Your message dated Sat, 06 Feb 2016 13:43:13 +0000 with message-id <e1as38r-0002yh...@franck.debian.org> and subject line Bug#813498: fixed in scalapack 1.8.0-12.2 has caused the Debian Bug report #813498, regarding scalapack FTBFS with openmpi1.10; patch included to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 813498: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=813498 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: scalapack Severity: important Tags: patch Attached is a patch for scalapack to build against openmpi1.10. Note that this really also requires: (1) depend on pkg-config (2) build-depend on mpi-default-dev/openmpi >= 1.10.2 (See #813494) -- System Information: Debian Release: 8.2 APT prefers stable-updates APT policy: (500, 'stable-updates'), (500, 'stable') Architecture: i386 (i686) Kernel: Linux 3.16.0-4-686-pae (SMP w/1 CPU core) Locale: LANG=en_IE.UTF-8, LC_CTYPE=en_IE.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_IE.UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system)diff -urN scalapack-1.8.0/debian/changelog scalapack-1.8.0.new/debian/changelog --- scalapack-1.8.0/debian/changelog 2015-03-10 09:10:28.000000000 +0000 +++ scalapack-1.8.0.new/debian/changelog 2016-02-01 19:50:02.115258698 +0000 @@ -1,3 +1,10 @@ +scalapack (1.8.0-12.2) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Fix for openmpi1.10 transition: Use pkg-config mpi-fort --libs + + -- Alastair McKinstry <mckins...@debian.org> Mon, 01 Feb 2016 19:49:43 +0000 + scalapack (1.8.0-12.1) unstable; urgency=medium * Non-maintainer upload. diff -urN scalapack-1.8.0/debian/patches/01_SLmake.inc.patch scalapack-1.8.0.new/debian/patches/01_SLmake.inc.patch --- scalapack-1.8.0/debian/patches/01_SLmake.inc.patch 2011-12-25 18:56:52.000000000 +0000 +++ scalapack-1.8.0.new/debian/patches/01_SLmake.inc.patch 2016-02-01 19:28:21.720189006 +0000 @@ -9,12 +9,12 @@ +ifeq ($(MPI),openmpi) +USEMPI = -DUsingMpiBlacs +ifeq ($(BUILD),static) -+SMPLIB = -L/usr/lib/openmpi/lib/ -lmpi -lmpi_f77 ++SMPLIB = $$(pkg-config mpi-fort --libs) +BLACSFINIT = /usr/lib/libblacsF77init-openmpi.a +BLACSCINIT = /usr/lib/libblacsCinit-openmpi.a +BLACSLIB = /usr/lib/libblacs-openmpi.a +else -+SMPLIB = -L/usr/lib/openmpi/lib/ -lmpi -lmpi_f77 ++SMPLIB = $$(pkg-config mpi-fort --libs) +BLACSFINIT = -lblacsF77init-openmpi +BLACSCINIT = -lblacsCinit-openmpi +BLACSLIB = -lblacs-openmpi diff -urN scalapack-1.8.0/debian/rules scalapack-1.8.0.new/debian/rules --- scalapack-1.8.0/debian/rules 2015-03-10 09:08:06.000000000 +0000 +++ scalapack-1.8.0.new/debian/rules 2016-02-01 19:20:30.194770251 +0000 @@ -49,7 +49,7 @@ ar x ../$${i}_openmpi.a ;\ cd .. ;\ gcc -shared -Wl,-soname=lib$$i-openmpi.so.$(version_major) -o \ - lib$$i-openmpi.so.$(version) tmp/*.o -lblas -llapack -lblacsCinit-openmpi -lblacs-openmpi -L/usr/lib/openmpi/lib -lmpi -lmpi_f77 -lgfortran;\ + lib$$i-openmpi.so.$(version) tmp/*.o -lblas -llapack -lblacsCinit-openmpi -lblacs-openmpi $$(pkg-config mpi-fort --libs) -lgfortran;\ ln -snf lib$$i-openmpi.so.$(version) lib$$i-openmpi.so.$(version_major) ;\ ln -snf lib$$i-openmpi.so.$(version_major) lib$$i-openmpi.so ;\ rm tmp/* ;\
