Your message dated Mon, 15 May 2017 09:04:17 +0000 with message-id <e1dabvn-0006bg...@fasolo.debian.org> and subject line Bug#861755: fixed in libpll 0.3.0-1 has caused the Debian Bug report #861755, regarding libpll: FTBFS on x86: AVX target specific option mismatch to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 861755: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=861755 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: libpll Version: 0.0+20160909+ds1-1 Severity: serious Tags: upstream Justification: fails to build from source (but built successfully in the past) Builds of libpll on x86 architectures (even kfreebsd-amd64) fail too: libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -msse3 -g -c core_partials_avx.c -fPIC -DPIC -o .libs/libpll_la-core_partials_avx.o core_partials_avx.c: In function 'pll_core_create_lookup_4x4_avx': core_partials_avx.c:155:11: warning: AVX vector return without AVX enabled changes the ABI [-Wpsabi] [...] /usr/lib/gcc/x86_64-kfreebsd-gnu/6/include/avxintrin.h:1270:1: error: inlining failed in call to always_inline '_mm256_set_epi64x': target specific option mismatch It appears to be performing CPU type detection at build time rather than runtime. As such, please specify --disable-avx everywhere and --disable-sse on i386 and ensure that the resulting configurations build. Thanks! FTR, I'm reporting this bug as a regression because I suspect it would affect binNMUs on amd64. -- Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
--- End Message ---
--- Begin Message ---Source: libpll Source-Version: 0.3.0-1 We believe that the bug you reported is fixed in the latest version of libpll, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 861...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated libpll package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Mon, 15 May 2017 09:19:35 +0200 Source: libpll Binary: libpll0 libpll-dev Architecture: source amd64 Version: 0.3.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: libpll-dev - Phylogenetic Likelihood Library (development) libpll0 - Phylogenetic Likelihood Library Closes: 861754 861755 Changes: libpll (0.3.0-1) unstable; urgency=medium . * Check for HAVE_X86INTRIN_H Closes: #861754 * New upstream version uses runtime detection and thus does not use AVX and SSE on i386 and other architectures Closes: #861755 Checksums-Sha1: 2af7a8be88effb710572039660a77d5d4969e7e5 1979 libpll_0.3.0-1.dsc 417a8093fae5297de1ff434bd6050ea14ca52d2b 2156064 libpll_0.3.0.orig.tar.gz 1a8e1d7e298ba1c7dd1c3d535dad2a3e3c163d00 13912 libpll_0.3.0-1.debian.tar.xz 6abe9a91b8c77d5a1f5ecbd018df3a35f43a4776 162860 libpll-dev_0.3.0-1_amd64.deb 4a76a7301fb83c24e32aa494baf0d9bdd193b75a 289804 libpll0-dbgsym_0.3.0-1_amd64.deb bd4f31e54681d1343a5502ee34bf3ef63d2c8304 150316 libpll0_0.3.0-1_amd64.deb 7b57caf489b2ce9ce729863b2fd10b5fc42de58a 5226 libpll_0.3.0-1_amd64.buildinfo Checksums-Sha256: e6fab6dbe9d657e4d1f1097b7219976eeaef3864664f1944781ca155577d887d 1979 libpll_0.3.0-1.dsc fdd52980d26fd8826871fd7d841d116c80c28f3aa5fb9430b50859aa4640e803 2156064 libpll_0.3.0.orig.tar.gz 9e9a9c28d7e3816e3689f40680528835f25ba4e660f947354a6e0cb0214708fd 13912 libpll_0.3.0-1.debian.tar.xz ee512d4cc7f11a7d3986e9fff634426b9fc37c0e6fe0a04f515174dd07b3581b 162860 libpll-dev_0.3.0-1_amd64.deb 87be737b43ebd8831883b9c485c3dbbc082760930ecce2331325ee393baa4e25 289804 libpll0-dbgsym_0.3.0-1_amd64.deb 01bff79af125d439ff98aa8fca1987c5c99f3cf6ade1bbe02496ce8b52329122 150316 libpll0_0.3.0-1_amd64.deb 2a505099153ecf9fae99d76525a93e1f6ce36a1b230bce5b87d7e21fb233a84d 5226 libpll_0.3.0-1_amd64.buildinfo Files: 14e3401e877e835a008f0e515904f8d0 1979 science optional libpll_0.3.0-1.dsc 10ff63355115e1971aa464eefafe115e 2156064 science optional libpll_0.3.0.orig.tar.gz 47d1699524b026dc3870991e92f08641 13912 science optional libpll_0.3.0-1.debian.tar.xz a628ea4c19200371d60988792987f719 162860 libdevel optional libpll-dev_0.3.0-1_amd64.deb 486f39655e03c6eb42acf07fa7c5044b 289804 debug extra libpll0-dbgsym_0.3.0-1_amd64.deb f504dea180808cc59b8cef02a597c984 150316 libs optional libpll0_0.3.0-1_amd64.deb 8e85686bdf6b86234f80130ea6629953 5226 science optional libpll_0.3.0-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJZGV3cAAoJEFeKBJTRxkbR74kP/2JWMM7RVxD9Es+Oi1YAjkxL LTwaqwYCtOzLt0YFvyphtn7yB+wHlDhhioLpkg89j7r892UAmYvhHejkvXBstDYc Jwyo/Kdh0QeDfVZ8mzcox/yjI8+Hhul+ZjrI7VwQc1gsHTRhOkUIHP1N+4p9qisL Wo6MO2vv4wlCJ4BzHNSdDdnDEOEGFImaCNvUg8iQpncqBaOokWb/iPwuWIhMA5rd R5IohOpdUyF6GLv/4FigAKAPCWVcVx/z/qSRjXFRlLw4yztaw8QoAZSK7BBZ7WaU HyYUbCm8/jD4XZxf74RbNaLvXX7l2z2E2qCMPNttqXY7elGTBKhre18euliVNiOA 4zJfARenAun++IXWjNu14gD8pKyLSNncYMffYpc8JhSZaUqThdN4NEqKb8du89cD FpA9LLUovM7C5RcIbLU22PN90w6rGYl4ffbKRogUnh8J1Yg9ronUjjoqZkv31iho PcOTtUOvfzKkD9kuJUXUpFFQVVcKKIyD02dbmmfxmJdWAubCikP6zT5yH/ZHwQ40 PdVMf/srGtch5S3q14+cHGTwRkPdt/bvkzQQoIREKD2iHhiekXi8txPh41icmTZn iTU4VSaE5VTdaG5UgULyLpQWoQkKY8r7jPJxb4Z3t2R/zZr+BZiuGvV+HgN7jLDR Cd91nLt2/LPla7eCX8Ej =8k5t -----END PGP SIGNATURE-----
--- End Message ---
