Source: neuron Version: 7.6.3-1 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20221220 ftbfs-bookworm
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[5]: Entering directory '/<<PKGBUILDDIR>>' > echo "enter install-exec-hook in nrn/Makefile.am" > enter install-exec-hook in nrn/Makefile.am > if test "--verbose --home=/<<PKGBUILDDIR>>/debian/tmp/usr" != "no" ; then \ > cd src/nrnpython ; \ > /usr/bin/python3 setup.py install --verbose > --home=/<<PKGBUILDDIR>>/debian/tmp/usr ;\ > fi > running install > /usr/lib/python3/dist-packages/setuptools/command/install.py:34: > SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and > pip and other standards-based tools. > warnings.warn( > /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:146: > EasyInstallDeprecationWarning: easy_install command is deprecated. Use build > and pip and other standards-based tools. > warnings.warn( > Checking .pth file support in /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/ > /usr/bin/python3 -E -c pass > TEST FAILED: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/ does NOT support > .pth files > bad install directory or PYTHONPATH > > You are attempting to install a package to a directory that is not > on PYTHONPATH and which Python does not read ".pth" files from. The > installation directory you specified (via --install-dir, --prefix, or > the distutils default setting) was: > > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/ > > and your PYTHONPATH environment variable currently contains: > > '' > > Here are some of your options for correcting the problem: > > * You can choose a different installation directory, i.e., one that is > on PYTHONPATH or supports .pth files > > * You can add the installation directory to the PYTHONPATH environment > variable. (It must then also be on PYTHONPATH whenever you run > Python and want to use the package(s) you are installing.) > > * You can set up the installation directory to support ".pth" files by > using one of the approaches described here: > > > https://setuptools.pypa.io/en/latest/deprecated/easy_install.html#custom-installation-locations > > > Please make the appropriate changes for your system and try again. > running bdist_egg > running egg_info > creating /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info > writing > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/PKG-INFO > writing dependency_links to > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/dependency_links.txt > writing top-level names to > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/top_level.txt > writing manifest file > '/<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/SOURCES.txt' > reading manifest file > '/<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/SOURCES.txt' > writing manifest file > '/<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/SOURCES.txt' > installing library code to build/bdist.linux-x86_64/egg > running install_lib > running build_py > creating build > creating build/lib.linux-x86_64-cpython-310 > creating build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/__init__.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/doc.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/nonvint_block_supervisor.py > -> build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/hclass3.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/hclass2.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/psection.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui.py -> > build/lib.linux-x86_64-cpython-310/neuron > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/sections.py -> > build/lib.linux-x86_64-cpython-310/neuron > creating build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/xml2nrn.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/metadata.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/rdxml.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/morphml.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/neuroml.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/neuroml/biophysics.py > -> build/lib.linux-x86_64-cpython-310/neuron/neuroml > creating build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/test_rxd.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/test_neuron.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/test_all.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/_subclass.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/tests/test_vector.py > -> build/lib.linux-x86_64-cpython-310/neuron/tests > creating build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/reaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/plugins.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rate.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/options.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rxdmath.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rxdsection.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/nodelist.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rxdException.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/dimension3.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/initializer.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/species.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/morphology.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/generalizedReaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/section1d.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/gui.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rxd.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/multiCompartmentReaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/rangevar.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/region.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/node.py -> > build/lib.linux-x86_64-cpython-310/neuron/rxd > creating build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/reaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/plugins.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rate.py -> > build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/options.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rxdmath.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rxdsection.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/nodelist.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rxdException.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/dimension3.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/initializer.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/species.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/generalizedReaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/section1d.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/gui.py -> > build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rxd.py -> > build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/multiCompartmentReaction.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/rangevar.