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--- Begin Message ---Source: scalapack Source-Version: 1.8.0-12.2 We believe that the bug you reported is fixed in the latest version of scalapack, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 813...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Mattia Rizzolo <mat...@debian.org> (supplier of updated scalapack package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 05 Feb 2016 14:31:30 +0000 Source: scalapack Binary: libscalapack-openmpi1 libscalapack-mpich1 libscalapack-mpi-dev scalapack-mpi-test libscalapack-pvm1 libscalapack-pvm-dev scalapack-pvm-test scalapack-test-common Architecture: source Version: 1.8.0-12.2 Distribution: unstable Urgency: medium Maintainer: Muammar El Khatib <muam...@debian.org> Changed-By: Mattia Rizzolo <mat...@debian.org> Description: libscalapack-mpi-dev - Scalable Linear Algebra Package - Dev. files for MPICH libscalapack-mpich1 - Scalable Linear Algebra Package - Shared libs. for MPICH libscalapack-openmpi1 - Scalable Linear Algebra Package - Shared libs. for OpenMPI libscalapack-pvm-dev - Scalable Linear Algebra Package - Dev. files for PVM libscalapack-pvm1 - Scalable Linear Algebra Package - Shared libs. for PVM scalapack-mpi-test - Scalable Linear Algebra Package - Test files for MPICH scalapack-pvm-test - Scalable Linear Algebra Package - Test files for PVM scalapack-test-common - Test data for ScaLAPACK testers Closes: 813498 Changes: scalapack (1.8.0-12.2) unstable; urgency=medium . * Non-maintainer upload. * Fix for openmpi1.10 transition: Use `pkg-config mpi-fort --libs`. Origian patch by Alastair McKinstry. Closes: #813498 Checksums-Sha1: 18c5b8e6560001d282aedb9c68a271992960da3d 2806 scalapack_1.8.0-12.2.dsc 9475117b33cca620dc631602c519b2e8e3e00c8e 13800 scalapack_1.8.0-12.2.debian.tar.xz Checksums-Sha256: 5c19151d57db8ca67ded488fb641b3fe922af989f87c30e305f5938737fdf146 2806 scalapack_1.8.0-12.2.dsc 07f2a37a7e6a261ff6a9e35fd5e9530f451e1cc95977fdd83ba3e9f7dc427b5e 13800 scalapack_1.8.0-12.2.debian.tar.xz Files: 546b2b4516bee629b19258b7c2237de2 2806 devel extra scalapack_1.8.0-12.2.dsc 199a0a384ff06c3ff24e06605b594f15 13800 devel extra scalapack_1.8.0-12.2.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJWtLJMAAoJEEsEP825REVAPsQQAK+kPn4fLPqKtukkUjeUVZae T5Igr95p4rAEYRYl43Pue8mDQ9XXgkh9BmWTi33UAK7YcsntiTFPKR/WuKXsEccZ RhZA5ftgXLgI0547HSKogJL5GXLOa4DJWPsU866dpEwfbdddD+Lz4UqjurQ0x/4O F5XV9DNP5WENV6uYYnxj48/en2CTcmiajgKSq8nVaCybTOOdGLJO9vLZeTzZzFaa l80kwNcmw4sQ3c3og8NilVK2zJaRAEhrYoPCkDCeEcuyeZ8HjRK/2vDo67VoGnqY 5ODKckqMniByzhp+VSJmWxJd9QC0yx/GXk1Lhnftf2J19xIKlA/6FB5TnO4oHIJj NtCX1f4r1nEJyJhtYKoyrZQp9q7yf/YUZeZD1pwvihpbLqUuXr6NXZo7bvIETOZi k0KxrMMcKLS3GpnrN6/WuQc5ojapVwbQOwrVf3YHUgX84jmEv6LNuwlUHlXB+H/Y 64GcUbZUWx1x9wB9PoLSorzB6jHrvv/gIen/PMeFRoDSn5px/UqaPkPSw/3uEo7c mp1Yw9HqirxtkPxi7KdmfrNVvokFNn0iaSVSDtOtgrvSEsUYn2R+VbLBIECwjruV LXo6WlfuYue0Ief0yeUBTnV161EBpudFaAg3OS41SVcLEOuUW9mXRjbA2X72r5Nh IKyhKtyF/j+fa0FX8klH =Ux19 -----END PGP SIGNATURE-----
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