Your message dated Wed, 22 Dec 2021 09:49:31 +0000
with message-id <e1mzyfx-00098h...@fasolo.debian.org>
and subject line Bug#1002230: fixed in pplacer 1.1~alpha19-6
has caused the Debian Bug report #1002230,
regarding Ocaml build error: expression was expected of type
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1002230: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1002230
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: pplacer
Version: 1.1~alpha19-5
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20211220 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[3]: Entering directory '/<<PKGBUILDDIR>>'
> ocamlbuild guppy.native
> /bin/sh: 1: git: not found
> File "_tags", line 8, characters 154-161:
> Warning: the tag "pkg_str" is not used in any flag or dependency declaration,
> so it will have no effect; it may be a typo. Otherwise you can use
> `mark_tag_used` in your myocamlbuild.ml to disable this warning.
> File "_tags", line 8, characters 112-124:
> Warning: the tag "pkg_bigarray" is not used in any flag or dependency
> declaration, so it will have no effect; it may be a typo. Otherwise you can
> use `mark_tag_used` in your myocamlbuild.ml to disable this warning.
> File "_tags", line 8, characters 102-110:
> Warning: the tag "pkg_unix" is not used in any flag or dependency
> declaration, so it will have no effect; it may be a typo. Otherwise you can
> use `mark_tag_used` in your myocamlbuild.ml to disable this warning.
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy.ml >
> pplacer_src/guppy.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_commands.ml > pplacer_src/guppy_commands.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_adcl.ml
> > pplacer_src/guppy_adcl.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_cmdobjs.ml > pplacer_src/guppy_cmdobjs.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/mass_map.ml >
> pplacer_src/mass_map.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/mokaphy_common.ml > pplacer_src/mokaphy_common.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/tax_mass.ml >
> pplacer_src/tax_mass.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mass_map.cmo pplacer_src/mass_map.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules common_src/uptri.ml >
> common_src/uptri.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/tax_mass.cmo pplacer_src/tax_mass.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src
> -I tests -I pplacer_src -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> common_src/uptri.cmo common_src/uptri.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/visualization.ml > pplacer_src/visualization.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/voronoi.mli >
> pplacer_src/voronoi.mli.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mokaphy_common.cmo pplacer_src/mokaphy_common.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/visualization.cmo pplacer_src/visualization.ml
> ocamlfind ocamlc -c -package batteries -package csv -package xmlm -package
> gsl -package sqlite3 -package zip -package mcl -thread -I pplacer_src -I
> tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I common_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/voronoi.cmi pplacer_src/voronoi.mli
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_cmdobjs.cmo pplacer_src/guppy_cmdobjs.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_bary.ml
> > pplacer_src/guppy_bary.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/barycenter.ml
> > pplacer_src/barycenter.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/kr_distance.ml > pplacer_src/kr_distance.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/kr_distance.cmo pplacer_src/kr_distance.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/barycenter.cmo pplacer_src/barycenter.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_check.ml > pplacer_src/guppy_check.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_classify.ml > pplacer_src/guppy_classify.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/bayes_factor.ml > pplacer_src/bayes_factor.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_to_rdp.ml > pplacer_src/guppy_to_rdp.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/nbc.mli >
> pplacer_src/nbc.mli.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/bayes_factor.cmo pplacer_src/bayes_factor.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_to_rdp.cmo pplacer_src/guppy_to_rdp.ml
> ocamlfind ocamlc -c -package batteries -package csv -package xmlm -package
> gsl -package sqlite3 -package zip -package mcl -thread -I pplacer_src -I
> tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I common_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/nbc.cmi pplacer_src/nbc.mli
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_compress.ml > pplacer_src/guppy_compress.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_mcl.ml
> > pplacer_src/guppy_mcl.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/mass_overlap.ml > pplacer_src/mass_overlap.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mass_overlap.cmo pplacer_src/mass_overlap.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/mass_compress.ml > pplacer_src/mass_compress.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/mass_islands.ml > pplacer_src/mass_islands.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_mcl.cmo pplacer_src/guppy_mcl.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mass_compress.cmo pplacer_src/mass_compress.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mass_islands.cmo pplacer_src/mass_islands.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_demulti.ml > pplacer_src/guppy_demulti.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_distmat.ml > pplacer_src/guppy_distmat.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/edge_rdist.ml
> > pplacer_src/edge_rdist.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/edge_rdist.cmo pplacer_src/edge_rdist.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_edpl.ml
> > pplacer_src/guppy_edpl.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/edpl.ml >
