Source: oscar4 Version: 5.1.2+dfsg-1 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: [email protected] Usertags: ftbfs-20220624 ftbfs-bookworm
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > ln -fs /usr/share/EMBOSS/data/OBO/chebi.obo > oscar4-obo/src/main/resources/uk/ac/cam/ch/wwmm/oscar/obo/terms/chebi.obo > ln -s oscar4-tokeniser oscar4-tokenizer > dh_auto_configure > mh_patchpoms -pliboscar4-java --debian-build --keep-pom-version > --maven-repo=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg/debian/maven-repo > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_auto_build > /usr/lib/jvm/default-java/bin/java -noverify -cp > /usr/share/maven/boot/plexus-classworlds-2.x.jar > -Dmaven.home=/usr/share/maven > -Dmaven.multiModuleProjectDirectory=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg > -Dclassworlds.conf=/etc/maven/m2-debian.conf > org.codehaus.plexus.classworlds.launcher.Launcher > -s/etc/maven/settings-debian.xml > -Ddebian.dir=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg/debian > -Dmaven.repo.local=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg/debian/maven-repo > --batch-mode package -DskipTests -Dnotimestamp=true -Dlocale=en_US > [INFO] Scanning for projects... > [INFO] > ------------------------------------------------------------------------ > [INFO] Reactor Build Order: > [INFO] > [INFO] oscar4-parent > [pom] > [INFO] oscar4-core > [jar] > [INFO] Chemical Name Dictionaries > [jar] > [INFO] oscar4-obo > [jar] > [INFO] oscar4-tokenizer > [jar] > [INFO] oscar4-recogniser-core > [jar] > [INFO] oscar4-memmrecogniser > [jar] > [INFO] oscar4-patternrecogniser > [jar] > [INFO] oscar4-opsin > [jar] > [INFO] oscar4-api > [jar] > [INFO] oscar4-preprocessor > [jar] > [INFO] oscar4-formatter > [jar] > [INFO] oscar4-data > [jar] > [INFO] > [INFO] -------------------< uk.ac.cam.ch.wwmm.oscar:oscar4 > >------------------- > [INFO] Building oscar4-parent 5.1.2 > [1/13] > [INFO] --------------------------------[ pom > ]--------------------------------- > [INFO] > [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-maven) @ oscar4 --- > [INFO] > [INFO] ----------------< uk.ac.cam.ch.wwmm.oscar:oscar4-core > >----------------- > [INFO] Building oscar4-core 5.1.2 > [2/13] > [INFO] --------------------------------[ jar > ]--------------------------------- > [INFO] > [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-maven) @ > oscar4-core --- > [INFO] > [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ > oscar4-core --- > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 11 resources > [INFO] > [INFO] --- maven-compiler-plugin:3.8.1:compile (default-compile) @ > oscar4-core --- > [INFO] Changes detected - recompiling the module! > [INFO] Compiling 29 source files to > /<<PKGBUILDDIR>>/oscar4-core/target/classes > Use of target 1.6 is no longer supported, switching to 7 > Use of source 1.6 is no longer supported, switching to 7 > [INFO] > /<<PKGBUILDDIR>>/oscar4-core/src/main/java/uk/ac/cam/ch/wwmm/oscar/document/NamedEntity.java: > > /<<PKGBUILDDIR>>/oscar4-core/src/main/java/uk/ac/cam/ch/wwmm/oscar/document/NamedEntity.java > uses or overrides a deprecated API. > [INFO] > /<<PKGBUILDDIR>>/oscar4-core/src/main/java/uk/ac/cam/ch/wwmm/oscar/document/NamedEntity.java: > Recompile with -Xlint:deprecation for details. > [INFO] > [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) > @ oscar4-core --- > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 6 resources > [INFO] > [INFO] --- maven-compiler-plugin:3.8.1:testCompile (default-testCompile) @ > oscar4-core --- > [INFO] Changes detected - recompiling the module! > [INFO] Compiling 14 source files to > /<<PKGBUILDDIR>>/oscar4-core/target/test-classes > Use of target 1.6 is no longer supported, switching to 7 > Use of source 1.6 is no longer supported, switching to 7 > [INFO] > [INFO] --- maven-surefire-plugin:2.22.3:test (default-test) @ oscar4-core --- > [INFO] Tests are skipped. > [INFO] > [INFO] --- maven-jar-plugin:3.1.2:jar (default-jar) @ oscar4-core --- > [INFO] Building jar: /<<PKGBUILDDIR>>/oscar4-core/target/oscar4-core-5.1.2.jar > [INFO] > [INFO] ------------< uk.ac.cam.ch.wwmm.oscar:oscar4-chemnamedict > >------------- > [INFO] Building Chemical Name Dictionaries 5.1.2 > [3/13] > [INFO] --------------------------------[ jar > ]--------------------------------- > [INFO] > [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-maven) @ > oscar4-chemnamedict --- > [INFO] > [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ > oscar4-chemnamedict --- > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 3 resources > [INFO] > [INFO] --- maven-compiler-plugin:3.8.1:compile (default-compile) @ > oscar4-chemnamedict --- > [INFO] Changes detected - recompiling the module! > [INFO] Compiling 26 source files to > /<<PKGBUILDDIR>>/oscar4-chemnamedict/target/classes > Use of target 1.6 is no longer supported, switching to 7 > Use of source 1.6 is no longer supported, switching