Bug#1085956: marked as done (orange-spectroscopy: FTBFS: AttributeError: 'TestCommonIndpSamplesMixin' object has no attribute 'preprocessors')

Fri, 01 Nov 2024 04:48:23 -0700 

Your message dated Fri, 01 Nov 2024 11:44:13 +0000
with message-id <[email protected]>
and subject line Bug#1085956: fixed in orange-spectroscopy 0.7.2-2
has caused the Debian Bug report #1085956,
regarding orange-spectroscopy: FTBFS: AttributeError: 
'TestCommonIndpSamplesMixin' object has no attribute 'preprocessors'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
1085956: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1085956
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message --- 
Package: src:orange-spectroscopy
Version: 0.7.2-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:

--------------------------------------------------------------------------------
[...]
 debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" 
module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel 
--outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy
* Building wheel...
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: 
Unknown distribution option: 'test_suite'
  warnings.warn(msg)
/usr/lib/python3/dist-packages/setuptools/dist.py:655: 
SetuptoolsDeprecationWarning: The namespace_packages parameter is deprecated.
!!


[... snipped ...]

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 37 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_editor_normalize.py:
 24 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 10 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 37 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _NormalizeCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_editor_normalize.py:
 2 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 42 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_editor_normalize.py:
 2 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 42 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _NormalizeReferenceCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_emsc.py:
 12 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_emsc.py: 12 warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/emsc.py:140:
 RuntimeWarning: invalid value encountered in divide
    corrected = corrected/m[self.order+1+n_badspec]

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_integrate.py:
 72 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py:
 38 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owintegrate.py:
 19 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py:
 1 warning
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 7 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 13 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py:
 2 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_integrate.py: 72 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owhyper.py: 38 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owintegrate.py: 18 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpeakfit.py: 1 
warning
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 13 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_tile_reader.py: 2 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/integrate.py:28:
 UserWarning: _IntegrateCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_irfft.py::TestIRFFT::test_agilent_fft_ab
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_irfft.py:97:
 RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_irfft.py::TestIRFFT::test_multi_ab
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_irfft.py:134:
 RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_me_emsc.py:
 6 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_me_emsc.py: 6 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/me_emsc.py:142:
 RuntimeWarning: invalid value encountered in divide
    corrected = corrected / m[1 + self.ncomp]

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owalignstack.py::test_image
  /usr/lib/python3/dist-packages/_pytest/python.py:163: 
PytestReturnNotNoneWarning: Expected None, but 
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owalignstack.py::test_image
 returned array([[0., 1., 0., 0., 0., 0., 1.],
         [0., 0., 5., 0., 0., 0., 1.],
         [0., 0., 0., 3., 0., 0., 1.],
         [0., 0., 0., 0., 1., 0., 1.],
         [0., 0., 0., 0., 0., 1., 1.]]), which will be an error in a future 
version of pytest.  Did you mean to use `assert` instead of `return`?
    warnings.warn(

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owfft.py::TestOWFFT::test_calculation
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owfft.py:111:
 RuntimeWarning: invalid value encountered in log10
    calc_abs = np.log10(rsc.X / ssc.X)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestReadCoordinates::test_index_nan
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestOWHyper::test_strange
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py::TestOWHyper::test_unknown_values_axes
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owhyper.py::TestReadCoordinates::test_index_nan
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owhyper.py::TestOWHyper::test_strange
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owhyper.py::TestOWHyper::test_unknown_values_axes
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/__init__.py:68:
 RuntimeWarning: invalid value encountered in cast
    return np.round(positions).astype(int), np.isnan(positions)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py:
 25 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpeakfit.py: 25 
warnings
  /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: 
This process (pid=98007) is multi-threaded, use of fork() may lead to deadlocks 
in the child.
    self.pid = os.fork()

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
  /usr/lib/python3/dist-packages/asteval/asteval.py:942: RuntimeWarning: 
overflow encountered in exp
    out = func(*args, **keywords)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
  /usr/lib/python3/dist-packages/asteval/astutils.py:274: RuntimeWarning: 
invalid value encountered in scalar subtract
    ast.Sub: lambda a, b: a - b,