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/region.py -> > build/lib.linux-x86_64-cpython-310/neuron/crxd > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/node.py -> > build/lib.linux-x86_64-cpython-310/neuron/crxd > creating build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/setup_threejs.py > -> build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/plotshape.py > -> build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/config.py -> > build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/rangevar.py > -> build/lib.linux-x86_64-cpython-310/neuron/gui2 > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/gui2/utilities.py > -> build/lib.linux-x86_64-cpython-310/neuron/gui2 > creating build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/setup.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/scalarField.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/triangularMesh.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/voxelize2.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/setup_local.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/voxelize.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/rxd/geometry3d/surface.py > -> build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d > creating build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/__init__.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/setup.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/scalarField.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/triangularMesh.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/voxelize2.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/setup_local.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/voxelize.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/neuron/crxd/geometry3d/surface.py > -> build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d > running build_ext > building 'neuron.hoc' extension > creating build/temp.linux-x86_64-cpython-310 > mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g > -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g > -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC > -I../.././src/oc -I../oc -I../.././src/nrnmpi -I/usr/include/python3.10 -c > inithoc.cpp -o build/temp.linux-x86_64-cpython-310/inithoc.o > mpic++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro > -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 > build/temp.linux-x86_64-cpython-310/inithoc.o > ../.././src/sparse13/libsparse13.a ../.././src/sundials/libsundials.a > -L/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu > -L/<<PKGBUILDDIR>>/debian/tmp_iv/usr/lib/x86_64-linux-gnu > -L/usr/lib/x86_64-linux-gnu -lnrnpython -lnrnoc -loc -lnrniv -livoc -lmemacs > -lmeschach -lneuron_gnu -lnrnmpi -lscopmath -lreadline -lIVhines -o > build/lib.linux-x86_64-cpython-310/neuron/hoc.cpython-310-x86_64-linux-gnu.so > -Wl,-R/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu > -Wl,-R/<<PKGBUILDDIR>>/debian/tmp_iv/usr/lib/x86_64-linux-gnu > creating build/bdist.linux-x86_64 > creating build/bdist.linux-x86_64/egg > creating build/bdist.linux-x86_64/egg/neuron > copying build/lib.linux-x86_64-cpython-310/neuron/__init__.py -> > build/bdist.linux-x86_64/egg/neuron > copying > build/lib.linux-x86_64-cpython-310/neuron/hoc.cpython-310-x86_64-linux-gnu.so > -> build/bdist.linux-x86_64/egg/neuron > copying build/lib.linux-x86_64-cpython-310/neuron/doc.py -> > build/bdist.linux-x86_64/egg/neuron > creating build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/reaction.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/__init__.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/plugins.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rate.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/options.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rxdmath.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rxdsection.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/nodelist.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rxdException.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/dimension3.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/initializer.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/species.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/generalizedReaction.py > -> build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/section1d.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/gui.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rxd.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > creating build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/__init__.py > -> build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/setup.py -> > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/scalarField.py -> > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/triangularMesh.py > -> build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/voxelize2.py -> > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/setup_local.py -> > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/voxelize.py > -> build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/geometry3d/surface.py > -> build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/crxd/multiCompartmentReaction.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/rangevar.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/region.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/crxd/node.py -> > build/bdist.linux-x86_64/egg/neuron/crxd > copying build/lib.linux-x86_64-cpython-310/neuron/nonvint_block_supervisor.py > -> build/bdist.linux-x86_64/egg/neuron > creating build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/__init__.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/setup_threejs.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/plotshape.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/config.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/rangevar.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/gui2/utilities.py -> > build/bdist.linux-x86_64/egg/neuron/gui2 > copying build/lib.linux-x86_64-cpython-310/neuron/hclass3.py -> > build/bdist.linux-x86_64/egg/neuron > creating build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/reaction.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/__init__.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/plugins.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rate.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/options.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rxdmath.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rxdsection.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/nodelist.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rxdException.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/dimension3.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/initializer.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/species.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/morphology.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/generalizedReaction.py > -> build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/section1d.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/gui.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rxd.