Your message dated Thu, 07 Feb 2019 12:19:12 +0000
with message-id <[email protected]>
and subject line Bug#890116: fixed in bedtools 2.27.1+dfsg-3
has caused the Debian Bug report #890116,
regarding bedtools FTBFS on 32bit: Tools failing: coverage intersect
negativecontrol reldist shuffle split
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
890116: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890116
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: bedtools
Version: 2.27.1+dfsg-1
Severity: serious
https://buildd.debian.org/status/package.php?p=bedtools&suite=sid
...
--------------------------
Test Results
--------------------------
Tools passing: bamtobed bamtofastq bed12tobed6 closest cluster complement
expand fisher flank general genomecov getfasta groupby jaccard makewindows map
merge multicov sample shift slop sort spacing subtract
Tools failing: coverage intersect negativecontrol reldist shuffle split
NB: the 'negativecontrol' test is supposed to fail. If it wasn't caught,
something went wrong with this test script.
Makefile:196: recipe for target 'test' failed
make[1]: *** [test] Error 1
--- End Message ---
--- Begin Message ---
Source: bedtools
Source-Version: 2.27.1+dfsg-3
We believe that the bug you reported is fixed in the latest version of
bedtools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated bedtools
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Mon, 04 Feb 2019 05:33:48 -0800
Source: bedtools
Binary: bedtools bedtools-test
Architecture: source
Version: 2.27.1+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Description:
bedtools - suite of utilities for comparing genomic features
bedtools-test - test data for the bedtools package
Closes: 890116
Changes:
bedtools (2.27.1+dfsg-3) unstable; urgency=medium
.
* Team upload.
* Print compilation commands
* For *i386: use -ffloat-store; disable shuffle tests. Closes: #890116
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
* Remove trailing whitespace in debian/changelog
* Remove trailing whitespace in debian/copyright
* mark bedtools-test as Multi-Arch: foreign
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