Your message dated Thu, 13 Aug 2020 20:34:32 +0000 with message-id <[email protected]> and subject line Bug#903213: fixed in datalad 0.13.2-1 has caused the Debian Bug report #903213, regarding datalad: FTBFS in stretch/buster/sid to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 903213: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=903213 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:datalad Version: 0.4.1-1 Severity: serious Tags: ftbfs Dear maintainer: I tried to build this package in stretch + security + stretch-proposed-updates but it failed: -------------------------------------------------------------------------------- [...] debian/rules build-indep dh build-indep --with python2 --buildsystem=pybuild dh_testdir -i -O--buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 2.7 I: pybuild base:184: python2.7 setup.py config running config dh_auto_build -i -O--buildsystem=pybuild pybuild --build --test-nose -i python{version} -p 2.7 I: pybuild base:184: /usr/bin/python setup.py build running build running build_py creating /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad [... snipped ...] File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/support/tests/test_annexrepo.py", line 247, in test_AnnexRepo_is_under_annex assert_equal(ar.is_under_annex(testfiles, batch=batch), target_value) AssertionError: Lists differ: [False, False, False] != [True, False, False] First differing element 0: False True - [False, False, False] + [True, False, False] ====================================================================== FAIL: datalad.support.tests.test_gitrepo.test_GitRepo_get_toppath ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/tests/utils.py", line 706, in newfunc t(*(arg + (uri,)), **kw) File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/tests/utils.py", line 536, in newfunc return t(*(arg + (filename,)), **kw) File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/support/tests/test_gitrepo.py", line 637, in test_GitRepo_get_toppath eq_(GitRepo.get_toppath(repo, follow_up=False), reporeal) AssertionError: '/tmp/datalad_temp_testrepo_bh4Q3X' != '/tmp/datalad_temp_testrepo_bh4Q3X/sub dataset1/subm 1' ====================================================================== FAIL: datalad.support.tests.test_gitrepo.test_submodule_deinit ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest self.test(*self.arg) File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/tests/utils.py", line 706, in newfunc t(*(arg + (uri,)), **kw) File "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build/datalad/support/tests/test_gitrepo.py", line 840, in test_submodule_deinit eq_(['subm 1', 'subm 2'], [s.name for s in top_repo.get_submodules()]) AssertionError: ['subm 1', 'subm 2'] != [] ---------------------------------------------------------------------- Ran 616 tests in 167.088s FAILED (SKIP=65, errors=63, failures=15) E: pybuild pybuild:283: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_2.7/build; python2.7 -m nose -s -v datalad dh_auto_test: pybuild --test --test-nose -i python{version} -p 2.7 --test-nose returned exit code 13 debian/rules:27: recipe for target 'override_dh_auto_test' failed make[1]: *** [override_dh_auto_test] Error 25 make[1]: Leaving directory '/<<PKGBUILDDIR>>' debian/rules:19: recipe for target 'build-indep' failed make: *** [build-indep] Error 2 dpkg-buildpackage: error: debian/rules build-indep gave error exit status 2 -------------------------------------------------------------------------------- This is just how the build ends in my autobuilder with dpkg-buildpackage -A, but there are full build logs available here: https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/datalad.html A diff between the previous successful build log and this (failed) one yields this result: -Get:63 http://deb.debian.org/debian-security stretch/updates/main amd64 git-annex amd64 6.20170101-1+deb9u1 [10.9 MB] +Get:63 http://deb.debian.org/debian stretch-proposed-updates/main amd64 git-annex amd64 6.20170101-1+deb9u2 [10.9 MB] so it seems git-annex now behaves in a way which breaks the tests. (X-Debian-CC to Sean Whitton, who did the proposed-updates upload, in case he has any hint about the reason for this FTBFS in datalad). Thanks.
