Your message dated Tue, 17 Dec 2024 11:19:32 +0000
with message-id <[email protected]>
and subject line Bug#1090107: fixed in nabu 2024.2.0-1
has caused the Debian Bug report #1090107,
regarding nabu: FTBFS: E ModuleNotFoundError: No module named 'tomoscan.series'
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1090107: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1090107
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:nabu
Version: 2024.2.0~rc4-1
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build"
module
I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation
--wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu
* Building wheel...
running bdist_wheel
running build
running build_py
creating build/lib/nabu
copying nabu/utils.py -> build/lib/nabu
[... snipped ...]
adding 'nabu/app/cast_volume.py'
adding 'nabu/app/cli_configs.py'
adding 'nabu/app/compare_volumes.py'
adding 'nabu/app/composite_cor.py'
adding 'nabu/app/correct_rot.py'
adding 'nabu/app/create_distortion_map_from_poly.py'
adding 'nabu/app/diag_to_pix.py'
adding 'nabu/app/diag_to_rot.py'
adding 'nabu/app/double_flatfield.py'
adding 'nabu/app/generate_header.py'
adding 'nabu/app/histogram.py'
adding 'nabu/app/multicor.py'
adding 'nabu/app/nx_z_splitter.py'
adding 'nabu/app/parse_reconstruction_log.py'
adding 'nabu/app/prepare_weights_double.py'
adding 'nabu/app/reconstruct.py'
adding 'nabu/app/reconstruct_helical.py'
adding 'nabu/app/reduce_dark_flat.py'
adding 'nabu/app/rotate.py'
adding 'nabu/app/shrink_dataset.py'
adding 'nabu/app/stitching.py'
adding 'nabu/app/utils.py'
adding 'nabu/app/validator.py'
adding 'nabu/app/tests/test_reduce_dark_flat.py'
adding 'nabu/cuda/__init__.py'
adding 'nabu/cuda/convolution.py'
adding 'nabu/cuda/fft.py'
adding 'nabu/cuda/kernel.py'
adding 'nabu/cuda/medfilt.py'
adding 'nabu/cuda/padding.py'
adding 'nabu/cuda/processing.py'
adding 'nabu/cuda/utils.py'
adding 'nabu/cuda/src/ElementOp.cu'
adding 'nabu/cuda/src/backproj.cu'
adding 'nabu/cuda/src/backproj_polar.cu'
adding 'nabu/cuda/src/boundary.h'
adding 'nabu/cuda/src/cone.cu'
adding 'nabu/cuda/src/convolution.cu'
adding 'nabu/cuda/src/dfi_fftshift.cu'
adding 'nabu/cuda/src/flatfield.cu'
adding 'nabu/cuda/src/fourier_wavelets.cu'
adding 'nabu/cuda/src/halftomo.cu'
adding 'nabu/cuda/src/helical_padding.cu'
adding 'nabu/cuda/src/hierarchical_backproj.cu'
adding 'nabu/cuda/src/histogram.cu'
adding 'nabu/cuda/src/interpolation.cu'
adding 'nabu/cuda/src/medfilt.cu'
adding 'nabu/cuda/src/normalization.cu'
adding 'nabu/cuda/src/padding.cu'
adding 'nabu/cuda/src/proj.cu'
adding 'nabu/cuda/src/rotation.cu'
adding 'nabu/cuda/src/transpose.cu'
adding 'nabu/cuda/tests/__init__.py'
adding 'nabu/estimation/__init__.py'
adding 'nabu/estimation/alignment.py'
adding 'nabu/estimation/cor.py'
adding 'nabu/estimation/cor_sino.py'
adding 'nabu/estimation/distortion.py'
adding 'nabu/estimation/focus.py'
adding 'nabu/estimation/tilt.py'
adding 'nabu/estimation/translation.py'
adding 'nabu/estimation/utils.py'
adding 'nabu/estimation/tests/__init__.py'
adding 'nabu/estimation/tests/test_alignment.py'
adding 'nabu/estimation/tests/test_cor.py'
adding 'nabu/estimation/tests/test_focus.py'
adding 'nabu/estimation/tests/test_tilt.py'
adding 'nabu/estimation/tests/test_translation.py'
adding 'nabu/io/__init__.py'
adding 'nabu/io/cast_volume.py'
adding 'nabu/io/detector_distortion.py'
adding 'nabu/io/reader.py'
adding 'nabu/io/reader_helical.py'
adding 'nabu/io/utils.py'
adding 'nabu/io/writer.py'
adding 'nabu/io/tests/__init__.py'
adding 'nabu/io/tests/test_cast_volume.py'
