Your message dated Fri, 05 Feb 2021 16:19:04 +0000
with message-id <e1l83p2-000ecr...@fasolo.debian.org>
and subject line Bug#980694: fixed in sfepy 2020.4-1
has caused the Debian Bug report #980694,
regarding sfepy: FTBFS: Signal: Aborted (6)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
980694: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=980694
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: sfepy
Version: 2019.4-2.1
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20210120 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
> PYTHONPATH=.. sphinx-build -b html -d _build/doctrees . _build/html
> Running Sphinx v3.4.3
> making output directory... done
> building [mo]: targets for 0 po files that are out of date
> building [html]: targets for 230 source files that are out of date
> updating environment: [new config] 232 added, 0 changed, 0 removed
> reading sources... [ 0%] archived_news
> reading sources... [ 0%] archived_support
> reading sources... [ 1%] developer_guide
> reading sources... [ 1%] development
> reading sources... [ 2%] downloads
> reading sources... [ 2%] ebcs_implementation
> reading sources... [ 3%] examples
> reading sources... [ 3%] index
> reading sources... [ 3%] installation
> reading sources... [ 4%] introduction
> reading sources... [ 4%] license
> reading sources... [ 5%] linear_combination_bc
> reading sources... [ 5%] manpages
> reading sources... [ 6%] mat_optim
> reading sources... [ 6%] mat_optim/homogenization_opt_src
> reading sources... [ 6%] mat_optim/linear_elasticity_opt_src
> reading sources... [ 7%] mat_optim/material_opt_src
> reading sources... [ 7%] news
> reading sources... [ 8%] preprocessing
> reading sources... [ 8%] primer
> reading sources... [ 9%] problem_desc_file_long
> reading sources... [ 9%] release_notes
> reading sources... [ 9%] release_tasks
> reading sources... [ 10%] solver_table
> reading sources... [ 10%] solving_pdes_by_fem
> reading sources... [ 11%] splinebox
> reading sources... [ 11%] src/build_helpers
> reading sources... [ 12%] src/extractor
> reading sources... [ 12%] src/homogen
> reading sources... [ 12%] src/phonon
> A process has executed an operation involving a call
> to the fork() system call to create a child process.
>
> As a result, the libfabric EFA provider is operating in
> a condition that could result in memory corruption or
> other system errors.
>
> For the libfabric EFA provider to work safely when fork()
> is called, you will need to set the following environment
> variable:
> RDMAV_FORK_SAFE
>
> However, setting this environment variable can result in
> signficant performance impact to your application due to
> increased cost of memory registration.
>
> You may want to check with your application vendor to see
> if an application-level alternative (of not using fork)
> exists.
>
> Your job will now abort.
> [ip-172-31-13-40:07422] *** Process received signal ***
> [ip-172-31-13-40:07422] Signal: Aborted (6)
> [ip-172-31-13-40:07422] Signal code: (-6)
> [ip-172-31-13-40:07422] [ 0]
> /lib/x86_64-linux-gnu/libpthread.so.0(+0x14140)[0x7fc5caa9e140]
> [ip-172-31-13-40:07422] [ 1]
> /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x141)[0x7fc5ca763ce1]
> [ip-172-31-13-40:07422] [ 2]
> /lib/x86_64-linux-gnu/libc.so.6(abort+0x123)[0x7fc5ca74d537]
> [ip-172-31-13-40:07422] [ 3]
> /usr/lib/x86_64-linux-gnu/libfabric.so.1(+0x7c14e)[0x7fc5b930314e]
> [ip-172-31-13-40:07422] [ 4]
