Your message dated Sat, 05 Dec 2020 14:53:00 +0000
with message-id <[email protected]>
and subject line Bug#974088: fixed in imbalanced-learn 0.7.0-6
has caused the Debian Bug report #974088,
regarding imbalanced-learn: autopkgtest regression
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
974088: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=974088
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: imbalanced-learn
Version: 0.7.0-5
X-Debbugs-CC: [email protected]
Severity: serious
User: [email protected]
Usertags: regression
Dear maintainer(s),
With a recent upload of imbalanced-learn the autopkgtest of
imbalanced-learn fails in testing when that autopkgtest is run with the
binary packages of imbalanced-learn from unstable. It passes when run
with only packages from testing. In tabular form:
pass fail
imbalanced-learn from testing 0.7.0-5
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration to testing [1]. Can
you please investigate the situation and fix it?
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=imbalanced-learn
https://ci.debian.net/data/autopkgtest/testing/amd64/i/imbalanced-learn/8034677/log.gz
autopkgtest [20:09:25]: test python3: [-----------------------
+ py3versions -rv
+ pys=3.8
+ exclude_tests=not test_rusboost
+ dpkg-architecture -e armhf
dpkg-architecture: warning: cannot determine CC system type, falling
back to default (native compilation)
+ python3.8 -m pytest -m not network -s -k not test_rusboost
============================= test session starts
==============================
platform linux -- Python 3.8.6, pytest-4.6.11, py-1.9.0, pluggy-0.13.0
rootdir: /tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src, inifile:
setup.cfg
plugins: doctestplus-0.7.0
collected 1536 items / 6 deselected / 4 skipped / 1526 selected
imblearn/base.py .
imblearn/pipeline.py ..
imblearn/combine/_smote_enn.py .
imblearn/combine/_smote_tomek.py .
imblearn/combine/tests/test_smote_enn.py ........
imblearn/combine/tests/test_smote_tomek.py .......
imblearn/datasets/_imbalance.py .
imblearn/datasets/tests/test_imbalance.py ......ssss
imblearn/datasets/tests/test_zenodo.py X.....
imblearn/ensemble/_bagging.py .
imblearn/ensemble/_easy_ensemble.py .
imblearn/ensemble/_forest.py .
imblearn/ensemble/_weight_boosting.py .
imblearn/ensemble/tests/test_bagging.py ...................
imblearn/ensemble/tests/test_easy_ensemble.py ..............
imblearn/ensemble/tests/test_forest.py .............
imblearn/keras/_generator.py ss
imblearn/metrics/_classification.py ......
imblearn/metrics/tests/test_classification.py
............................................
imblearn/metrics/tests/test_score_objects.py ................
imblearn/over_sampling/_adasyn.py .
imblearn/over_sampling/_random_over_sampler.py .
imblearn/over_sampling/_smote.py .....
imblearn/over_sampling/tests/test_adasyn.py .....
imblearn/over_sampling/tests/test_borderline_smote.py ...
imblearn/over_sampling/tests/test_kmeans_smote.py ..............
imblearn/over_sampling/tests/test_random_over_sampler.py .s.....
imblearn/over_sampling/tests/test_smote.py .....
imblearn/over_sampling/tests/test_smote_nc.py ...........s....
imblearn/over_sampling/tests/test_svm_smote.py .
imblearn/tests/test_base.py ...........
imblearn/tests/test_common.py
..................................................................................................x...s...........................s..............s..................................................................................................................................s................................................................................................................................................................................................................................................................................................s..............s....................................................................................................................................................................................................................................................................s...........s......s.s......s...........s...........s......s......s...........s...........s...........s........X..s........X..s........x..s...........s...........s......s......s...........s...........s...........s...........s...........s...........s...........s.....
imblearn/tests/test_exceptions.py .
imblearn/tests/test_pipeline.py
.......................________________________________________________________________________________
[Memory] Calling sklearn.pipeline._fit_transform_one...
_fit_transform_one(<imblearn.tests.test_pipeline.DummyTransf object at
0x7f38086195e0>, array([[ 5.1, ..., 0.2],
...,
[ 5.9, ..., 1.8]]), array([0, ..., 2]), None,
message_clsname='Pipeline', message=None)
________________________________________________fit_transform_one -
0.0s, 0.0min
[Memory]0.0s, 0.0min : Loading _fit_transform_one from
/tmp/tmpv29hrjxa/joblib/sklearn/pipeline/_fit_transform_one/c75d30258914a75a13b1bfaf5a80958d
___________________________________fit_transform_one cache loaded -
0.0s, 0.0min
[Memory]0.0s, 0.0min : Loading _fit_transform_one from
/tmp/tmpv29hrjxa/joblib/sklearn/pipeline/_fit_transform_one/c75d30258914a75a13b1bfaf5a80958d
___________________________________fit_transform_one cache loaded -
0.0s, 0.0min
.________________________________________________________________________________
[Memory] Calling imblearn.pipeline._fit_resample_one...