adding 'nabu/io/tests/test_detector_distortion.py'
adding 'nabu/io/tests/test_readers.py'
adding 'nabu/io/tests/test_writers.py'
adding 'nabu/misc/__init__.py'
adding 'nabu/misc/binning.py'
adding 'nabu/misc/fftshift.py'
adding 'nabu/misc/filters.py'
adding 'nabu/misc/fourier_filters.py'
adding 'nabu/misc/histogram.py'
adding 'nabu/misc/histogram_cuda.py'
adding 'nabu/misc/kernel_base.py'
adding 'nabu/misc/padding.py'
adding 'nabu/misc/padding_base.py'
adding 'nabu/misc/processing_base.py'
adding 'nabu/misc/rotation.py'
adding 'nabu/misc/rotation_cuda.py'
adding 'nabu/misc/transpose.py'
adding 'nabu/misc/unsharp.py'
adding 'nabu/misc/unsharp_cuda.py'
adding 'nabu/misc/unsharp_opencl.py'
adding 'nabu/misc/utils.py'
adding 'nabu/misc/tests/__init__.py'
adding 'nabu/misc/tests/test_binning.py'
adding 'nabu/misc/tests/test_interpolation.py'
adding 'nabu/opencl/__init__.py'
adding 'nabu/opencl/fft.py'
adding 'nabu/opencl/kernel.py'
adding 'nabu/opencl/memcpy.py'
adding 'nabu/opencl/padding.py'
adding 'nabu/opencl/processing.py'
adding 'nabu/opencl/utils.py'
adding 'nabu/opencl/src/ElementOp.cl'
adding 'nabu/opencl/src/backproj.cl'
adding 'nabu/opencl/src/fftshift.cl'
adding 'nabu/opencl/src/halftomo.cl'
adding 'nabu/opencl/src/padding.cl'
adding 'nabu/opencl/src/roll.cl'
adding 'nabu/opencl/src/transpose.cl'
adding 'nabu/opencl/tests/__init__.py'
adding 'nabu/pipeline/__init__.py'
adding 'nabu/pipeline/config.py'
adding 'nabu/pipeline/config_validators.py'
adding 'nabu/pipeline/datadump.py'
adding 'nabu/pipeline/dataset_validator.py'
adding 'nabu/pipeline/detector_distortion_provider.py'
adding 'nabu/pipeline/estimators.py'
adding 'nabu/pipeline/params.py'
adding 'nabu/pipeline/processconfig.py'
adding 'nabu/pipeline/reader.py'
adding 'nabu/pipeline/utils.py'
adding 'nabu/pipeline/writer.py'
adding 'nabu/pipeline/fullfield/__init__.py'
adding 'nabu/pipeline/fullfield/chunked.py'
adding 'nabu/pipeline/fullfield/chunked_cuda.py'
adding 'nabu/pipeline/fullfield/computations.py'
adding 'nabu/pipeline/fullfield/dataset_validator.py'
adding 'nabu/pipeline/fullfield/nabu_config.py'
adding 'nabu/pipeline/fullfield/processconfig.py'
adding 'nabu/pipeline/fullfield/reconstruction.py'
adding 'nabu/pipeline/helical/__init__.py'
adding 'nabu/pipeline/helical/dataset_validator.py'
adding 'nabu/pipeline/helical/fbp.py'
adding 'nabu/pipeline/helical/filtering.py'
adding 'nabu/pipeline/helical/gridded_accumulator.py'
adding 'nabu/pipeline/helical/helical_chunked_regridded.py'
adding 'nabu/pipeline/helical/helical_chunked_regridded_cuda.py'
adding 'nabu/pipeline/helical/helical_reconstruction.py'
adding 'nabu/pipeline/helical/helical_utils.py'
adding 'nabu/pipeline/helical/nabu_config.py'
adding 'nabu/pipeline/helical/processconfig.py'
adding 'nabu/pipeline/helical/span_strategy.py'
adding 'nabu/pipeline/helical/weight_balancer.py'
adding 'nabu/pipeline/helical/tests/__init__.py'
adding 'nabu/pipeline/tests/test_estimators.py'
adding 'nabu/pipeline/xrdct/__init__.py'
adding 'nabu/preproc/__init__.py'
adding 'nabu/preproc/alignment.py'
adding 'nabu/preproc/ccd.py'
adding 'nabu/preproc/ccd_cuda.py'
adding 'nabu/preproc/ctf.py'
adding 'nabu/preproc/ctf_cuda.py'
adding 'nabu/preproc/distortion.py'
adding 'nabu/preproc/double_flatfield.py'
adding 'nabu/preproc/double_flatfield_cuda.py'
adding 'nabu/preproc/double_flatfield_variable_region.py'
adding 'nabu/preproc/flatfield.py'
adding 'nabu/preproc/flatfield_cuda.py'
adding 'nabu/preproc/flatfield_variable_region.py'
adding 'nabu/preproc/phase.py'
adding 'nabu/preproc/phase_cuda.py'
adding 'nabu/preproc/shift.py'
