Your message dated Sat, 08 Aug 2020 22:18:30 +0000 with message-id <e1k4xac-0003zj...@fasolo.debian.org> and subject line Bug#966470: fixed in biobambam2 2.0.173+ds-1 has caused the Debian Bug report #966470, regarding biobambam2: autopkgtest failures: Segmentation fault bamsormadup < SRR11728627.bam > SRR11728627.sorted.bam to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 966470: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=966470 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: biobambam2 Version: 2.0.164+ds-1 Severity: serious Hi, biobambam2 fails its autopkg tests: https://ci.debian.net/packages/b/biobambam2/testing/amd64/ autopkgtest [17:40:54]: test run-unit-test: [----------------------- [93m[1mTest 1[0m /tmp/autopkgtest-lxc.hkbkydv5/downtmp/build.3IE/src/debian/tests/run-unit-test: line 20: 794 Segmentation fault bamsormadup < SRR11728627.bam > SRR11728627.sorted.bam autopkgtest [17:40:55]: test run-unit-test: -----------------------] autopkgtest [17:40:55]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - run-unit-test FAIL non-zero exit status 139 Andreas
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--- Begin Message ---Source: biobambam2 Source-Version: 2.0.173+ds-1 Done: =?utf-8?q?=C3=89tienne_Mollier?= <etienne.moll...@mailoo.org> We believe that the bug you reported is fixed in the latest version of biobambam2, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 966...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Étienne Mollier <etienne.moll...@mailoo.org> (supplier of updated biobambam2 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sat, 08 Aug 2020 18:51:02 +0200 Source: biobambam2 Architecture: source Version: 2.0.173+ds-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Étienne Mollier <etienne.moll...@mailoo.org> Closes: 966470 966472 Changes: biobambam2 (2.0.173+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * d/control: added zlib1g-dev to dependencies of biobambam2. Closes: #966470, #966472 * d/upstream/metadata: filled Repository and Repository-Browse per lintian informational message upstream-metadata-missing-repository. Checksums-Sha1: 25e173439e690e275e92e94db5b9f990773d9baf 2075 biobambam2_2.0.173+ds-1.dsc c91d092a4789aff875c73d2d59a6207c3237077e 244700 biobambam2_2.0.173+ds.orig.tar.xz fac39885912b9c090f07d46503cc2cd3e1fb648a 1031832 biobambam2_2.0.173+ds-1.debian.tar.xz de24430a5cd98872e7db4b9e41d241f1e02126d7 5764 biobambam2_2.0.173+ds-1_amd64.buildinfo Checksums-Sha256: c4cceb89d49017f636b03c7b2bf1518aa68d36c2858a6896f4feb096e8bd0f59 2075 biobambam2_2.0.173+ds-1.dsc 596eb71f4384177033949107f85c0c69ffc659347583d3b1611b15aea49d5a96 244700 biobambam2_2.0.173+ds.orig.tar.xz 7a2718088eab790f6b206bffb56cd97af52e82cb100e1ef4715930026f649599 1031832 biobambam2_2.0.173+ds-1.debian.tar.xz c6f5d1e49e1a226c3b8b2c9d49f073319e6358d1b2e1660561eec2912b14abc1 5764 biobambam2_2.0.173+ds-1_amd64.buildinfo Files: 5a9f2120d4ccc5e249bf1372ab3b5bf6 2075 science optional biobambam2_2.0.173+ds-1.dsc 7f9f274cf2329eb8eb2efcd1a4054fc2 244700 science optional biobambam2_2.0.173+ds.orig.tar.xz 3ef7bb2f2a8e6b6f2a45b9b1f2296e5d 1031832 science optional biobambam2_2.0.173+ds-1.debian.tar.xz 8fe4a4f9c51ea46743043943682df25c 5764 science optional biobambam2_2.0.173+ds-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl8vIRgRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEVpQ//SBY6SfmwSsIMFNIF9NvBOIcA+fbmBqta T+rajNuut1+TqZ1OMjGFXl//+DnW04tW73J6nzF2NU0HUNYNRyUMjoTrx295+4sT XqEGLVNlNCB4FyPzEKzOVidxjMO4Lnzqu+F27YzD44d1pBJrszmTaVUg9B7WuILY nyceYPhXgJGqe8Mdohr3vrRyyvRPbSmTZW3PB/DMT8xaASldfopUpSWK6BuKRni0 yjWGsOOqVjigWXJAcrbDnif+pF0h31f91tOduHQeXkS+R7KVwj2j4wD9yr540gRM 5sZP0a39EFl6ib7vBS6lV5fyaHMLQ+rdlJ4udk68Y55bMWeX9tNq+VgcJBqVK7DP aporo4oBRHhhIaIyniA/+kAy8Ch2qZGE23G6oOjDLKQLmmNqVu42TYu/UPmUFEK2 RtlUhwy7bYjfohYTIztFHzG9zv60BJfY8rtbB49kefDoud2vi/TrEjEE7GMWeLi4 QeSwHGHhzItL2Oq9FXgB/TdmOG2CdBgiYr0iUvCB/CvxZx68ufl2U8bTsmna+e2+ SqWu7B6HNcnqTJoQCJ8ovIxOJMUUQEanvv+OrU032ZVPV+M/Kk5H52VSCYenXo4b OSBnw5/xaM0hOnh9YBKYK0xR7WiLOc/Dw6729Q2xxRbCnx0AG+A55MA6YhnAsB74 LKK9bbUOoUI= =fEJu -----END PGP SIGNATURE-----
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