Your message dated Fri, 19 Jan 2024 17:40:12 +0000
with message-id <e1rqsqi-009dtd...@fasolo.debian.org>
and subject line Bug#1061049: fixed in suitesparse 1:7.5.1+dfsg-2
has caused the Debian Bug report #1061049,
regarding suitesparse breaks octave autopkgtest: it hangs
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: suitesparse, octave
Control: found -1 suitesparse/1:7.5.1+dfsg-1
Control: found -1 octave/8.4.0-1
Severity: serious
Tags: sid trixie
User: debian...@lists.debian.org
Usertags: breaks needs-update
Dear maintainer(s),
With a recent upload of suitesparse the autopkgtest of octave fails in
testing when that autopkgtest is run with the binary packages of
suitesparse from unstable. It passes when run with only packages from
testing. In tabular form:
pass fail
suitesparse from testing 1:7.5.1+dfsg-1
octave from testing 8.4.0-1
all others from testing from testing
I copied some of the output at the bottom of this report. Normally the
test only takes a couple of minutes, now it times out after 2:47 hours.
I'm notifying you already as this is currently also impacting the perl
transition via texinfo.
Currently this regression is blocking the migration of suitesparse to
testing [1]. Due to the nature of this issue, I filed this bug report
against both packages. Can you please investigate the situation and
reassign the bug to the right package?
More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul
[1] https://qa.debian.org/excuses.php?package=suitesparse
https://ci.debian.net/data/autopkgtest/testing/amd64/o/octave/41870107/log.gz
94s 94s Integrated test scripts:
94s 94s liboctave/array/Array-base.cc-tst
.............................. pass 21/21 94s
liboctave/array/CMatrix.cc-tst ................................. pass
11/11 94s liboctave/array/CSparse.cc-tst
................................. pass 10/10 94s
liboctave/array/Sparse.cc-tst .................................. pass
107/107 94s liboctave/array/dMatrix.cc-tst
................................. pass 10/10 94s
liboctave/array/dSparse.cc-tst ................................. pass
12/12 94s liboctave/array/fCMatrix.cc-tst
................................ pass 11/11 94s
liboctave/array/fMatrix.cc-tst ................................. pass
8/8 94s liboctave/array/idx-vector.cc-tst
.............................. pass 2/2 94s
liboctave/util/oct-inttypes.cc-tst ............................. pass
28/28 94s libinterp/corefcn/Cell.cc-tst
.................................. pass 5/5 94s
libinterp/corefcn/__contourc__.cc-tst .......................... pass
1/1 94s libinterp/corefcn/__dsearchn__.cc-tst
.......................... pass 1/1 94s
libinterp/corefcn/__eigs__.cc-tst .............................. pass
1/1 94s libinterp/corefcn/__ichol__.cc-tst
............................. pass 1/1 94s
libinterp/corefcn/__ilu__.cc-tst ............................... pass
1/1 95s libinterp/corefcn/__isprimelarge__.cc-tst
...................... pass 10/10 95s
libinterp/corefcn/__lin_interpn__.cc-tst ....................... pass
1/1 95s libinterp/corefcn/__magick_read__.cc-tst
....................... pass 4/4 95s
libinterp/corefcn/__pchip_deriv__.cc-tst ....................... pass
4/4 95s libinterp/corefcn/__qp__.cc-tst
................................ pass 1/1 95s
libinterp/corefcn/amd.cc-tst ................................... pass
4/4 95s libinterp/corefcn/besselj.cc-tst
............................... pass 200/200 96s
libinterp/corefcn/bitfcns.cc-tst ............................... pass
60/60 100s libinterp/corefcn/bsxfun.cc-tst
................................ pass 82/82 100s
libinterp/corefcn/call-stack.cc-tst ............................ pass
3/3 102s libinterp/corefcn/cellfun.cc-tst
............................... pass 134/134 102s
libinterp/corefcn/chol.cc-tst
..................................malloc(): invalid size (unsorted)
10094s fatal: caught signal autopkgtest [06:55:22]: ERROR: timed out on
command "su -s /bin/bash debci -c set -e; exec
/tmp/autopkgtest-lxc.gixhwtgb/downtmp/wrapper.sh
--artifacts=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/upstream-testsuite-artifacts
--chdir=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/build.byz/src
--env=DEB_BUILD_OPTIONS=parallel=64 --env=DEBIAN_FRONTEND=noninteractive
--env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS
--unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE
--unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT
--unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME
--unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE
--unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid
--source-profile
--stderr=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/upstream-testsuite-stderr
--stdout=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/upstream-testsuite-stdout
--tmp=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/autopkgtest_tmp
--make-executable=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/build.byz/src/debian/tests/upstream-testsuite
--
/tmp/autopkgtest-lxc.gixhwtgb/downtmp/build.byz/src/debian/tests/upstream-testsuite"
(kind: test)
10094s autopkgtest [06:55:22]: test upstream-testsuite
OpenPGP_signature.asc
Description: OpenPGP digital signature
--- End Message ---
--- Begin Message ---
Source: suitesparse
Source-Version: 1:7.5.1+dfsg-2
Done: Sébastien Villemot <sebast...@debian.org>
We believe that the bug you reported is fixed in the latest version of
suitesparse, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1061...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sébastien Villemot <sebast...@debian.org> (supplier of updated suitesparse
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 19 Jan 2024 17:54:36 +0100
Source: suitesparse
Architecture: source
Version: 1:7.5.1+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team
<debian-science-maintain...@lists.alioth.debian.org>
Changed-By: Sébastien Villemot <sebast...@debian.org>
Closes: 1061049
Changes:
suitesparse (1:7.5.1+dfsg-2) unstable; urgency=medium
.
* cholmod-abi-fix.patch: new patch taken from upstream.
Reverts ABI break introduced in suitesparse 1:7.4.0+dfsg-1.
(Closes: #1061049)
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suitesparse_7.5.1+dfsg-2.debian.tar.xz
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Files:
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suitesparse_7.5.1+dfsg-2.dsc
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--- End Message ---