adding 'nabu/preproc/shift_cuda.py'
adding 'nabu/preproc/tests/__init__.py'
adding 'nabu/preproc/tests/test_ccd_corr.py'
adding 'nabu/preproc/tests/test_ctf.py'
adding 'nabu/preproc/tests/test_double_flatfield.py'
adding 'nabu/preproc/tests/test_flatfield.py'
adding 'nabu/preproc/tests/test_paganin.py'
adding 'nabu/preproc/tests/test_vshift.py'
adding 'nabu/processing/__init__.py'
adding 'nabu/processing/azim.py'
adding 'nabu/processing/convolution_cuda.py'
adding 'nabu/processing/fft_base.py'
adding 'nabu/processing/fft_cuda.py'
adding 'nabu/processing/fft_opencl.py'
adding 'nabu/processing/fftshift.py'
adding 'nabu/processing/histogram.py'
adding 'nabu/processing/histogram_cuda.py'
adding 'nabu/processing/kernel_base.py'
adding 'nabu/processing/medfilt_cuda.py'
adding 'nabu/processing/muladd.py'
adding 'nabu/processing/muladd_cuda.py'
adding 'nabu/processing/padding_base.py'
adding 'nabu/processing/padding_cuda.py'
adding 'nabu/processing/padding_opencl.py'
adding 'nabu/processing/processing_base.py'
adding 'nabu/processing/roll_opencl.py'
adding 'nabu/processing/rotation.py'
adding 'nabu/processing/rotation_cuda.py'
adding 'nabu/processing/transpose.py'
adding 'nabu/processing/unsharp.py'
adding 'nabu/processing/unsharp_cuda.py'
adding 'nabu/processing/unsharp_opencl.py'
adding 'nabu/processing/tests/__init__.py'
adding 'nabu/processing/tests/test_fft.py'
adding 'nabu/processing/tests/test_fftshift.py'
adding 'nabu/processing/tests/test_histogram.py'
adding 'nabu/processing/tests/test_medfilt.py'
adding 'nabu/processing/tests/test_muladd.py'
adding 'nabu/processing/tests/test_padding.py'
adding 'nabu/processing/tests/test_roll.py'
adding 'nabu/processing/tests/test_rotation.py'
adding 'nabu/processing/tests/test_transpose.py'
adding 'nabu/processing/tests/test_unsharp.py'
adding 'nabu/reconstruction/__init__.py'
adding 'nabu/reconstruction/astra.py'
adding 'nabu/reconstruction/cone.py'
adding 'nabu/reconstruction/fbp.py'
adding 'nabu/reconstruction/fbp_base.py'
adding 'nabu/reconstruction/fbp_opencl.py'
adding 'nabu/reconstruction/filtering.py'
adding 'nabu/reconstruction/filtering_cuda.py'
adding 'nabu/reconstruction/filtering_opencl.py'
adding 'nabu/reconstruction/hbp.py'
adding 'nabu/reconstruction/mlem.py'
adding 'nabu/reconstruction/projection.py'
adding 'nabu/reconstruction/reconstructor.py'
adding 'nabu/reconstruction/reconstructor_cuda.py'
adding 'nabu/reconstruction/rings.py'
adding 'nabu/reconstruction/rings_cuda.py'
adding 'nabu/reconstruction/sinogram.py'
adding 'nabu/reconstruction/sinogram_cuda.py'
adding 'nabu/reconstruction/sinogram_opencl.py'
adding 'nabu/reconstruction/tests/__init__.py'
adding 'nabu/reconstruction/tests/test_cone.py'
adding 'nabu/reconstruction/tests/test_deringer.py'
adding 'nabu/reconstruction/tests/test_fbp.py'
adding 'nabu/reconstruction/tests/test_filtering.py'
adding 'nabu/reconstruction/tests/test_halftomo.py'
adding 'nabu/reconstruction/tests/test_mlem.py'
adding 'nabu/reconstruction/tests/test_projector.py'
adding 'nabu/reconstruction/tests/test_reconstructor.py'
adding 'nabu/reconstruction/tests/test_sino_normalization.py'
adding 'nabu/resources/__init__.py'
adding 'nabu/resources/cor.py'
adding 'nabu/resources/dataset_analyzer.py'
adding 'nabu/resources/gpu.py'
adding 'nabu/resources/logger.py'
adding 'nabu/resources/nxflatfield.py'
adding 'nabu/resources/utils.py'
adding 'nabu/resources/cli/__init__.py'
adding 'nabu/resources/templates/__init__.py'
adding 'nabu/resources/templates/bm05_pag.conf'
adding 'nabu/resources/templates/id16_ctf.conf'
adding 'nabu/resources/templates/id16_holo.conf'