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py:
 22 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpls.py: 22 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:51:
 UserWarning: _PLSCommonTransform should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(transform)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py:
 22 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpls.py: 22 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:90:
 UserWarning: PLSProjector should define __eq__ and __hash__ to be used for compute_value
  or set InheritEq = True if inherited methods suffice
    return ContinuousVariable(name, compute_value=PLSProjector(transformer, i))

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py:
 19 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpls.py: 19 
warnings
  /usr/lib/python3/dist-packages/orangewidget/gui.py:2068: UserWarning: 
decorate OWPLS.apply with @gui.deferred and then explicitly call apply.now or 
apply.deferred.
    warnings.warn(

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 6 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 9 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 9 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _PCAReconstructCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 7 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 52 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py:
 2 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 52 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_tile_reader.py: 2 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _TransmittanceCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 7 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 10 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 10 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _ShiftAndScaleCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 6 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 6 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 6 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _MNFCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 7 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py:
 18 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_xas.py: 18 warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _XASnormalizationCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py:
 4 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py:
 11 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py: 4 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_xas.py: 11 warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _ExtractEXAFSCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestPCADenoising::test_no_samples
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestMNFDenoising::test_no_samples
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestPCADenoising::test_no_samples
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestMNFDenoising::test_no_samples
  /usr/lib/python3/dist-packages/Orange/data/table.py:214: UserWarning: <class 
'numpy.ndarray'> must return a column, not 2d array
    warnings.warn(err)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/preprocessors/atm_corr.py:108:
 RuntimeWarning: All-NaN slice encountered
    self.preview_data_max = np.nanmax(spectra_mean(data.X))

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owspectralseries.py:
 14 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owspectralseries.py:
 14 warnings
  /usr/lib/python3/dist-packages/Orange/widgets/gui.py:480: DeprecationWarning: 
Argument 'valueType' is deprecated and ignored
    warnings.warn("Argument 'valueType' is deprecated and ignored",

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 42 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 42 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _SpSubtractCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 5 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 5 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:97:
 RuntimeWarning: divide by zero encountered in divide
    transd = data.X / ref_X

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestTransmittance::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestTransmittance::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:97:
 RuntimeWarning: invalid value encountered in divide
    transd = data.X / ref_X

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 51 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py:
 2 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 51 
warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_tile_reader.py: 2 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _AbsorbanceCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 5 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 5 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:33:
 RuntimeWarning: divide by zero encountered in log10
    np.log10(absd, absd)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:38:
 RuntimeWarning: divide by zero encountered in log10
    absd = np.log10(data.X)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 6 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 6 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:32:
 RuntimeWarning: divide by zero encountered in divide
    absd = ref_X / data.X

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:32:
 RuntimeWarning: invalid value encountered in divide
    absd = ref_X / data.X

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 11 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 11 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _RubberbandBaselineCommon should define __eq__ and __hash__ to be used for 
compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:402:
 RuntimeWarning: invalid value encountered in divide
    data.X /= norm_data.X

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:420:
 RuntimeWarning: invalid value encountered in divide
    data.X = data.X / (max - min)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 5 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 5 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:462:
 RuntimeWarning: divide by zero encountered in divide
    return replace_infs(data.X / ref_X)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py:
 42 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py: 42 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:52:
 UserWarning: _NormalizePhaseReferenceCommon should define __eq__ and __hash__ to be used 
for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalizeReference::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalizeReference::test_no_infs
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:462:
 RuntimeWarning: invalid value encountered in divide
    return replace_infs(data.X / ref_X)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_readers.py::TestOmnicMapReader::test_read
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_readers.py::TestOmnicMapReader::test_read
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/pymca5/OmnicMap.py:148:
 RuntimeWarning: invalid value encountered in scalar divide
    deltaY = (yPositions[-1] - yPositions[0]) / (self.__nFiles - 1)

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py:
 5 warnings
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_tile_reader.py: 5 
warnings
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owtilefile.py:121:
 DeprecationWarning: 'addSpace' has been deprecated. Use gui.separator instead.
    vbox = gui.radioButtons(None, self, "source", box=True, addSpace=True,

