Source: sra-sdk Version: 2.10.9+dfsg-2 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > g++ -static-libgcc -o > /<<PKGBUILDDIR>>/debian/tmp/usr/sra-tools/linux/gcc/x86_64/rel/bin/sratools.2.10.9 > -Wl,-z,relro -Wl,-z,now -DNDEBUG -m64 sratools.o sratools2.o > imp_fasterq_dump.o imp_fastq_dump.o imp_prefetch.o imp_sam_dump.o > imp_sra_pileup.o imp_srapath.o imp_vdb_dump.o cmdline.o config.o proc.o > run-source.o uuid.o service.o > -L/<<PKGBUILDDIR>>/debian/tmp/usr/sra-tools/linux/gcc/x86_64/rel/lib > -L/<<PKGBUILDDIR>>/debian/tmp/usr/sra-tools/linux/gcc/x86_64/rel/ilib > -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu > -L/usr/lib/x86_64-linux-gnu -lncbi-vdb -ljson -Wl,-Bdynamic -ldl -lpthread > -lxml2 -Wl,-Bdynamic -lm -lz -lbz2 -lsz -lmbedx509 -lmbedtls -lmbedcrypto > /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to > `ZSTD_freeDCtx' > /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to > `ZSTD_decompressDCtx' > /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to > `ZSTD_createDCtx' > /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to > `ZSTD_isError' > /usr/bin/ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to > `ZSTD_getErrorName' > collect2: error: ld returned 1 exit status The full build log is available from: http://qa-logs.debian.net/2021/10/23/sra-sdk_2.10.9+dfsg-2_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
