Your message dated Sat, 15 Jul 2017 22:17:10 +0000
with message-id <e1dwvn8-000fhj...@fasolo.debian.org>
and subject line Bug#865085: fixed in avogadro 1.2.0-1+deb9u1
has caused the Debian Bug report #865085,
regarding avogadro: doesn't display molecules
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
865085: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=865085
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: avogadro
Version: 1.2.0-1+b1
Severity: serious
Justification: package is useless
Dear Maintainer,
Avogadro in stretch appears to be unable to display any molecules. It only
displays the background colour fill. Picking any molecule should be enough
to reproduce this:
$ avogadro /usr/share/avogadro/fragments/alkanes/hexane.cml
or
$ avogadro
File → Import → Fetch by chemical name → hexane
The debug view shows that avogadro has imported the right number of atoms
and bonds, but nothing is displayed no matter what settings are chosen for
the viewer.
(checked across 3 computers including one on which avogadro had never been
installed before just in case it was a local config problem. Old discussions
on the avogadro development lists around such problems frequently implicate
compositing, but I this under Xvfb and various WMs and is, in any case, a
regression since jessie.)
cheers
Stuart
-- System Information:
Debian Release: 9.0
APT prefers proposed-updates
APT policy: (550, 'proposed-updates'), (500, 'stable-debug'), (500,
'stable'), (60, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.9.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8),
LANGUAGE=en_AU:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages avogadro depends on:
ii libavogadro1 1.2.0-1+b1
ii libc6 2.24-11
ii libgcc1 1:6.3.0-18
ii libopenbabel4v5 2.3.2+dfsg-3
ii libqt4-opengl 4:4.8.7+dfsg-11
ii libqtcore4 4:4.8.7+dfsg-11
ii libqtgui4 4:4.8.7+dfsg-11
ii libstdc++6 6.3.0-18
ii libx11-6 2:1.6.4-3
Versions of packages avogadro recommends:
ii avogadro-data 1.2.0-1
avogadro suggests no packages.
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: avogadro
Source-Version: 1.2.0-1+deb9u1
We believe that the bug you reported is fixed in the latest version of
avogadro, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 865...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <mba...@debian.org> (supplier of updated avogadro package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 13 Jul 2017 10:15:00 +0200
Source: avogadro
Binary: avogadro avogadro-data libavogadro1 libavogadro-dev python-avogadro
Architecture: source
Version: 1.2.0-1+deb9u1
Distribution: stretch
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Michael Banck <mba...@debian.org>
Description:
avogadro - Molecular Graphics and Modelling System
avogadro-data - Molecular Graphics and Modelling System (Data Files)
libavogadro-dev - Molecular Graphics and Modelling System (development files)
libavogadro1 - Molecular Graphics and Modelling System (library)
python-avogadro - Molecular Graphics and Modelling System (Python module)
Closes: 865085
Changes:
avogadro (1.2.0-1+deb9u1) stretch; urgency=medium
.
[ Anton Gladky ]
* Update eigen3 patches, pull them from upstream. (Closes: #865085)
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