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs
  /usr/lib/python3/dist-packages/extranormal3/normal_xas.py:83: RuntimeWarning: 
invalid value encountered in divide
    return 
numpy.array((spectrum[1]-preedge_fitcurve[1]-flattening)/norm_const), norm_const

.pybuild/cpython3_3.12_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestExtractEXAFS::test_file
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_xas.py::TestExtractEXAFS::test_file
  /usr/lib/python3/dist-packages/extranormal3/extra_exafs.py:96: 
RuntimeWarning: divide by zero encountered in divide
    sigma=1./k_interp**kweight

.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_agilent_fft_ab
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_irfft.py:97:
 RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_multi_ab
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_irfft.py:134:
 RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owalignstack.py::test_image
  /usr/lib/python3/dist-packages/_pytest/python.py:163: 
PytestReturnNotNoneWarning: Expected None, but 
.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owalignstack.py::test_image
 returned array([[0., 1., 0., 0., 0., 0., 1.],
         [0., 0., 5., 0., 0., 0., 1.],
         [0., 0., 0., 3., 0., 0., 1.],
         [0., 0., 0., 0., 1., 0., 1.],
         [0., 0., 0., 0., 0., 1., 1.]]), which will be an error in a future 
version of pytest.  Did you mean to use `assert` instead of `return`?
    warnings.warn(

.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owfft.py::TestOWFFT::test_calculation
  
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build/tests/test_owfft.py:111:
 RuntimeWarning: invalid value encountered in log10
    calc_abs = np.log10(rsc.X / ssc.X)

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_als.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestConversionMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestConversionIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestConversionIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestStrangeDataMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
orangecontrib/spectroscopy/tests/test_readers.py::TestRenishawReader::test_single_sp_reader
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED 
orangecontrib/spectroscopy/tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_infs
FAILED 
tests/test_als.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_als.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_no_samples - Attri...
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_no_attributes - At...
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_all_nans - Attribu...
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_als.py::TestCommonIndpSamplesMixin::test_no_infs - Attribut...
FAILED 
tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_samples - ...
FAILED tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_all_nans - At...
FAILED 
tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_atm_corr.py::TestCommonIndpSamplesMixin::test_no_infs - Att...
FAILED 
tests/test_cut.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_cut.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_samples - Attri...
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_attributes - At...
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_all_nans - Attribu...
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_cut.py::TestCommonIndpSamplesMixin::test_no_infs - Attribut...
FAILED 
tests/test_despike.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_despike.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_samples - A...
FAILED tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_despike.py::TestCommonIndpSamplesMixin::test_all_nans - Att...
FAILED 
tests/test_despike.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_despike.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_despike.py::TestCommonIndpSamplesMixin::test_no_infs - Attr...
FAILED 
tests/test_emsc.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_emsc.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_samples - Attr...
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_attributes - A...
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_all_nans - Attrib...
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_emsc.py::TestCommonIndpSamplesMixin::test_no_infs - Attribu...
FAILED 
tests/test_integrate.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_integrate.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_integrate.py::TestCommonIndpSamplesMixin::test_all_nans - A...
FAILED 
tests/test_integrate.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_integrate.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_integrate.py::TestCommonIndpSamplesMixin::test_no_infs - At...
FAILED 
tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_all_nans
FAILED 
tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_interpolate.py::TestCommonIndpSamplesMixin::test_no_infs - ...
FAILED 
tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_samples - A...
FAILED tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_all_nans - Att...
FAILED 
tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_me_emsc.py::TestCommonIndpSamplesMixin::test_no_infs - Attr...
FAILED 
tests/test_preprocess.py::TestConversionMixin::test_slightly_different_domain
FAILED 
tests/test_preprocess.py::TestConversionIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_preprocess.py::TestConversionIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_no_samples - Attr...
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_no_attributes - A...
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_all_nans - Attrib...
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_unordered_features
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_unknown_no_propagate
FAILED tests/test_preprocess.py::TestStrangeDataMixin::test_no_infs - Attribu...
FAILED tests/test_preprocess.py::TestCommonMixin::test_slightly_different_domain
FAILED tests/test_preprocess.py::TestCommonMixin::test_no_samples - Attribute...
FAILED tests/test_preprocess.py::TestCommonMixin::test_no_attributes - Attrib...
FAILED tests/test_preprocess.py::TestCommonMixin::test_all_nans - AttributeEr...
FAILED tests/test_preprocess.py::TestCommonMixin::test_unordered_features - A...
FAILED tests/test_preprocess.py::TestCommonMixin::test_unknown_no_propagate
FAILED tests/test_preprocess.py::TestCommonMixin::test_no_infs - AttributeErr...
FAILED 
tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_samples
FAILED tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_attributes
FAILED tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_all_nans - ...
FAILED 
tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED 
tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_preprocess.py::TestCommonIndpSamplesMixin::test_no_infs - A...
FAILED tests/test_readers.py::TestRenishawReader::test_single_sp_reader - Mod...
FAILED 
tests/test_xas.py::TestCommonIndpSamplesMixin::test_slightly_different_domain
FAILED 
tests/test_xas.py::TestCommonIndpSamplesMixin::test_whole_and_train_separate
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_samples - Attri...
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_attributes - At...
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_all_nans - Attribu...
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_unordered_features
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_unknown_no_propagate
FAILED tests/test_xas.py::TestCommonIndpSamplesMixin::test_no_infs - Attribut...
=== 194 failed, 1476 passed, 368 skipped, 2789 warnings in 157.43s (0:02:37) ===
Widgets left: 0    Max widgets: 21361