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--- Begin Message ---Source: datalad Source-Version: 0.13.2-1 Done: Yaroslav Halchenko <[email protected]> We believe that the bug you reported is fixed in the latest version of datalad, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Yaroslav Halchenko <[email protected]> (supplier of updated datalad package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 13 Aug 2020 09:37:20 -0400 Source: datalad Binary: datalad python3-datalad Architecture: source all Version: 0.13.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team <[email protected]> Changed-By: Yaroslav Halchenko <[email protected]> Description: datalad - data files management and distribution platform python3-datalad - data files management and distribution platform Closes: 903213 963856 966948 Changes: datalad (0.13.2-1) unstable; urgency=medium . * New upstream release - since 0.12.x series, many tests instability issues were addressed. (Closes: #903213, #966948) * debian/rules - remove WRAPT_DISABLE_EXTENSIONS=1 workaround -- wrapt should no longer cause segfaults * debian/patches + 0001-BF-serve_path_via_http-HTTPPath-use-localhost-not-ha.patch a semi-blind patch to avoid hardcoding 127.0.0.1 and use localhost instead so to make it potentially work on IPv6 only setups. Please reopen if that does not fix it (Closes: #963856) Checksums-Sha1: 6810ea413fd2a34dd1bb7b10ef4d7123411f5f41 2744 datalad_0.13.2-1.dsc ca97dc5c3e5486b7750fb2b77a56a63817f4ea52 1573514 datalad_0.13.2.orig.tar.gz 02d47a8b40e5a1dd7ff8241b9c582c2874676199 14240 datalad_0.13.2-1.debian.tar.xz a14294bf7be37806d149dbd47bf6735975467faf 133504 datalad_0.13.2-1_all.deb 34811184020f479b1ace0cd0c8d69c5d78143c5e 10226 datalad_0.13.2-1_amd64.buildinfo ddc9acf5a7d0a0601c065e49359e7219ddeac176 1098296 python3-datalad_0.13.2-1_all.deb Checksums-Sha256: c685bc62e11c044136a23483d847e83111219d1624b3ed69c230768c338a88aa 2744 datalad_0.13.2-1.dsc 7be72d7a119d9062edcab01e892b244d99dbeb11598294ed1512db9167a83852 1573514 datalad_0.13.2.orig.tar.gz dacc6f5f01f0a9c34951fa2226a7cf3d7ebb0c3637a1e65cecb5586b43796146 14240 datalad_0.13.2-1.debian.tar.xz 25432b4e975c5e5d9d34cbe433b2cef7fcfd038b8d34314bb4d9c072bfcc40e8 133504 datalad_0.13.2-1_all.deb 69dc63c73dd4d9f59e113487ea8fd2353315e95bd6f8fb0c7f21b82d6b56803e 10226 datalad_0.13.2-1_amd64.buildinfo b9651b94f756ed61e42df1befb7397456bf0ea924e53c586b2cf95d04e16648f 1098296 python3-datalad_0.13.2-1_all.deb Files: 36c036ffdac8c7b239673607bb50d531 2744 science optional datalad_0.13.2-1.dsc e256c91d008a2b8ad812fd1fdeb7bc5d 1573514 science optional datalad_0.13.2.orig.tar.gz 22f3612eb30e52f5bb513e6cf872b67e 14240 science optional datalad_0.13.2-1.debian.tar.xz 362f36f16e0b0ecb8a9f0cd91a98e5b1 133504 science optional datalad_0.13.2-1_all.deb ee6e606a0a7e9af86b4ffb152465345a 10226 science optional datalad_0.13.2-1_amd64.buildinfo 30fa9e606ef93aa02c35cc6e53b873d2 1098296 python optional python3-datalad_0.13.2-1_all.deb -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEExbkF8OjZ/ZZo/zZvot4jUGLaM/oFAl81nW4ACgkQot4jUGLa M/ob/xAAjZfw0ORY/wLX+uFWbb/jYGTgr9Ua8OO78uEwSOJh/fYfciCEfZV0+5Ri VdVX9p6d9UCwxVBkNhOp196++zNOa4vVR6xyEgI7bAa5x2VuFoeYzypIcsecXaiO aAwxWeW57YfHifYGD7jyvUHwpvhZOJuaK9mkRhSUerqubHRT0VCvd8YNsX9NRA6P Uno2hy+S9bStT7VdKaiDo/MIdcEoG195ZHaVzQ5RcHFjV6vv5oepdU8fRHQy8CXQ Sw2PSTcZpUsIQVBRaL0wd/kmlrrFQA+xqTOpXr0TrKFLags8V5HEHDLPEMLcZA32 J3Xkv9gKTca0SKY/xk4PNXbQzf2BjhXLBJO9N3Vh5GIOrDx+Jv6QKmOn39ekjIDb mN5m40svRMAwFsbH7xuiC+p99J4xCqr3Ou4Zcq9fANsTXwH7ZqMca5mvPgfADGRS GQrvRdtXH/Dvtdd8xY3jz7dmjKOlI/psAJ8DX+YH4h+O6U4vuM8b0W1nvj694keU gNFlD4oC+jYBao1btJHDQceIoYPskWv45MztjWlzMYw3xPjoMDbjqjkaYZbUDG45 gJVE3EwbetGcFeb1OW/WLs4oxdTpmyyqEfIEa0XhYG7PT7GBTtv39678rNsRixZV ygInHal2uBm0u0J9UVxTfX0gPSN5uWlPtw56aLxXFGLcXPb/Z/U= =frOQ -----END PGP SIGNATURE-----
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