> pplacer_src/edpl.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/edpl.cmo pplacer_src/edpl.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_epca.ml
> > pplacer_src/guppy_epca.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_pca.ml
> > pplacer_src/guppy_pca.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_splitify.ml > pplacer_src/guppy_splitify.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_splitify.cmo pplacer_src/guppy_splitify.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/pca.ml >
> pplacer_src/pca.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> common_src/power_iteration.ml > common_src/power_iteration.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I common_src
> -I tests -I pplacer_src -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> common_src/power_iteration.cmo common_src/power_iteration.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/som.ml >
> pplacer_src/som.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/pca.cmo pplacer_src/pca.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_pca.cmo pplacer_src/guppy_pca.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/som.cmo pplacer_src/som.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_error.ml > pplacer_src/guppy_error.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_fat.ml
> > pplacer_src/guppy_fat.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/tax_gtree.ml
> > pplacer_src/tax_gtree.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/tax_gtree.cmo pplacer_src/tax_gtree.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_filter.ml > pplacer_src/guppy_filter.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_classify.cmo pplacer_src/guppy_classify.ml
> + ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_classify.cmo pplacer_src/guppy_classify.ml
> File "pplacer_src/guppy_classify.ml", line 683, characters 20-33:
> 683 | let splut = String.nsplit line "\t" |> Array.of_list in
> ^^^^^^^^^^^^^
> Alert deprecated: Ppatteries.String.nsplit
> Use split_on_string instead.
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_fpd.ml
> > pplacer_src/guppy_fpd.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_heat.ml
> > pplacer_src/guppy_heat.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_indep_c.ml > pplacer_src/guppy_indep_c.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/indep_contrasts.ml > pplacer_src/indep_contrasts.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/indep_contrasts.cmo pplacer_src/indep_contrasts.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_info.ml
> > pplacer_src/guppy_info.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_islands.ml > pplacer_src/guppy_islands.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_kr.ml >
> pplacer_src/guppy_kr.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/gaussian_approx.ml > pplacer_src/gaussian_approx.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/r_plots.ml >
> pplacer_src/r_plots.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/gaussian_approx.cmo pplacer_src/gaussian_approx.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/r_plots.cmo pplacer_src/r_plots.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_kr_heat.ml > pplacer_src/guppy_kr_heat.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_lpca.ml
> > pplacer_src/guppy_lpca.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/lpca.ml >
> pplacer_src/lpca.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/lpca.cmo pplacer_src/lpca.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_merge.ml > pplacer_src/guppy_merge.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_mft.ml
> > pplacer_src/guppy_mft.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_ograph.ml > pplacer_src/guppy_ograph.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_placemat.ml > pplacer_src/guppy_placemat.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_pmlpca.ml > pplacer_src/guppy_pmlpca.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_rarefact.ml > pplacer_src/guppy_rarefact.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/rarefaction.ml > pplacer_src/rarefaction.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/rarefaction.cmo pplacer_src/rarefaction.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_rarefy.ml > pplacer_src/guppy_rarefy.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_redup.ml > pplacer_src/guppy_redup.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_round.ml > pplacer_src/guppy_round.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_sing.ml
> > pplacer_src/guppy_sing.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_squash.ml > pplacer_src/guppy_squash.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/bootstrap.ml
> > pplacer_src/bootstrap.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_round.cmo pplacer_src/guppy_round.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/squashfunc.ml
> > pplacer_src/squashfunc.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/bootstrap.cmo pplacer_src/bootstrap.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/squashfunc.cmo pplacer_src/squashfunc.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_to_csv.ml > pplacer_src/guppy_to_csv.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_to_json.ml > pplacer_src/guppy_to_json.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_tog.ml
> > pplacer_src/guppy_tog.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/guppy_trim.ml
> > pplacer_src/guppy_trim.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules
