Your message dated Wed, 23 Aug 2023 15:30:50 +0000
with message-id <e1qypoo-0013xc...@fasolo.debian.org>
and subject line Bug#1049359: Removed package(s) from unstable
has caused the Debian Bug report #1024661,
regarding r-bioc-bitseq: orphaned upstream and blocking BioC 3.16 transition
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
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immediately.)
--
1024661: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1024661
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-bioc-bitseq
Version: 1.40.0+dfsg-1
Severity: critical
Tags: ftbfs
Justification: breaks unrelated software
X-Debbugs-Cc: 1023...@bugs.debian.org, debia...@lists.debian.org
As per upstream
https://lists.debian.org/debian-r/2022/11/msg00058.html
r-bioc-bitseq is not supported any more. It does not build against the
packages that are part of the BioC 3.16 release (namely r-bioc-rhtslib
which does not contain the header file bam.h any more)
Before we might remove r-bioc-bitseq finally from Debian we want to give
interested people a chance to fix the code but this bug should remove the
package from testing to not block the BioC 3.16 transition.
Kind regards
Andreas.
-- System Information:
Debian Release: bookworm/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (50, 'buildd-unstable'), (1,
'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.0.0-4-amd64 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
Version: 1.40.0+dfsg-1+rm
Dear submitter,
as the package r-bioc-bitseq has just been removed from the Debian archive
unstable we hereby close the associated bug reports. We are sorry
that we couldn't deal with your issue properly.
For details on the removal, please see https://bugs.debian.org/1049359
The version of this package that was in Debian prior to this removal
can still be found using https://snapshot.debian.org/.
Please note that the changes have been done on the master archive and
will not propagate to any mirrors until the next dinstall run at the
earliest.
This message was generated automatically; if you believe that there is
a problem with it please contact the archive administrators by mailing
ftpmas...@ftp-master.debian.org.
Debian distribution maintenance software
pp.
Scott Kitterman (the ftpmaster behind the curtain)
--- End Message ---
