Your message dated Thu, 28 Jun 2018 15:20:59 +0000 with message-id <e1fyyjd-00012e...@fasolo.debian.org> and subject line Bug#902348: fixed in pymol 2.1.0+dfsg-3 has caused the Debian Bug report #902348, regarding pymol: fails to start with runtime error regarding Qt to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 902348: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=902348 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: pymol Version: 2.1.0+dfsg-2 Severity: grave Justification: renders package unusable Dear Maintainer, pymol fails to start with the following error: Traceback (most recent call last): File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main "__main__", fname, loader, pkg_name) File "/usr/lib/python2.7/runpy.py", line 72, in _run_code exec code in run_globals File "/usr/lib/python2.7/dist-packages/pymol/__init__.py", line 65, in <module> pymol.launch(args) File "/usr/lib/python2.7/dist-packages/pymol/__init__.py", line 444, in launch from pmg_qt import pymol_qt_gui File "/usr/lib/python2.7/dist-packages/pmg_qt/pymol_qt_gui.py", line 17, in <module> from pymol.Qt import QtGui, QtCore, QtWidgets File "/usr/lib/python2.7/dist-packages/pymol/Qt/__init__.py", line 34, in <module> from PyQt4 import QtGui, QtCore, QtOpenGL RuntimeError: the PyQt4.QtCore and PyQt5.QtCore modules both wrap the QObject class I am not sure what is going on. Pymol checks for Qt versions 5 and 4 for python 2.7 in it's startup script on my system. I have both python-qt4 and python-pyqt5 installed on my system. Other packages seem to depend on one or the other. -- System Information: Debian Release: buster/sid APT prefers testing APT policy: (500, 'testing'), (500, 'stable') Architecture: amd64 (x86_64) Kernel: Linux 4.16.0-2-amd64 (SMP w/8 CPU cores) Locale: LANG=en_IN, LC_CTYPE=en_IN (charmap=UTF-8), LANGUAGE=en_IN:en (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled Versions of packages pymol depends on: ii freeglut3 2.8.1-3 ii libc6 2.27-3 ii libfreetype6 2.8.1-2 ii libgcc1 1:8.1.0-8 ii libgl1 1.0.0+git20180308-3 ii libglew2.0 2.0.0-6 ii libpng16-16 1.6.34-1 ii libstdc++6 8.1.0-8 ii libxml2 2.9.4+dfsg1-7 ii pymol-data 2.1.0+dfsg-2 ii python 2.7.15-3 ii python-numpy [python-numpy-abi9] 1:1.14.4-1 ii python-pmw 1.3.2-6 ii python-tk 2.7.15-1 Versions of packages pymol recommends: ii apbs 1.4-1+b1 pymol suggests no packages. -- no debconf information
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--- Begin Message ---Source: pymol Source-Version: 2.1.0+dfsg-3 We believe that the bug you reported is fixed in the latest version of pymol, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 902...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Stuart Prescott <stu...@debian.org> (supplier of updated pymol package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 29 Jun 2018 00:30:41 +1000 Source: pymol Binary: pymol pymol-data Architecture: source Version: 2.1.0+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org> Changed-By: Stuart Prescott <stu...@debian.org> Description: pymol - Molecular Graphics System pymol-data - data files for PyMOL Closes: 902348 Changes: pymol (2.1.0+dfsg-3) unstable; urgency=medium . * Team upload. * Force use of Tk GUI to prevent crashes with Qt GUI (Closes: #902348). Checksums-Sha1: b69776d291ace63c1d731b682daf770ab77dd6a7 2163 pymol_2.1.0+dfsg-3.dsc e5c88fe2fe9ce9f38a799595a090f1ee508805d1 56280 pymol_2.1.0+dfsg-3.debian.tar.xz 60e1e259fc40481e5f08787038570a896578d360 12903 pymol_2.1.0+dfsg-3_amd64.buildinfo Checksums-Sha256: c4ab4da8e9ec3608aff48b32351df9ffcebebc91e1f5382c3f6ae626d024affe 2163 pymol_2.1.0+dfsg-3.dsc da05b0b9198a224b349002f089d643c5b4d80b48787f7544ba95a8a34af59fb8 56280 pymol_2.1.0+dfsg-3.debian.tar.xz 8d264b6e7e205d198bc2bfa4b5049832bf6017dded26ba86c3aaea2ea0cba0ef 12903 pymol_2.1.0+dfsg-3_amd64.buildinfo Files: e4855dd8cd7443c4af2505c7f652205d 2163 science optional pymol_2.1.0+dfsg-3.dsc e072978824f958c9050f1c41bef667fc 56280 science optional pymol_2.1.0+dfsg-3.debian.tar.xz e3585db775c7c7654eccb2acdc72cf89 12903 science optional pymol_2.1.0+dfsg-3_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEkOLSwa0Uaht+u4kdu8F+uxOW8vcFAls09dMACgkQu8F+uxOW 8veFlQ//YXbArzPn/gyRVll7j39+hKYLYfQ2eOB1IER/WZzc+hFBy2Jtlx9eWtWd 8KEKYZY5oiwlX+xQuw8qJllTjBsrUmlAc0o7jN4FzTkWZqNWeiHw5jw31k0c0rt1 U5Y28M2J8ZRPpUD9eP+u3kgvrAwtFpYB+gv7ooBYA0RvEuYQkhDuGUjBPo2w84B2 Txn4YpsXnBePNWX1h5Bdju65VBbCVulUrqQv2osEtUlFa9yax4Wag9xbw/Ga6LZU 6D9dd9syfUnHNA1laIy+yVwrZPKN5mirffmq7uniES2DsV5N8x1bq5lhkYPB7z9O UWjZ6EViYm032bqjwaNpFrT1t83HqAqshxpbNcLgw2x+G6GuEiyDohCwhfMWL5J9 veslV23d5Z4s9FASJQVYIpXfH4v9VbD+LvBXweMDpEg//H4Sv33lxAYQXwqOJWCe xJXCSKo48G0wBUgnBrf+OHqTWC1ZuAKbaHZr7lAHFG5Y3cfi0yl0xLcbywKBmwzY m8GkrdkK3fdLc6OnptS2fiaseRgOihVFt2VIGFjODmCHmILR6Hsu2AhUrgx0l9ZC 9hrvqsgPUqpjlciisLjtmx2FN4Y5ofXV5Hubq2PnR8gBKMXmsTo4MHZwFSCmPn8v svPWwB1YBTrW47XLYrMxebz+3nTiupG5qAsXbNiy5CWzRToxQT4= =eXHD -----END PGP SIGNATURE-----
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