Your message dated Wed, 19 Jun 2019 11:18:31 +0000 with message-id <e1hdybn-0009ww...@fasolo.debian.org> and subject line Bug#930368: fixed in gatb-core 1.4.1+git20181225.44d5a44+dfsg-3 has caused the Debian Bug report #930368, regarding gatb-core: FTBFS due to inaccurate symbols file to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 930368: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=930368 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: gatb-core Version: 1.4.1+git20181225.44d5a44+dfsg-2 Severity: serious Justification: FTBFS -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Hi, During a rebuild of gatb-core for unstable on amd64 I experienced a FTBFS at the dh_makeshlibs step: dh_makeshlibs -O--sourcedirectory=gatb-core dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libgatbcore2/DEBIAN/symbols doesn't match completely debian/libgatbcore2.symbols.amd64 - --- debian/libgatbcore2.symbols.amd64 (libgatbcore2_1.4.1+git20181225.44d5a44+dfsg-2_amd64) +++ dpkg-gensymbolsErQvax 2019-06-11 09:56:28.965481025 +0000 @@ -8997,7 +8997,7 @@ _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi1EEEjjjEESaIS7_EE12emplace_backIJS7_EEEvDpOT_@Base 1.4.1+git20181225.44d5a44+dfsg _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi1EEEjjjEESaIS7_EE17_M_realloc_insertIJS7_EEEvN9__gnu_cxx17__normal_iteratorIPS7_S9_EEDpOT_@Base 1.4.1 _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi1EEEjjjEESaIS7_EE7reserveEm@Base 1.4.1 - - _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi2EEEjjjEESaIS7_EE12emplace_backIJS7_EEEvDpOT_@Base 1.4.1+git20181225.44d5a44+dfsg +#MISSING: 1.4.1+git20181225.44d5a44+dfsg-2# _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi2EEEjjjEESaIS7_EE12emplace_backIJS7_EEEvDpOT_@Base 1.4.1+git20181225.44d5a44+dfsg _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi2EEEjjjEESaIS7_EE17_M_realloc_insertIJS7_EEEvN9__gnu_cxx17__normal_iteratorIPS7_S9_EEDpOT_@Base 1.4.1 _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi2EEEjjjEESaIS7_EE7reserveEm@Base 1.4.1 _ZNSt6vectorISt5tupleIJjN4gatb4core5tools4math8LargeIntILi3EEEjjjEESaIS7_EE17_M_realloc_insertIJS7_EEEvN9__gnu_cxx17__normal_iteratorIPS7_S9_EEDpOT_@Base 1.4.1 @@ -9007,7 +9007,7 @@ _ZNSt6vectorISt5tupleIJmiEESaIS1_EE17_M_realloc_insertIJS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_@Base 1.4.1 _ZNSt6vectorISt5tupleIJmiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEEESaIS7_EE17_M_realloc_insertIJS7_EEEvN9__gnu_cxx17__normal_iteratorIPS7_S9_EEDpOT_@Base 1.4.1 _ZNSt6vectorISt6threadSaIS0_EE17_M_realloc_insertIJZN10ThreadPoolC4EmEUlvE_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_@Base 1.4.1 - - _ZNSt6vectorIbSaIbEE13_M_initializeEm@Base 1.4.1+git20181225.44d5a44+dfsg +#MISSING: 1.4.1+git20181225.44d5a44+dfsg-2# _ZNSt6vectorIbSaIbEE13_M_initializeEm@Base 1.4.1+git20181225.44d5a44+dfsg _ZNSt6vectorIbSaIbEE13_M_insert_auxESt13_Bit_iteratorb@Base 1.4.1 _ZNSt6vectorIbSaIbEE13_M_reallocateEm@Base 1.4.1 _ZNSt6vectorIbSaIbEE14_M_fill_insertESt13_Bit_iteratormb@Base 1.4.1 dh_makeshlibs: failing due to earlier errors make: *** [debian/rules:10: binary] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary subprocess returned exit status 2 Thanks, _g. - -- System Information: Debian Release: buster/sid Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores) Kernel taint flags: TAINT_WARN Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE=fr_FR.