_fit_resample_one(<imblearn.tests.test_pipeline.DummySampler object at
0x7f380999fdc0>, array([[ 1.784347, ..., 1.567897],
...,
[-1.222391, ..., -0.334621]]),
array([1, ..., 1]), message_clsname='Pipeline', message=None)
_________________________________________________fit_resample_one -
0.0s, 0.0min
[Memory]0.8s, 0.0min : Loading _fit_resample_one from
/tmp/tmpkq2qbght/joblib/imblearn/pipeline/_fit_resample_one/ddda8cdf2815fcc615517bd1e7ff0181
____________________________________fit_resample_one cache loaded -
0.0s, 0.0min
[Memory]1.3s, 0.0min : Loading _fit_resample_one from
/tmp/tmpkq2qbght/joblib/imblearn/pipeline/_fit_resample_one/ddda8cdf2815fcc615517bd1e7ff0181
____________________________________fit_resample_one cache loaded -
0.0s, 0.0min
......................................
imblearn/under_sampling/_prototype_generation/_cluster_centroids.py .
imblearn/under_sampling/_prototype_generation/tests/test_cluster_centroids.py
..........
imblearn/under_sampling/_prototype_selection/_condensed_nearest_neighbour.py
s
imblearn/under_sampling/_prototype_selection/_edited_nearest_neighbours.py
...
imblearn/under_sampling/_prototype_selection/_instance_hardness_threshold.py
.
imblearn/under_sampling/_prototype_selection/_nearmiss.py .
imblearn/under_sampling/_prototype_selection/_neighbourhood_cleaning_rule.py
.
imblearn/under_sampling/_prototype_selection/_one_sided_selection.py .
imblearn/under_sampling/_prototype_selection/_random_under_sampler.py .
imblearn/under_sampling/_prototype_selection/_tomek_links.py .
imblearn/under_sampling/_prototype_selection/tests/test_allknn.py .....
imblearn/under_sampling/_prototype_selection/tests/test_condensed_nearest_neighbour.py
....
imblearn/under_sampling/_prototype_selection/tests/test_edited_nearest_neighbours.py
.....
imblearn/under_sampling/_prototype_selection/tests/test_instance_hardness_threshold.py
......
imblearn/under_sampling/_prototype_selection/tests/test_nearmiss.py ......
imblearn/under_sampling/_prototype_selection/tests/test_neighbourhood_cleaning_rule.py
.....
imblearn/under_sampling/_prototype_selection/tests/test_one_sided_selection.py
....
imblearn/under_sampling/_prototype_selection/tests/test_random_under_sampler.py
s.....
imblearn/under_sampling/_prototype_selection/tests/test_repeated_edited_nearest_neighbours.py
........
imblearn/under_sampling/_prototype_selection/tests/test_tomek_links.py ..
imblearn/utils/estimator_checks.py .
imblearn/utils/testing.py .
imblearn/utils/tests/test_deprecation.py .
imblearn/utils/tests/test_docstring.py ...
imblearn/utils/tests/test_estimator_checks.py .
imblearn/utils/tests/test_show_versions.py ...
imblearn/utils/tests/test_testing.py ..
imblearn/utils/tests/test_validation.py
..................................................s.
=========================== short test summary info
============================
SKIPPED [2]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/keras/tests/test_generator.py:9:
could not import 'keras': No module named 'keras'
SKIPPED [2]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/tensorflow/tests/test_generator.py:16:
could not import 'tensorflow': No module named 'tensorflow'
SKIPPED [4]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/datasets/tests/test_imbalance.py:70:
could not import 'pandas': No module named 'pandas'
SKIPPED [2]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/conftest.py:28: The
keras package is not installed.
SKIPPED [1]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/over_sampling/tests/test_random_over_sampler.py:46:
could not import 'pandas': No module named 'pandas'
SKIPPED [1]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/over_sampling/tests/test_smote_nc.py:182:
could not import 'pandas': No module named 'pandas'
SKIPPED [4] /usr/lib/python3/dist-packages/_pytest/nose.py:32: pandas is
not installed: not checking estimators for pandas objects.
SKIPPED [2] /usr/lib/python3/dist-packages/_pytest/nose.py:32: pandas is
not installed: not testing for input of type pandas.Series to class weight.
SKIPPED [22]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/utils/estimator_checks.py:263:
could not import 'pandas': No module named 'pandas'
SKIPPED [4]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/utils/estimator_checks.py:388:
could not import 'pandas': No module named 'pandas'
SKIPPED [1] /usr/lib/python3/dist-packages/_pytest/doctest.py:355: all
tests skipped by +SKIP option
SKIPPED [1]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/under_sampling/_prototype_selection/tests/test_random_under_sampler.py:37:
could not import 'pandas': No module named 'pandas'
SKIPPED [1]
/tmp/autopkgtest-lxc.40qgsakn/downtmp/build.rOo/src/imblearn/utils/tests/test_validation.py:344:
could not import 'pandas': No module named 'pandas'
= 1482 passed, 47 skipped, 6 deselected, 2 xfailed, 3 xpassed in 203.24
seconds =
autopkgtest [20:12:49]: test python3: -----------------------]
signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: imbalanced-learn
Source-Version: 0.7.0-6
Done: Christian Kastner <[email protected]>
We believe that the bug you reported is fixed in the latest version of
imbalanced-learn, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Christian Kastner <[email protected]> (supplier of updated imbalanced-learn
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 05 Dec 2020 14:57:22 +0100
Source: imbalanced-learn
Architecture: source
Version: 0.7.0-6
Distribution: unstable
Urgency: medium
Maintainer: NeuroDebian Team <[email protected]>
Changed-By: Christian Kastner <[email protected]>
Closes: 974088 976417
Changes:
imbalanced-learn (0.7.0-6) unstable; urgency=medium
.
* autopkgtest: Address stderr output. (Closes: #974088, #976417)
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