E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd 
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_orange-spectroscopy/build; python3.12 
-m pytest
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.12 
returned exit code 13
make: *** [debian/rules:5: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202410/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.

--- End Message ---
--- Begin Message --- 
Source: orange-spectroscopy
Source-Version: 0.7.2-2
Done: Roland Mas <[email protected]>

We believe that the bug you reported is fixed in the latest version of
orange-spectroscopy, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Roland Mas <[email protected]> (supplier of updated orange-spectroscopy 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 01 Nov 2024 12:15:41 +0100
Source: orange-spectroscopy
Architecture: source
Version: 0.7.2-2
Distribution: unstable
Urgency: medium
Maintainer: Debian PaN Maintainers 
<[email protected]>
Changed-By: Roland Mas <[email protected]>
Closes: 1085956
Changes:
 orange-spectroscopy (0.7.2-2) unstable; urgency=medium
 .
   * Update build-depends.
   * Fix running of testsuite to fix "FTBFS: AttributeError:
     'TestCommonIndpSamplesMixin' object has no attribute 'preprocessors'",
     thanks to Santiago Vila (Closes: #1085956).
Checksums-Sha1:
 64585173a22df1b2eba35a82bd1b499c5b5841a9 3144 orange-spectroscopy_0.7.2-2.dsc
 32df41ca62bf50a5de7a4e54741ace62ce417566 4632 
orange-spectroscopy_0.7.2-2.debian.tar.xz
 6f55d7ea76914a1d69c9a74f97adc976d9ac0b00 21140 
orange-spectroscopy_0.7.2-2_amd64.buildinfo
Checksums-Sha256:
 d2ad2daae4a28d09da95890efeb33c7782d9736f94c86e945ff22fe9e3e68462 3144 
orange-spectroscopy_0.7.2-2.dsc
 d9bffcfef31928fb5ef3e95c361759d3168c28d24d718c94d26949e7c3824642 4632 
orange-spectroscopy_0.7.2-2.debian.tar.xz
 e4327282009709b5fd6f2e7185dbfa7b6d24e6ee3c3c34ae588617b4ba0cd4d3 21140 
orange-spectroscopy_0.7.2-2_amd64.buildinfo
Files:
 604c1d93ce1df65047a8e2b386e57124 3144 python optional 
orange-spectroscopy_0.7.2-2.dsc
 7e5042644494dfe2ff94526808d5f16b 4632 python optional 
orange-spectroscopy_0.7.2-2.debian.tar.xz
 2f0c84364c305d162087482cc4236ea4 21140 python optional 
orange-spectroscopy_0.7.2-2_amd64.buildinfo

-----BEGIN PGP SIGNATURE-----
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=/4W5
-----END PGP SIGNATURE-----

Attachment: pgpmGPiKLIo9t.pgp
Description: PGP signature


--- End Message ---

Reply via email to