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEEoJObzArDE05WtIyR7+hsbH/+z4MFAlz/ttsACgkQ7+hsbH/+ z4P/bgf/aI8Kn2N0XrowNHz05+Hw9zTryiLdxmSgqs3HYJwq+bUjzbpZQTbwFb+U Fgosu7yUAzPQSc0XeWAHbE9zosOVH5pqsvIVCvOOcwIrMJ1w28arh0YtsVTNIs71 4Cn1/x22ZZNHe6rbbb1Kzf0gf1JBMm6riKVqXDh1iJf0S4a1O63w1O6gNXGvXPsj cwfqbP6En5Wmqys51FH3ZTAWK/ZF/3LPAyGlxgrK7KiFpub1ckph0WiKlaRFOYAv uzG8Wy7MeVBaG9fpUd/oF+qQiUM+OrHWCXZLLuWKj7UCdCfRgzu3D+t7R5NlTFVr Rh/mAr/U0rbFG7nDa8g0wOCQNrGBIw== =2Gnd -----END PGP SIGNATURE-----
--- End Message ---
--- Begin Message ---Source: gatb-core Source-Version: 1.4.1+git20181225.44d5a44+dfsg-3 We believe that the bug you reported is fixed in the latest version of gatb-core, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 930...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated gatb-core package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 19 Jun 2019 12:25:30 +0200 Source: gatb-core Binary: gatb-core libgatbcore2 libgatbcore-dev gatb-core-testdata Architecture: source Version: 1.4.1+git20181225.44d5a44+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: gatb-core - Genome Analysis Toolbox with de-Bruijn graph gatb-core-testdata - Genome Analysis Toolbox with de-Bruijn graph (test data) libgatbcore-dev - development library of the Genome Analysis Toolbox libgatbcore2 - dynamic library of the Genome Analysis Toolbox Closes: 930368 Changes: gatb-core (1.4.1+git20181225.44d5a44+dfsg-3) unstable; urgency=medium . * Fix symbols Closes: #930368 Checksums-Sha1: aa1878599e09574e4179ee238f0d667a25f200be 2452 gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc 1fb578281792fae54f82b14f2de9d1014e06ba39 92808 gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.debian.tar.xz Checksums-Sha256: 43b81c41d8056711496b7d860f7cff3f2fcfe0e085c776c43089a525571b46d1 2452 gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc ac15f3e8e3dde21e67863aa70f73f28655b6ea7f246adf7500c52a9c5d5b2a51 92808 gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.debian.tar.xz Files: 643ebf0d0a4db9fdfb500daaa6b65940 2452 science optional gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.dsc 8623b91dda142310af6899886a0bec20 92808 science optional gatb-core_1.4.1+git20181225.44d5a44+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl0KFVsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHqlQ/9GAVw13UsmQDVluF10RB1W+fSJclzYYQs l8SKE82QwSHNtqSouPHfid5RKWGsPcrX3BmqEvRNRZzTqiHvMEdvcYe691fYkD3a nCV5dcz/0P82iGP7oP5bCF3M4+bP7E3p4/ohEWGV9OquPnWW+wk6pYhAREN9cj2R YWJkKb6uEWWhkhXOtmt4oc/BdDVvqUSP+/IcNb5uzT6r2xh6jPTc1isWEFomZ2Wb jvoX25vyKFxQ9kIYBiV6cu0avZlQ4tlbZZFbD2stvwrFQYbCj5EW+uXgyTK1fBzP l6NUsxrvePr31Yt4DYdyaMbAMDcMTYTJGy6/s/T4FR8eNq9HwGRGszEwIM4FSaC2 iC7k0UwhmIUMjVwGp7ndDoPhPl3w1MufMbcRB48/3Qy/1A0wyL1zFbHlaGtssC2m 2SWEMax1Y3aMVlGj106W/UNsj0e7Kj1UpwtdmtnbxrwHAtirxsgzFv6r0fRss1tv /ehtCBCkv4SJTjllR1u+0Uf/w08nIvFg9oee2O4Rzi4PNhO2m+O7a8rnmUsYeQbA nFmBZsgyKNPu9bnPnnnj38p5Asai9J3TD3z0Hx+BwNY3douihWEGWMllkfaPmlN9 +TAB4SXZchbYlQXay3filqg2KlqHJ6b40bthH9OlujsDR8eys+gsEjByl0hHbdE3 WkIKJiRPM2Y= =Atet -----END PGP SIGNATURE-----
--- End Message ---
