Your message dated Wed, 26 Feb 2020 11:51:22 +0000
with message-id <[email protected]>
and subject line Bug#952573: fixed in spectral-cube 0.4.5-2
has caused the Debian Bug report #952573,
regarding spectral-cube: autopkgtest failure (blocks astropy migration)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
952573: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=952573
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: spectral-cube
Version: 0.4.5-1
Severity: serious
Astropy was recently updated to support the new version of wcslib.
Unfortunately this fix is being blocked from migrating to testing by an
autopkgtest failure in spectral-cube, this is happening in both in migration
tests and in plain unstable tests.
migration test:
https://ci.debian.net/data/autopkgtest/testing/amd64/s/spectral-cube/4375843/log.gz
plain unstable test:
https://ci.debian.net/data/autopkgtest/unstable/amd64/s/spectral-cube/4382183/log.gz
=================================== FAILURES ===================================
____________________________ test_stacking_badvels _____________________________
def test_stacking_badvels():
'''
Regression test for #493: don't include bad velocities when stacking
'''
amp = 1.
v0 = 0. * u.km / u.s
sigma = 8.
noise = None
shape = (100, 25, 25)
test_cube, test_vels = \
generate_gaussian_cube(amp=amp, sigma=sigma, noise=noise,
shape=shape)
true_spectrum = gaussian(test_cube.spectral_axis.value,
amp, v0.value, sigma)
test_vels[12,11] = 500*u.km/u.s
with warnings.catch_warnings(record=True) as wrn:
# Stack the spectra in the cube
stacked = \
stack_spectra(test_cube, test_vels, v0=v0,
stack_function=np.nanmean,
xy_posns=None, num_cores=1,
chunk_size=-1,
progressbar=False, pad_edges=False)
> assert 'Some velocities are outside the allowed range and will be'
in str(wrn[-1].message)
E assert 'Some velocities are outside the allowed range and will be' in
"'datfix' made the change 'Set DATE-REF to '1858-11-17' from MJD-REF'."
E + where "'datfix' made the change 'Set DATE-REF to '1858-11-17' from
MJD-REF'." = str(FITSFixedWarning("'datfix' made the change 'Set DATE-REF to '1858-11-17'
from MJD-REF'."))
E + where FITSFixedWarning("'datfix' made the change 'Set DATE-REF to
'1858-11-17' from MJD-REF'.") = <warnings.WarningMessage object at
0x7f3989229c50>.message
This seems similar to a testsuite failure that happened in astropy when the inital attempt was
made to rebuild it for 7.1 (
https://buildd.debian.org/status/fetch.php?pkg=astropy&arch=amd64&ver=4.0-3%2Bb1&stamp=1582194992&raw=0
) , said testsuite failure was apparently fixed by
https://salsa.debian.org/debian-astro-team/astropy/-/commit/a7a71b323d66984dfc482ea95779e26018fc2cec
. Perhaps a similar fix is needed in the spectral-cube tests?
--- End Message ---
--- Begin Message ---
Source: spectral-cube
Source-Version: 0.4.5-2
Done: Ole Streicher <[email protected]>
We believe that the bug you reported is fixed in the latest version of
spectral-cube, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Ole Streicher <[email protected]> (supplier of updated spectral-cube package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 26 Feb 2020 12:12:04 +0100
Source: spectral-cube
Architecture: source
Version: 0.4.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Astronomy Team
<[email protected]>
Changed-By: Ole Streicher <[email protected]>
Closes: 952573
Changes:
spectral-cube (0.4.5-2) unstable; urgency=medium
.
* Search required warning message in all warnings for test (Closes: #952573)
* Push Standards-Version to 4.5.0. No changes needed.
Checksums-Sha1:
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af70404f1a464cc284738058d884f759081efa94 5488
spectral-cube_0.4.5-2.debian.tar.xz
Checksums-Sha256:
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spectral-cube_0.4.5-2.dsc
7e0675a48966c1c0b7913355b0f085adf9a5263ba9a5da152e177b43fa22345c 5488
spectral-cube_0.4.5-2.debian.tar.xz
Files:
0ce05695e499e847f3591cfd426148d9 2184 python optional spectral-cube_0.4.5-2.dsc
ce3dd056c83910dceeefbf9bcc605f99 5488 python optional
spectral-cube_0.4.5-2.debian.tar.xz
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