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > creating build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/__init__.py > -> build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/setup.py -> > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/scalarField.py -> > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/triangularMesh.py -> > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/voxelize2.py > -> build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/setup_local.py -> > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/voxelize.py > -> build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/geometry3d/surface.py > -> build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d > copying > build/lib.linux-x86_64-cpython-310/neuron/rxd/multiCompartmentReaction.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/rangevar.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/region.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > copying build/lib.linux-x86_64-cpython-310/neuron/rxd/node.py -> > build/bdist.linux-x86_64/egg/neuron/rxd > creating build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/__init__.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/xml2nrn.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/metadata.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/rdxml.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/morphml.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/neuroml.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/neuroml/biophysics.py -> > build/bdist.linux-x86_64/egg/neuron/neuroml > copying build/lib.linux-x86_64-cpython-310/neuron/hclass2.py -> > build/bdist.linux-x86_64/egg/neuron > copying build/lib.linux-x86_64-cpython-310/neuron/psection.py -> > build/bdist.linux-x86_64/egg/neuron > copying build/lib.linux-x86_64-cpython-310/neuron/gui.py -> > build/bdist.linux-x86_64/egg/neuron > creating build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/__init__.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/test_rxd.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/test_neuron.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/test_all.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/_subclass.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/tests/test_vector.py -> > build/bdist.linux-x86_64/egg/neuron/tests > copying build/lib.linux-x86_64-cpython-310/neuron/sections.py -> > build/bdist.linux-x86_64/egg/neuron > byte-compiling build/bdist.linux-x86_64/egg/neuron/__init__.py to > __init__.cpython-310.pyc > build/bdist.linux-x86_64/egg/neuron/__init__.py:420: SyntaxWarning: "is" with > a literal. Did you mean "=="? > if len(nt_dlls) is 0: > build/bdist.linux-x86_64/egg/neuron/__init__.py:422: SyntaxWarning: "is" with > a literal. Did you mean "=="? > if h.nrnversion(8).find('i686') is 0: > byte-compiling build/bdist.linux-x86_64/egg/neuron/doc.py to > doc.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/reaction.py to > reaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/plugins.py to > plugins.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rate.py to > rate.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/options.py to > options.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rxdmath.py to > rxdmath.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rxdsection.py to > rxdsection.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/geometry.py to > geometry.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/nodelist.py to > nodelist.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rxdException.py to > rxdException.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/dimension3.py to > dimension3.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/initializer.py to > initializer.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/species.py to > species.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/generalizedReaction.py to > generalizedReaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/section1d.py to > section1d.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/gui.py to > gui.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rxd.py to > rxd.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/setup.py > to setup.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/scalarField.py to > scalarField.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/triangularMesh.py to > triangularMesh.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/voxelize2.py to > voxelize2.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/setup_local.py to > setup_local.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/voxelize.py to > voxelize.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/geometry3d/surface.py > to surface.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/crxd/multiCompartmentReaction.py to > multiCompartmentReaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/rangevar.py to > rangevar.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/region.py to > region.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/crxd/node.py to > node.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/nonvint_block_supervisor.py to > nonvint_block_supervisor.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/setup_threejs.py to > setup_threejs.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/plotshape.py to > plotshape.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/config.py to > config.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/rangevar.py to > rangevar.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui2/utilities.py to > utilities.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/hclass3.py to > hclass3.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/reaction.py to > reaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/plugins.py to > plugins.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rate.py to > rate.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/options.py to > options.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rxdmath.py to > rxdmath.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rxdsection.py to > rxdsection.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/geometry.py to > geometry.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/nodelist.py to > nodelist.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rxdException.py to > rxdException.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/dimension3.py to > dimension3.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/initializer.py to > initializer.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/species.py to > species.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/morphology.py to > morphology.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/generalizedReaction.py > to generalizedReaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/section1d.py to > section1d.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/gui.py to > gui.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rxd.py to > rxd.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/__init__.py > to __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/setup.py to > setup.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/scalarField.py to > scalarField.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/triangularMesh.py to > triangularMesh.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/voxelize2.py to > voxelize2.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/setup_local.py to > setup_local.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/voxelize.py > to voxelize.