Your message dated Tue, 06 Dec 2022 07:04:09 +0000
with message-id <e1p2rzt-00bhj6...@fasolo.debian.org>
and subject line Bug#1024914: fixed in hickle 5.0.2-3
has caused the Debian Bug report #1024914,
regarding hickle: (autopkgtest) needs update for python3.11: property 'dtype'
of 'Dataset' object has no setter
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1024914: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1024914
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hickle
Version: 5.0.2-2
Severity: serious
Tags: sid bookworm
User: debian...@lists.debian.org
Usertags: needs-update
User: debian-pyt...@lists.debian.org
Usertags: python3.11
Control: affects -1 src:python3-defaults
Dear maintainer(s),
We are in the transition of adding python3.11 as a supported Python
version [0]. With a recent upload of python3-defaults the autopkgtest of
hickle fails in testing when that autopkgtest is run with the binary
packages of python3-defaults from unstable. It passes when run with only
packages from testing. In tabular form:
pass fail
python3-defaults from testing 3.10.6-3
hickle from testing 5.0.2-2
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration of python3-defaults
to testing [1]. https://docs.python.org/3/whatsnew/3.11.html lists
what's new in Python3.11, it may help to identify what needs to be updated.
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[0] https://bugs.debian.org/1021984
[1] https://qa.debian.org/excuses.php?package=python3-defaults
https://ci.debian.net/data/autopkgtest/testing/amd64/h/hickle/28726232/log.gz
=================================== FAILURES
===================================
____________________________ test_H5NodeFilterProxy
____________________________
h5_data = <HDF5 file "hickle_helpers_test_H5NodeFilterProxy.hdf5" (mode r)>
def test_H5NodeFilterProxy(h5_data):
"""
tests H5NodeFilterProxy class. This class allows to temporarily
rewrite
attributes of h5py.Group and h5py.Dataset nodes before being
loaded by
hickle._load method.
"""
# load data and try to directly modify 'type' and
'base_type' Attributes
# which will fail cause hdf5 file is opened for read only
h5_node = h5_data['somedata']
with pytest.raises(OSError):
try:
h5_node.attrs['type'] = pickle.dumps(list)
except RuntimeError as re:
raise OSError(re).with_traceback(re.__traceback__)
with pytest.raises(OSError):
try:
h5_node.attrs['base_type'] = b'list'
except RuntimeError as re:
raise OSError(re).with_traceback(re.__traceback__)
# verify that 'type' expands to tuple before running
# the remaining tests
object_type = pickle.loads(h5_node.attrs['type'])
assert object_type is tuple
assert object_type(h5_node[()].tolist()) == dummy_data
# Wrap node by H5NodeFilterProxy and rerun the above tests
# again. This time modifying Attributes shall be possible.
h5_node = H5NodeFilterProxy(h5_node)
h5_node.attrs['type'] = pickle.dumps(list)
h5_node.attrs['base_type'] = b'list'
object_type = pickle.loads(h5_node.attrs['type'])
assert object_type is list
# test proper pass through of item and attribute access
# to wrapped h5py.Group or h5py.Dataset object respective
assert object_type(h5_node[()].tolist()) == list(dummy_data)
assert h5_node.shape == np.array(dummy_data).shape
with pytest.raises(AttributeError,match =
r"can't\s+set\s+attribute"):
h5_node.dtype = np.float32
/tmp/autopkgtest-lxc.j_xof7x9/downtmp/build.8IK/src/hickle/tests/test_01_hickle_helpers.py:154:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _ _
self = <hickle.helpers.H5NodeFilterProxy object at 0x7f5593aeb050>
name = 'dtype', value = <class 'numpy.float32'>
def __setattr__(self, name, value):
# if wrapped _h5_node and attrs shall be set store value on
local attributes
# otherwise pass on to wrapped _h5_node
if name in {'_h5_node'}:
super().__setattr__(name, value)
return
if name in {'attrs'}: # pragma: no cover
raise AttributeError('attribute is read-only')
_h5_node = super().__getattribute__('_h5_node')
setattr(_h5_node, name, value)
E AttributeError: property 'dtype' of 'Dataset' object has no setter
/tmp/autopkgtest-lxc.j_xof7x9/downtmp/build.8IK/src/hickle/helpers.py:180:
AttributeError
During handling of the above exception, another exception occurred:
h5_data = <HDF5 file "hickle_helpers_test_H5NodeFilterProxy.hdf5" (mode r)>
def test_H5NodeFilterProxy(h5_data):
"""
tests H5NodeFilterProxy class. This class allows to temporarily
rewrite
attributes of h5py.Group and h5py.Dataset nodes before being
loaded by
hickle._load method.
"""
# load data and try to directly modify 'type' and
'base_type' Attributes
# which will fail cause hdf5 file is opened for read only
h5_node = h5_data['somedata']
with pytest.raises(OSError):
try:
h5_node.attrs['type'] = pickle.dumps(list)
except RuntimeError as re:
raise OSError(re).with_traceback(re.__traceback__)
with pytest.raises(OSError):
try:
h5_node.attrs['base_type'] = b'list'
except RuntimeError as re:
raise OSError(re).with_traceback(re.__traceback__)
# verify that 'type' expands to tuple before running
# the remaining tests
object_type = pickle.loads(h5_node.attrs['type'])
assert object_type is tuple
assert object_type(h5_node[()].tolist()) == dummy_data
# Wrap node by H5NodeFilterProxy and rerun the above tests
# again. This time modifying Attributes shall be possible.
h5_node = H5NodeFilterProxy(h5_node)
h5_node.attrs['type'] = pickle.dumps(list)
h5_node.attrs['base_type'] = b'list'
object_type = pickle.loads(h5_node.attrs['type'])
assert object_type is list
# test proper pass through of item and attribute access
# to wrapped h5py.Group or h5py.Dataset object respective
assert object_type(h5_node[()].tolist()) == list(dummy_data)
assert h5_node.shape == np.array(dummy_data).shape
with pytest.raises(AttributeError,match = r"can't\s+set\s+attribute"):
E AssertionError: Regex pattern "can't\\s+set\\s+attribute" does
not match "property 'dtype' of 'Dataset' object has no setter".
/tmp/autopkgtest-lxc.j_xof7x9/downtmp/build.8IK/src/hickle/tests/test_01_hickle_helpers.py:153:
AssertionError
=========================== short test summary info
============================
FAILED hickle/tests/test_01_hickle_helpers.py::test_H5NodeFilterProxy -
Asser...
!!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 1 failures
!!!!!!!!!!!!!!!!!!!!!!!!!!!
========================= 1 failed, 2 passed in 0.99s
==========================
autopkgtest [17:14:14]: test run-tests
OpenPGP_signature
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: hickle
Source-Version: 5.0.2-3
Done: Edward Betts <edw...@4angle.com>
We believe that the bug you reported is fixed in the latest version of
hickle, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1024...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Edward Betts <edw...@4angle.com> (supplier of updated hickle package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 06 Dec 2022 06:37:21 +0000
Source: hickle
Architecture: source
Version: 5.0.2-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team <team+pyt...@tracker.debian.org>
Changed-By: Edward Betts <edw...@4angle.com>
Closes: 1024914
Changes:
hickle (5.0.2-3) unstable; urgency=medium
.
* Fix test that failed under Python 3.11. (Closes: #1024914)
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