> pplacer_src/guppy_unifrac.ml > pplacer_src/guppy_unifrac.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_adcl.cmo pplacer_src/guppy_adcl.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_bary.cmo pplacer_src/guppy_bary.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_check.cmo pplacer_src/guppy_check.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_compress.cmo pplacer_src/guppy_compress.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_demulti.cmo pplacer_src/guppy_demulti.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_distmat.cmo pplacer_src/guppy_distmat.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_edpl.cmo pplacer_src/guppy_edpl.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_epca.cmo pplacer_src/guppy_epca.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_error.cmo pplacer_src/guppy_error.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_fat.cmo pplacer_src/guppy_fat.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_filter.cmo pplacer_src/guppy_filter.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_fpd.cmo pplacer_src/guppy_fpd.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_heat.cmo pplacer_src/guppy_heat.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_indep_c.cmo pplacer_src/guppy_indep_c.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_info.cmo pplacer_src/guppy_info.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_islands.cmo pplacer_src/guppy_islands.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_kr.cmo pplacer_src/guppy_kr.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_kr_heat.cmo pplacer_src/guppy_kr_heat.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_lpca.cmo pplacer_src/guppy_lpca.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_merge.cmo pplacer_src/guppy_merge.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_mft.cmo pplacer_src/guppy_mft.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_ograph.cmo pplacer_src/guppy_ograph.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_placemat.cmo pplacer_src/guppy_placemat.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_pmlpca.cmo pplacer_src/guppy_pmlpca.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_rarefact.cmo pplacer_src/guppy_rarefact.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_rarefy.cmo pplacer_src/guppy_rarefy.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_redup.cmo pplacer_src/guppy_redup.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_sing.cmo pplacer_src/guppy_sing.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_squash.cmo pplacer_src/guppy_squash.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_to_csv.cmo pplacer_src/guppy_to_csv.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_to_json.cmo pplacer_src/guppy_to_json.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_tog.cmo pplacer_src/guppy_tog.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_trim.cmo pplacer_src/guppy_trim.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_unifrac.cmo pplacer_src/guppy_unifrac.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy_commands.cmo pplacer_src/guppy_commands.ml
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/guppy.cmo pplacer_src/guppy.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mass_map.cmx pplacer_src/mass_map.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/tax_mass.cmx pplacer_src/tax_mass.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> common_src -I tests -I pplacer_src -I json_src -I cdd_src -I pdprune_src -I
> pam_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> common_src/uptri.cmx common_src/uptri.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pplacer_src/voronoi.ml >
> pplacer_src/voronoi.ml.depends
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules cdd_src/cdd.ml >
> cdd_src/cdd.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I cdd_src -I
> tests -I pplacer_src -I json_src -I pdprune_src -I pam_src -I common_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o cdd_src/cdd.cmo
> cdd_src/cdd.ml
> ocamlfind ocamldep -package batteries -package csv -package xmlm -package gsl
> -package sqlite3 -package zip -package mcl -modules pam_src/pam_solver.ml >
> pam_src/pam_solver.ml.depends
> ocamlfind ocamlc -c -annot -w Z -package batteries -package csv -package xmlm
> -package gsl -package sqlite3 -package zip -package mcl -thread -I pam_src -I
> tests -I pplacer_src -I json_src -I cdd_src -I pdprune_src -I common_src -I
> tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pam_src/pam_solver.cmo pam_src/pam_solver.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/edge_rdist.cmx pplacer_src/edge_rdist.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> cdd_src -I tests -I pplacer_src -I json_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> cdd_src/cdd.cmx cdd_src/cdd.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/kr_distance.cmx pplacer_src/kr_distance.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pam_src -I tests -I pplacer_src -I json_src -I cdd_src -I pdprune_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pam_src/pam_solver.cmx pam_src/pam_solver.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/mokaphy_common.cmx pplacer_src/mokaphy_common.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/visualization.cmx pplacer_src/visualization.ml
> ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/voronoi.cmx pplacer_src/voronoi.ml
> + ocamlfind ocamlopt -c -annot -w Z -package batteries -package csv -package
> xmlm -package gsl -package sqlite3 -package zip -package mcl -thread -I
> pplacer_src -I tests -I json_src -I cdd_src -I pdprune_src -I pam_src -I
> common_src -I tests/json -I tests/guppy -I tests/pplacer -I tests/rppr -o
> pplacer_src/voronoi.cmx pplacer_src/voronoi.ml
> File "pplacer_src/voronoi.ml", line 547, characters 34-42:
> 547 | let map_min f l = List.map f l |> List.min
> ^^^^^^^^
> Error: This expression has type
> ?cmp:('weak10 -> 'weak10 -> int) -> 'weak10 list -> 'weak10
> but an expression was expected of type 'weak7 list -> 'weak9
> Command exited with code 2.
> make[3]: *** [Makefile:21: guppy.native] Error 10
The full build log is available from:
http://qa-logs.debian.net/2021/12/20/pplacer_1.1~alpha19-5_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: pplacer
Source-Version: 1.1~alpha19-6
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
pplacer, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1002...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated pplacer package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 22 Dec 2021 10:13:03 +0100
Source: pplacer
Architecture: source
Version: 1.1~alpha19-6
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1002230
Changes:
pplacer (1.1~alpha19-6) unstable; urgency=medium
.
* Fix ocaml build issue
Closes: #1002230
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