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/geometry3d/surface.py > to surface.cpython-310.pyc > byte-compiling > build/bdist.linux-x86_64/egg/neuron/rxd/multiCompartmentReaction.py to > multiCompartmentReaction.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/rangevar.py to > rangevar.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/region.py to > region.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/rxd/node.py to > node.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/xml2nrn.py to > xml2nrn.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/metadata.py to > metadata.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/rdxml.py to > rdxml.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/morphml.py to > morphml.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/neuroml.py to > neuroml.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/neuroml/biophysics.py to > biophysics.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/hclass2.py to > hclass2.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/psection.py to > psection.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/gui.py to > gui.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/__init__.py to > __init__.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/test_rxd.py to > test_rxd.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/test_neuron.py to > test_neuron.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/test_all.py to > test_all.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/_subclass.py to > _subclass.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/tests/test_vector.py to > test_vector.cpython-310.pyc > byte-compiling build/bdist.linux-x86_64/egg/neuron/sections.py to > sections.cpython-310.pyc > creating stub loader for neuron/hoc.cpython-310-x86_64-linux-gnu.so > byte-compiling build/bdist.linux-x86_64/egg/neuron/hoc.py to > hoc.cpython-310.pyc > installing package data to build/bdist.linux-x86_64/egg > running install_data > copying ../.././share/lib/python/neuron/help_data.dat -> > build/bdist.linux-x86_64/egg/neuron > creating build/bdist.linux-x86_64/egg/EGG-INFO > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/PKG-INFO > -> build/bdist.linux-x86_64/egg/EGG-INFO > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/SOURCES.txt > -> build/bdist.linux-x86_64/egg/EGG-INFO > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/dependency_links.txt > -> build/bdist.linux-x86_64/egg/EGG-INFO > copying > /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python/NEURON.egg-info/top_level.txt > -> build/bdist.linux-x86_64/egg/EGG-INFO > writing build/bdist.linux-x86_64/egg/EGG-INFO/native_libs.txt > zip_safe flag not set; analyzing archive contents... > neuron.__pycache__.__init__.cpython-310: module references __file__ > neuron.__pycache__.doc.cpython-310: module references __file__ > neuron.__pycache__.hoc.cpython-310: module references __file__ > creating dist > creating 'dist/NEURON-7.6-py3.10-linux-x86_64.egg' and adding > 'build/bdist.linux-x86_64/egg' to it > removing 'build/bdist.linux-x86_64/egg' (and everything under it) > Processing NEURON-7.6-py3.10-linux-x86_64.egg > creating > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/NEURON-7.6-py3.10-linux-x86_64.egg > Extracting NEURON-7.6-py3.10-linux-x86_64.egg to > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/NEURON-7.6-py3.10-linux-x86_64.egg/neuron/__init__.py:420: > SyntaxWarning: "is" with a literal. Did you mean "=="? > if len(nt_dlls) is 0: > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/NEURON-7.6-py3.10-linux-x86_64.egg/neuron/__init__.py:422: > SyntaxWarning: "is" with a literal. Did you mean "=="? > if h.nrnversion(8).find('i686') is 0: > > Installed > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/NEURON-7.6-py3.10-linux-x86_64.egg > Processing dependencies for NEURON==7.6 > Finished processing dependencies for NEURON==7.6 > if test "no" != "no" ; then \ > sh bin/nrndiagnose.sh ; \ > fi > echo "leave install-exec-hook in nrn/Makefile.am" > leave install-exec-hook in nrn/Makefile.am > make[5]: Leaving directory '/<<PKGBUILDDIR>>' > /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu' > /usr/bin/install -c -m 644 nrnconf.h > '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu' > /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn' > /usr/bin/install -c libtool '/<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn' > make[4]: Leaving directory '/<<PKGBUILDDIR>>' > make[3]: Leaving directory '/<<PKGBUILDDIR>>' > make[2]: Leaving directory '/<<PKGBUILDDIR>>' > mkdir /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/ivhines/ > cp -a /<<PKGBUILDDIR>>/debian/tmp_iv/usr/lib/x86_64-linux-gnu/*.so.* > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/ivhines/ > # the .la files are needed by nrnivmodl and possibly other tools compiling > NEURON models > sed -i "/dependency_libs/ s/'.*'/''/" `find > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/ -name '*.la'` > # duplicates and arch-dependent > rm -r /<<PKGBUILDDIR>>/debian/tmp/usr/share/nrn/lib/python > # don't ship these extra binaries > rm /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/memacs > rm /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/neurondemo > # remove (unneeded? misplaced?) header > rm /<<PKGBUILDDIR>>/debian/tmp/usr/lib/*/nrnconf.h > # fix Python interface location > mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/ > mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/* > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/ > rmdir /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python/ > # add links to important NEURON binaries > mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ > ln -s /usr/lib/neuron/bin/nrngui /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ > ln -s /usr/lib/neuron/bin/nrniv /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ > ln -s /usr/lib/neuron/bin/nrnoc /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ > ln -s /usr/lib/neuron/bin/nrnivmodl /<<PKGBUILDDIR>>/debian/tmp/usr/bin/ > # fix permissions > chmod -x /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/*_makefile > # fix rpaths > chrpath -r /usr/lib/x86_64-linux-gnu/ivhines/ > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/ivoc > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/ivoc: > RUNPATH=/<<PKGBUILDDIR>>/debian/tmp_iv/usr/lib/x86_64-linux-gnu > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/ivoc: new RUNPATH: > /usr/lib/x86_64-linux-gnu/ivhines/ > chrpath -r /usr/lib/x86_64-linux-gnu/ivhines/ > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/nrniv > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/nrniv: > RUNPATH=/<<PKGBUILDDIR>>/debian/tmp_iv/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/neuron/bin/nrniv: new RUNPATH: > /usr/lib/x86_64-linux-gnu/ivhines/ > chrpath -r /usr/lib/x86_64-linux-gnu/ivhines/ > /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/neuron/hoc.cpython*.so > open: No such file or directory > elf_open: Invalid argument > make[1]: *** [debian/rules:70: override_dh_auto_install] Error 1 The full build log is available from: http://qa-logs.debian.net/2022/12/20/neuron_7.6.3-1_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20221220;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20221220&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
