Your message dated Sun, 27 Dec 2020 21:48:47 +0100
with message-id <20201227204847.ga24...@xanadu.blop.info>
and subject line bug fixed in openmpi 4.1.0-2
has caused the Debian Bug report #978292,
regarding superlu-dist: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu &&
make -j1 test ARGS\+=-j1 returned exit code 2
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
978292: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=978292
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: superlu-dist
Version: 6.2.0+dfsg1-3
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20201226 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
> Running tests...
> /usr/bin/ctest --force-new-ctest-process -j1
> Test project /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
> Start 1: pdtest_1x1_1_2_8_20_SP
> 1/14 Test #1: pdtest_1x1_1_2_8_20_SP ...........***Failed 0.04 sec
> [ip-172-31-12-139:00795] [[25331,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 2: pdtest_1x1_3_2_8_20_SP
> 2/14 Test #2: pdtest_1x1_3_2_8_20_SP ...........***Failed 0.02 sec
> [ip-172-31-12-139:00796] [[25332,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 3: pdtest_1x2_1_2_8_20_SP
> 3/14 Test #3: pdtest_1x2_1_2_8_20_SP ...........***Failed 0.02 sec
> [ip-172-31-12-139:00797] [[25333,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 4: pdtest_1x2_3_2_8_20_SP
> 4/14 Test #4: pdtest_1x2_3_2_8_20_SP ...........***Failed 0.02 sec
> [ip-172-31-12-139:00798] [[25334,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 5: pdtest_2x1_1_2_8_20_SP
> 5/14 Test #5: pdtest_2x1_1_2_8_20_SP ...........***Failed 0.02 sec
> [ip-172-31-12-139:00799] [[25335,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 6: pdtest_2x1_3_2_8_20_SP
> 6/14 Test #6: pdtest_2x1_3_2_8_20_SP ...........***Failed 0.02 sec
> [ip-172-31-12-139:00800] [[25288,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 7: pdtest_2x2_1_2_8_20_SP
> 7/14 Test #7: pdtest_2x2_1_2_8_20_SP ...........***Failed 0.01 sec
> [ip-172-31-12-139:00801] [[25289,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 8: pdtest_2x2_3_2_8_20_SP
> 8/14 Test #8: pdtest_2x2_3_2_8_20_SP ...........***Failed 0.01 sec
> [ip-172-31-12-139:00802] [[25290,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 9: pddrive1
> 9/14 Test #9: pddrive1 .........................***Failed 0.02 sec
> [ip-172-31-12-139:00803] [[25291,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 10: pddrive2
> 10/14 Test #10: pddrive2 .........................***Failed 0.01 sec
> [ip-172-31-12-139:00804] [[25292,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 11: pddrive3
> 11/14 Test #11: pddrive3 .........................***Failed 0.02 sec
> [ip-172-31-12-139:00805] [[25293,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 12: pzdrive1
> 12/14 Test #12: pzdrive1 .........................***Failed 0.01 sec
> [ip-172-31-12-139:00806] [[25294,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 13: pzdrive2
> 13/14 Test #13: pzdrive2 .........................***Failed 0.02 sec
> [ip-172-31-12-139:00807] [[25295,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
> Start 14: pzdrive3
> 14/14 Test #14: pzdrive3 .........................***Failed 0.02 sec
> [ip-172-31-12-139:00808] [[25280,0],0] ORTE_ERROR_LOG: Not found in file
> ../../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 320
> --------------------------------------------------------------------------
> It looks like orte_init failed for some reason; your parallel process is
> likely to abort. There are many reasons that a parallel process can
> fail during orte_init; some of which are due to configuration or
> environment problems. This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>
> opal_pmix_base_select failed
> --> Returned value Not found (-13) instead of ORTE_SUCCESS
> --------------------------------------------------------------------------
>
>
> 0% tests passed, 14 tests failed out of 14
>
> Total Test time (real) = 0.24 sec
>
> The following tests FAILED:
> 1 - pdtest_1x1_1_2_8_20_SP (Failed)
> 2 - pdtest_1x1_3_2_8_20_SP (Failed)
> 3 - pdtest_1x2_1_2_8_20_SP (Failed)
> 4 - pdtest_1x2_3_2_8_20_SP (Failed)
> 5 - pdtest_2x1_1_2_8_20_SP (Failed)
> 6 - pdtest_2x1_3_2_8_20_SP (Failed)
> 7 - pdtest_2x2_1_2_8_20_SP (Failed)
> 8 - pdtest_2x2_3_2_8_20_SP (Failed)
> 9 - pddrive1 (Failed)
> 10 - pddrive2 (Failed)
> 11 - pddrive3 (Failed)
> 12 - pzdrive1 (Failed)
> 13 - pzdrive2 (Failed)
> 14 - pzdrive3 (Failed)
> Errors while running CTest
> make[2]: *** [Makefile:140: test] Error 8
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
> dh_auto_test: error: cd obj-x86_64-linux-gnu && make -j1 test ARGS\+=-j1
> returned exit code 2
The full build log is available from:
http://qa-logs.debian.net/2020/12/26/superlu-dist_6.2.0+dfsg1-3_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with me
so that we can identify if something relevant changed in the meantime.
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Hi,
This failure was caused by a bug in openmpi , fixed in openmpi 4.1.0-2.
so I'm closing this bug.
Lucas
--- End Message ---
