Your message dated Sat, 26 Jan 2019 07:34:23 +0000 with message-id <[email protected]> and subject line Bug#919728: fixed in beast2-mcmc 2.5.1+dfsg-2 has caused the Debian Bug report #919728, regarding beast2-mcmc: FTBFS (cannot find symbol jam.mac.Utils.macOSXRegistration) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 919728: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919728 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:beast2-mcmc Version: 2.5.1+dfsg-1 Severity: serious Tags: ftbfs Dear maintainer: I tried to build this package in buster but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-indep dh build-indep --with javahelper dh_update_autotools_config -i dh_autoreconf -i dh_auto_configure -i jh_linkjars -i debian/rules override_dh_auto_build make[1]: Entering directory '/<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg' # move tests requiring fest.swing out of the way mv src/test/beast/app/beauti debian/fest_swing_tests dh_auto_build ant -Duser.name debian Buildfile: /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/build.xml clean: init: [echo] BUILD_BEAST_2: /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/build.xml compile-all: [echo] Building BEAST 2 [mkdir] Created dir: /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/build [javac] Compiling 475 source files to /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/build [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/src/beast/app/beauti/Beauti.java:1274: error: cannot find symbol [javac] jam.mac.Utils.macOSXRegistration(application); [javac] ^ [javac] symbol: method macOSXRegistration(Application) [javac] location: class Utils [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 error [javac] 1 warning BUILD FAILED /<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg/build.xml:77: Compile failed; see the compiler error output for details. Total time: 38 seconds dh_auto_build: ant -Duser.name debian returned exit code 1 make[1]: *** [debian/rules:32: override_dh_auto_build] Error 2 make[1]: Leaving directory '/<<BUILDDIR>>/beast2-mcmc-2.5.1+dfsg' make: *** [debian/rules:23: build-indep] Error 2 dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2 -------------------------------------------------------------------------------- The build was made in my autobuilder with "dpkg-buildpackage -A" and it also fails here: https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/beast2-mcmc.html where you can get a full build log if you need it. If this is really a bug in one of the build-depends, please use reassign and affects, so that this is still visible in the BTS web page for this package. Thanks.
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--- Begin Message ---Source: beast2-mcmc Source-Version: 2.5.1+dfsg-2 We believe that the bug you reported is fixed in the latest version of beast2-mcmc, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated beast2-mcmc package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sat, 26 Jan 2019 08:10:27 +0100 Source: beast2-mcmc Architecture: source Version: 2.5.1+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Closes: 919728 Changes: beast2-mcmc (2.5.1+dfsg-2) unstable; urgency=medium . * Avoid Mac only code which is not needed and fails due missing support in latest libjam-java Closes: #919728 * debhelper 12 * Standards-Version: 4.3.0 Checksums-Sha1: 0a26c6ac8136a542f386c0372fc6232aa38851e9 2349 beast2-mcmc_2.5.1+dfsg-2.dsc e99de8dc43fe35eb1975d21284765ef3af04fe3e 10720 beast2-mcmc_2.5.1+dfsg-2.debian.tar.xz 7ab485ec33d4896af84aa6d14d528e17e5f9cb56 15210 beast2-mcmc_2.5.1+dfsg-2_amd64.buildinfo Checksums-Sha256: 41ea135a37d1f0be6bef709a556f5eb1a70661ef4855e952acb9d4bde8e916c9 2349 beast2-mcmc_2.5.1+dfsg-2.dsc 72b370786071cbdb2df5edc022d89b49d412786d7b977048e39599e78a1544ed 10720 beast2-mcmc_2.5.1+dfsg-2.debian.tar.xz caf7915d590a78ff98a8bcd59121baddee0bc560d822f2920114c9cd4bd31768 15210 beast2-mcmc_2.5.1+dfsg-2_amd64.buildinfo Files: da71d0f04eb31e2ac08eda6b67e3cc51 2349 science optional beast2-mcmc_2.5.1+dfsg-2.dsc 4be1b41b8026549e852f0333459d6dd3 10720 science optional beast2-mcmc_2.5.1+dfsg-2.debian.tar.xz 0e8b97928c9cf692cfb1fdcb52968835 15210 science optional beast2-mcmc_2.5.1+dfsg-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlxMCYQRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtELnA/8DJqZP/GP8P78vTmORfs4nt8CzybP34EU JdaQJaCvx/BWEO8snwbpleGMECxtKzkF9X7LT2+VeSpIdXIoB5phEyR23+VMrmxV puFDQCPHm4xTyJy3AtKznmSUGCUUaXI8LNJHtdLIM6KTDNfLlw/bKQcn2I97Y+o0 caFDT5sRyC0Uxgl0mSW0knxDOn4skZsS5Vdf7k6nJHnMABKnOfAfnNFNgmTWORVL l6E0nv7hjl9B4a5KXMKSO+bGuFkDuJzNIHWTreiJ9YDJPOSiDIsXSGutuOmXFL/7 QqQYgZfRetoj9KcGxnmIZdLN2idUN90DiYpQCuZeuEPeYGElwqR8ilJNQ5Hl9QlX SbMdFFa5MJ3G5D0O9ikGdH5QWPYkC2qfMhjF65vlbY7tTSefOQyY1pA80fz+u6ci yFMMOmBq4myvVXMx/7FdJzRqHibYmtwTs3+zqjobICGZRyZp7Wt8yz21V2/Mb0IM Pl4TArljFp1FvmJN1/rdh0+w4A9Z8ZpeDmd6dB23HObTEAuHJrpu0oH3zaFJg+lo oanG2FQIL2IKCD1ZNy43SiKlzAov/Io+WAAuGdFmrLkbdB+/U4lMejSZI5HtsJkA Yt/IXoSJSobP0S/cHS7d2anpRI0I+gt/TNJt+eL+DmYHjOioqVY2psFQBvuoTjEL AbJDmf9pyhE= =bkmi -----END PGP SIGNATURE-----
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