Control: retitle -1 pymc FTBFS with test failure: ValueError: size is not compatible with inputs
On Mon, Dec 19, 2016 at 10:11:33PM +0100, Lucas Nussbaum wrote: >... > During a rebuild of all packages in sid, your package failed to build on > amd64. > > Relevant part (hopefully): > > make[1]: Entering directory '/<<BUILDDIR>>/pymc-2.2+ds' > > dh_auto_clean > > dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) > > python setup.py clean -a > > /usr/lib/python2.7/dist-packages/numpy/distutils/system_info.py:572: > > UserWarning: > > Atlas (http://math-atlas.sourceforge.net/) libraries not found. > > Directories to search for the libraries can be specified in the > > numpy/distutils/site.cfg file (section [atlas]) or by setting > > the ATLAS environment variable. > > self.calc_info() > > /usr/bin/ld: cannot find -lcblas > > collect2: error: ld returned 1 exit status >... The actual failure is a test failure later in the build: ... ====================================================================== ERROR: Failure: ValueError (size is not compatible with inputs) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/loader.py", line 418, in loadTestsFromName addr.filename, addr.module) File "/usr/lib/python2.7/dist-packages/nose/importer.py", line 47, in importFromPath return self.importFromDir(dir_path, fqname) File "/usr/lib/python2.7/dist-packages/nose/importer.py", line 94, in importFromDir mod = load_module(part_fqname, fh, filename, desc) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/tests/test_special_methods.py", line 16, in <module> pm.Binomial('x3',100,.4), File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/distributions.py", line 270, in __init__ Stochastic.__init__(self, logp=logp, random=random, logp_partial_gradients = logp_partial_gradients, dtype=dtype, **arg_dict_out) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/PyMCObjects.py", line 705, in __init__ verbose=verbose) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/Node.py", line 201, in __init__ Node.__init__(self, doc, name, parents, cache_depth, verbose=verbose) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/Node.py", line 119, in __init__ self.parents = parents File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/Node.py", line 140, in _set_parents self.gen_lazy_function() File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/PyMCObjects.py", line 730, in gen_lazy_function self.value = self._random(**self._parents.value) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/distributions.py", line 110, in newfun return randfun(size=shape, *args, **kwargs) File "/<<BUILDDIR>>/pymc-2.2+ds/build/lib.linux-x86_64-2.7/pymc/distributions.py", line 724, in rbinomial return np.random.binomial(np.ravel(n),np.ravel(p),size) File "mtrand.pyx", line 3788, in mtrand.RandomState.binomial (numpy/random/mtrand/mtrand.c:32376) File "mtrand.pyx", line 388, in mtrand.discnp_array (numpy/random/mtrand/mtrand.c:9960) ValueError: size is not compatible with inputs ---------------------------------------------------------------------- Ran 111 tests in 4.814s FAILED (SKIP=7, errors=1) Plotting disabled debian/rules:41: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 1 cu Adrian -- "Is there not promise of rain?" Ling Tan asked suddenly out of the darkness. There had been need of rain for many days. "Only a promise," Lao Er said. Pearl S. Buck - Dragon Seed