to 7 > [INFO] > /<<PKGBUILDDIR>>/oscar4-chemnamedict/src/main/java/uk/ac/cam/ch/wwmm/oscar/chemnamedict/core/ImmutableChemNameDict.java: > Some input files use or override a deprecated API. > [INFO] > /<<PKGBUILDDIR>>/oscar4-chemnamedict/src/main/java/uk/ac/cam/ch/wwmm/oscar/chemnamedict/core/ImmutableChemNameDict.java: > Recompile with -Xlint:deprecation for details. > [INFO] > [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) > @ oscar4-chemnamedict --- > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 1 resource > [INFO] > [INFO] --- maven-compiler-plugin:3.8.1:testCompile (default-testCompile) @ > oscar4-chemnamedict --- > [INFO] Changes detected - recompiling the module! > [INFO] Compiling 10 source files to > /<<PKGBUILDDIR>>/oscar4-chemnamedict/target/test-classes > Use of target 1.6 is no longer supported, switching to 7 > Use of source 1.6 is no longer supported, switching to 7 > [INFO] > [INFO] --- maven-surefire-plugin:2.22.3:test (default-test) @ > oscar4-chemnamedict --- > [INFO] Tests are skipped. > [INFO] > [INFO] --- maven-jar-plugin:3.1.2:jar (default-jar) @ oscar4-chemnamedict --- > [INFO] Building jar: > /<<PKGBUILDDIR>>/oscar4-chemnamedict/target/oscar4-chemnamedict-5.1.2.jar > [INFO] > [INFO] -----------------< uk.ac.cam.ch.wwmm.oscar:oscar4-obo > >----------------- > [INFO] Building oscar4-obo 5.1.2 > [4/13] > [INFO] --------------------------------[ jar > ]--------------------------------- > [INFO] > [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-maven) @ > oscar4-obo --- > [INFO] > [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ > oscar4-obo --- > [INFO] Using 'UTF-8' encoding to copy filtered resources. > [INFO] Copying 6 resources > [INFO] > ------------------------------------------------------------------------ > [INFO] Reactor Summary for oscar4-parent 5.1.2: > [INFO] > [INFO] oscar4-parent ...................................... SUCCESS [ 0.265 > s] > [INFO] oscar4-core ........................................ SUCCESS [ 2.015 > s] > [INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.748 > s] > [INFO] oscar4-obo ......................................... FAILURE [ 0.023 > s] > [INFO] oscar4-tokenizer ................................... SKIPPED > [INFO] oscar4-recogniser-core ............................. SKIPPED > [INFO] oscar4-memmrecogniser .............................. SKIPPED > [INFO] oscar4-patternrecogniser ........................... SKIPPED > [INFO] oscar4-opsin ....................................... SKIPPED > [INFO] oscar4-api ......................................... SKIPPED > [INFO] oscar4-preprocessor ................................ SKIPPED > [INFO] oscar4-formatter ................................... SKIPPED > [INFO] oscar4-data ........................................ SKIPPED > [INFO] > ------------------------------------------------------------------------ > [INFO] BUILD FAILURE > [INFO] > ------------------------------------------------------------------------ > [INFO] Total time: 3.178 s > [INFO] Finished at: 2022-06-24T05:47:03Z > [INFO] > ------------------------------------------------------------------------ > [ERROR] Failed to execute goal > org.apache.maven.plugins:maven-resources-plugin:3.1.0:resources > (default-resources) on project oscar4-obo: > /<<PKGBUILDDIR>>/oscar4-obo/target/classes/uk/ac/cam/ch/wwmm/oscar/obo/terms/chebi.obo: > Operation not permitted -> [Help 1] > [ERROR] > [ERROR] To see the full stack trace of the errors, re-run Maven with the -e > switch. > [ERROR] Re-run Maven using the -X switch to enable full debug logging. > [ERROR] > [ERROR] For more information about the errors and possible solutions, please > read the following articles: > [ERROR] [Help 1] > http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException > [ERROR] > [ERROR] After correcting the problems, you can resume the build with the > command > [ERROR] mvn <args> -rf :oscar4-obo > dh_auto_build: error: /usr/lib/jvm/default-java/bin/java -noverify -cp > /usr/share/maven/boot/plexus-classworlds-2.x.jar > -Dmaven.home=/usr/share/maven > -Dmaven.multiModuleProjectDirectory=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg > -Dclassworlds.conf=/etc/maven/m2-debian.conf > org.codehaus.plexus.classworlds.launcher.Launcher > -s/etc/maven/settings-debian.xml > -Ddebian.dir=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg/debian > -Dmaven.repo.local=/<<BUILDDIR>>/oscar4-5.1.2\+dfsg/debian/maven-repo > --batch-mode package -DskipTests -Dnotimestamp=true -Dlocale=en_US returned > exit code 1 > make: *** [debian/rules:4: binary] Error 25 The full build log is available from: http://qa-logs.debian.net/2022/06/24/oscar4_5.1.2+dfsg-1_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220624;[email protected] or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220624&[email protected]&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please marking it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
