Hi, Andreas, على السبت 24 كانون الأول 2016 11:34، كتب Andreas Tille: > On Sat, Dec 24, 2016 at 07:24:22AM -0800, Afif Elghraoui wrote: >> I'm really sad to see the duplication of effort when I was so >> particular to make sure my work was pushed :(. Is there a way we can >> avoid this in the future? > > Its no real problem. I think it will not happen to frequently since the > situation to save package for upcoming releases is only every second > year - perhaps posting the fact you are working in a separate branch > would help in such cases.
Fair enough. I thought it might have been sufficient to post updates to the upstream tracker since the bug was marked as forwarded. > Feel free to replace everything I did by your > probably more advanced changes since you know the internals way better. > I also do not consider my time terribly wasted since I now have some > insight into these packages. > Thanks. As a quick update (also posted to the upstream tracker), some changes in blasr 5's handling of SAM/BAM files is causing the main problems now. Fixing it in pbhoney would require some more intrusive changes, which I could probably handle, but I don't think it would be a good idea to proceed without upstream's cooperation on this. It's possible that pbsuite will not be released with Stretch because of this. Thanks and regards Afif -- Afif Elghraoui | عفيف الغراوي http://afif.ghraoui.name