Your message dated Thu, 14 Feb 2019 13:49:21 +0000
with message-id <[email protected]>
and subject line Bug#890117: fixed in bedtools 2.27.1+dfsg-4
has caused the Debian Bug report #890117,
regarding bedtools FTBFS on big endian: Tools failing: bamtobed bamtofastq
coverage genomecov groupby intersect jaccard map merge multicov negativecontrol
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
890117: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890117
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: bedtools
Version: 2.27.1+dfsg-1
Severity: serious
https://buildd.debian.org/status/package.php?p=bedtools&suite=sid
...
--------------------------
Test Results
--------------------------
Tools passing: bed12tobed6 closest cluster complement expand fisher flank
general getfasta makewindows reldist sample shift shuffle slop sort spacing
split subtract
Tools failing: bamtobed bamtofastq coverage genomecov groupby intersect
jaccard map merge multicov negativecontrol
NB: the 'negativecontrol' test is supposed to fail. If it wasn't caught,
something went wrong with this test script.
Makefile:196: recipe for target 'test' failed
make[1]: *** [test] Error 1
--- End Message ---
--- Begin Message ---
Source: bedtools
Source-Version: 2.27.1+dfsg-4
We believe that the bug you reported is fixed in the latest version of
bedtools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Charles Plessy <[email protected]> (supplier of updated bedtools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 14 Feb 2019 22:11:21 +0900
Source: bedtools
Binary: bedtools bedtools-test
Architecture: source
Version: 2.27.1+dfsg-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Charles Plessy <[email protected]>
Description:
bedtools - suite of utilities for comparing genomic features
bedtools-test - test data for the bedtools package
Closes: 890117
Changes:
bedtools (2.27.1+dfsg-4) unstable; urgency=medium
.
* Disable the shuffle test on other 32-bit architectures.
* Restrict build to little-endian release architectures. Closes: #890117
* QA-build with Salsa.
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