> /lib/x86_64-linux-gnu/libc.so.6(+0x85228)[0x7fc5ca7ad228]
> [ip-172-31-13-40:07422] [ 5]
> /lib/x86_64-linux-gnu/libc.so.6(__libc_fork+0x20)[0x7fc5ca7f3490]
> [ip-172-31-13-40:07422] [ 6] /usr/bin/python3[0x65306b]
> [ip-172-31-13-40:07422] [ 7] /usr/bin/python3[0x53f65a]
> [ip-172-31-13-40:07422] [ 8]
> /usr/bin/python3(_PyObject_MakeTpCall+0x39b)[0x51db7b]
> [ip-172-31-13-40:07422] [ 9]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x5b10)[0x5177f0]
> [ip-172-31-13-40:07422] [10] /usr/bin/python3[0x511237]
> [ip-172-31-13-40:07422] [11]
> /usr/bin/python3(_PyFunction_Vectorcall+0x361)[0x529051]
> [ip-172-31-13-40:07422] [12]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x701)[0x5123e1]
> [ip-172-31-13-40:07422] [13] /usr/bin/python3[0x511237]
> [ip-172-31-13-40:07422] [14]
> /usr/bin/python3(_PyFunction_Vectorcall+0x361)[0x529051]
> [ip-172-31-13-40:07422] [15] /usr/bin/python3[0x537a8e]
> [ip-172-31-13-40:07422] [16] /usr/bin/python3[0x51e0bf]
> [ip-172-31-13-40:07422] [17] /usr/bin/python3(PyObject_Call+0x129)[0x53c679]
> [ip-172-31-13-40:07422] [18]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x23ef)[0x5140cf]
> [ip-172-31-13-40:07422] [19] /usr/bin/python3[0x511237]
> [ip-172-31-13-40:07422] [20]
> /usr/bin/python3(_PyFunction_Vectorcall+0x361)[0x529051]
> [ip-172-31-13-40:07422] [21] /usr/bin/python3(PyObject_Call+0xc1)[0x53c611]
> [ip-172-31-13-40:07422] [22]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x23ef)[0x5140cf]
> [ip-172-31-13-40:07422] [23] /usr/bin/python3[0x511237]
> [ip-172-31-13-40:07422] [24]
> /usr/bin/python3(_PyFunction_Vectorcall+0x361)[0x529051]
> [ip-172-31-13-40:07422] [25]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x545b)[0x51713b]
> [ip-172-31-13-40:07422] [26]
> /usr/bin/python3(_PyFunction_Vectorcall+0x1a3)[0x528e93]
> [ip-172-31-13-40:07422] [27] /usr/bin/python3[0x63989b]
> [ip-172-31-13-40:07422] [28]
> /usr/bin/python3(_PyObject_MakeTpCall+0x39b)[0x51db7b]
> [ip-172-31-13-40:07422] [29]
> /usr/bin/python3(_PyEval_EvalFrameDefault+0x563b)[0x51731b]
> [ip-172-31-13-40:07422] *** End of error message ***
> Aborted
> make[3]: *** [Makefile:35: html] Error 134
The full build log is available from:
http://qa-logs.debian.net/2021/01/20/sfepy_2019.4-2.1_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with me
so that we can identify if something relevant changed in the meantime.
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: sfepy
Source-Version: 2020.4-1
Done: Anton Gladky <gl...@debian.org>
We believe that the bug you reported is fixed in the latest version of
sfepy, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 980...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Anton Gladky <gl...@debian.org> (supplier of updated sfepy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 05 Feb 2021 16:58:19 +0100
Source: sfepy
Architecture: source
Version: 2020.4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Anton Gladky <gl...@debian.org>
Closes: 857491 980694
Changes:
sfepy (2020.4-1) unstable; urgency=medium
.
* [9c85ee6] Add .gitlab-ci.yml
* [2c67d16] New upstream version 2020.4. (Closes: #857491)
* [9a29a8e] Refresh patches
* [2a96efe] Add python3-meshio as BD
* [8124d21] Add python3-sphinx-rtd-theme to BD
* [9506039] Fix autopkgtest. (Closes: #980694)
* [140b41d] Allow reprotest to fail
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Files:
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