[1]: *** [override_dh_auto_build] Error 2
make[1]: Leaving directory
'/home/lamby/temp/cdt.20160107143305.87JDA1KenV/molds-0.3.1'
debian/rules:24: recipe for target 'build' failed
make: *** [build] Error 2
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` [email protected] / chris-lamb.co.uk
`-
molds.0.3.1-1.unstable.amd64.log.txt.gz
Description: Binary data
--- End Message ---
--- Begin Message ---
Fixed in openblas 0.2.15-1+b1 (Rebuild against LAPACK 3.6.0)
--- End Message ---
