Your message dated Mon, 23 Jan 2023 19:49:49 +0000
with message-id <[email protected]>
and subject line Bug#1027192: fixed in binoculars 0.0.12-1.1
has caused the Debian Bug report #1027192,
regarding binoculars: FTBFS: AttributeError: module 'numpy' has no attribute
'bool'. Unable to parse configuration option 'maskmatrix'. The error can quite
likely be solved by modifying the option in the configuration file.
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1027192: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1027192
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: binoculars
Version: 0.0.12-1
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: [email protected]
Usertags: ftbfs-20230120 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_test -- --system=custom --test-args='{interpreter} -m unittest
> discover -s tests -t {dir} -v'
> pybuild --test -i python{version} -p 3.11 --system=custom
> "--test-args={interpreter} -m unittest discover -s tests -t {dir} -v"
> I: pybuild base:240: python3.11 -m unittest discover -s tests -t
> /<<PKGBUILDDIR>> -v
> test_IO (tests.test_cfg.TestCase.test_IO) ... ok
> test_IO (tests.test_id03.TestCase.test_IO) ...
> /<<PKGBUILDDIR>>/binoculars/backends/id03.py:1177: FutureWarning: In the
> future `np.bool` will be defined as the corresponding NumPy scalar. (This
> may have returned Python scalars in past versions.
> return numpy.array(numpy.load(filename), dtype=numpy.bool)
> ERROR
> test_IO (tests.test_metadata.MetaDataTestCase.test_IO) ... expected failure
>
> ======================================================================
> ERROR: test_IO (tests.test_id03.TestCase.test_IO)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File "/<<PKGBUILDDIR>>/tests/test_id03.py", line 24, in setUp
> self.id03input = id03.EH2(cfg_unparsed)
> ^^^^^^^^^^^^^^^^^^^^^^
> File "/<<PKGBUILDDIR>>/binoculars/util.py", line 744, in __init__
> self.parse_config(config)
> File "/<<PKGBUILDDIR>>/binoculars/backends/id03.py", line 909, in
> parse_config
> super(EH2, self).parse_config(config)
> File "/<<PKGBUILDDIR>>/binoculars/backends/id03.py", line 478, in
> parse_config
> self.config.maskmatrix = load_matrix(
> ^^^^^^^^^^^^
> File "/<<PKGBUILDDIR>>/binoculars/backends/id03.py", line 1177, in
> load_matrix
> return numpy.array(numpy.load(filename), dtype=numpy.bool)
> ^^^^^^^^^^
> File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 284, in
> __getattr__
> raise AttributeError("module {!r} has no attribute "
> AttributeError: module 'numpy' has no attribute 'bool'. Unable to parse
> configuration option 'maskmatrix'. The error can quite likely be solved by
> modifying the option in the configuration file.
>
> ----------------------------------------------------------------------
> Ran 3 tests in 0.065s
>
> FAILED (errors=1, expected failures=1)
> ConfigFile{
> [dispatcher]
> destination = b'demo_{first}-{last}.hdf5'
> overwrite = b'true'
> type = b'local'
> [projection]
> resolution = b'0.002, 0.002, 1'
> type = b'id03:hklprojection'
> [input]
> centralpixel = b'40, 255'
> imagefolder = b'/path/to/data/images/{rUCCD[0]}/'
> pixelsize = b'0.055, 0.055'
> sdd = b'1050'
> specfile = b'/path/to/data/file.spec'
> target_weight = b'4000'
> type = b'id03:eh1'
> xmask = b'50-235'
> ymask = b'185-253,262-400'
> }
> origin = test.hdf5
> command =
> MetaBase{
> [first]
> string = string
> numpy.array = [0 1 2 3 4 5 6 7 8 9]
> list = range(0, 10)
> tuple = (0, 1, 2, 3, 4, 5, 6, 7, 8, 9)
> }
>
> Space (3 dimensions, 1331 points, 20.8 kB) {
> Axis h (min=0.0, max=10.0, res=1.0, count=11)
> Axis k (min=0.0, max=10.0, res=1.0, count=11)
> Axis l (min=0.0, max=10.0, res=1.0, count=11)
> }
> E: pybuild pybuild:388: test: plugin custom failed with: exit code=1:
> python3.11 -m unittest discover -s tests -t /<<PKGBUILDDIR>> -v
> rm -fr -- /tmp/dh-xdg-rundir-D4gM_IpQ
> dh_auto_test: error: pybuild --test -i python{version} -p 3.11
> --system=custom "--test-args={interpreter} -m unittest discover -s tests -t
> {dir} -v" returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2023/01/20/binoculars_0.0.12-1_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230120;[email protected]
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230120&[email protected]&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: binoculars
Source-Version: 0.0.12-1.1
Done: Bas Couwenberg <[email protected]>
We believe that the bug you reported is fixed in the latest version of
binoculars, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Bas Couwenberg <[email protected]> (supplier of updated binoculars package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 11 Jan 2023 17:48:13 +0100
Source: binoculars
Built-For-Profiles: noudeb
Architecture: source
Version: 0.0.12-1.1
Distribution: unstable
Urgency: medium
Maintainer: Debian PaN Maintainers
<[email protected]>
Changed-By: Bas Couwenberg <[email protected]>
Closes: 1027192
Changes:
binoculars (0.0.12-1.1) unstable; urgency=medium
.
* Non-maintainer upload.
* Add patch to fix test failure with Numpy 1.24.
(closes: #1027192)
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