adding 'nabu/resources/templates/id16a_fluo.conf'
adding 'nabu/resources/templates/id19_pag.conf'
adding 'nabu/resources/tests/__init__.py'
adding 'nabu/resources/tests/test_nxflatfield.py'
adding 'nabu/resources/tests/test_units.py'
adding 'nabu/stitching/__init__.py'
adding 'nabu/stitching/alignment.py'
adding 'nabu/stitching/config.py'
adding 'nabu/stitching/definitions.py'
adding 'nabu/stitching/frame_composition.py'
adding 'nabu/stitching/overlap.py'
adding 'nabu/stitching/sample_normalization.py'
adding 'nabu/stitching/single_axis_stitching.py'
adding 'nabu/stitching/slurm_utils.py'
adding 'nabu/stitching/stitcher_2D.py'
adding 'nabu/stitching/y_stitching.py'
adding 'nabu/stitching/z_stitching.py'
adding 'nabu/stitching/stitcher/__init__.py'
adding 'nabu/stitching/stitcher/base.py'
adding 'nabu/stitching/stitcher/post_processing.py'
adding 'nabu/stitching/stitcher/pre_processing.py'
adding 'nabu/stitching/stitcher/single_axis.py'
adding 'nabu/stitching/stitcher/stitcher.py'
adding 'nabu/stitching/stitcher/y_stitcher.py'
adding 'nabu/stitching/stitcher/z_stitcher.py'
adding 'nabu/stitching/stitcher/dumper/__init__.py'
adding 'nabu/stitching/stitcher/dumper/base.py'
adding 'nabu/stitching/stitcher/dumper/postprocessing.py'
adding 'nabu/stitching/stitcher/dumper/preprocessing.py'
adding 'nabu/stitching/tests/__init__.py'
adding 'nabu/stitching/tests/test_alignment.py'
adding 'nabu/stitching/tests/test_config.py'
adding 'nabu/stitching/tests/test_frame_composition.py'
adding 'nabu/stitching/tests/test_overlap.py'
adding 'nabu/stitching/tests/test_sample_normalization.py'
adding 'nabu/stitching/tests/test_slurm_utils.py'
adding 'nabu/stitching/tests/test_utils.py'
adding 'nabu/stitching/tests/test_y_preprocessing_stitching.py'
adding 'nabu/stitching/tests/test_z_postprocessing_stitching.py'
adding 'nabu/stitching/tests/test_z_preprocessing_stitching.py'
adding 'nabu/stitching/utils/__init__.py'
adding 'nabu/stitching/utils/post_processing.py'
adding 'nabu/stitching/utils/utils.py'
adding 'nabu/stitching/utils/tests/test_post-processing.py'
adding 'nabu/thirdparty/__init__.py'
adding 'nabu/thirdparty/algotom_convert_sino.py'
adding 'nabu/thirdparty/pore3d_deringer_munch.py'
adding 'nabu/thirdparty/tomocupy_remove_stripe.py'
adding 'nabu/thirdparty/tomopy_phase.py'
adding 'nabu/thirdparty/tomwer_load_flats_darks.py'
adding 'nabu-2024.2.0rc4.dist-info/LICENSE'
adding 'nabu-2024.2.0rc4.dist-info/METADATA'
adding 'nabu-2024.2.0rc4.dist-info/WHEEL'
adding 'nabu-2024.2.0rc4.dist-info/entry_points.txt'
adding 'nabu-2024.2.0rc4.dist-info/top_level.txt'
adding 'nabu-2024.2.0rc4.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built nabu-2024.2.0rc4-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with
"installer" module
dh_auto_test -O--buildsystem=pybuild
I: pybuild base:311: cd '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build';
python3.13 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build
configfile: pyproject.toml
plugins: typeguard-4.4.1
collected 3944 items / 4 errors / 1 skipped
==================================== ERRORS ====================================
___ ERROR collecting nabu/stitching/tests/test_y_preprocessing_stitching.py ____
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build/nabu/stitching/tests/test_y_preprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.13/importlib/__init__.py:88: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_y_preprocessing_stitching.py:6: in <module>
from nabu.stitching.y_stitching import y_stitching
nabu/stitching/y_stitching.py:2: in <module>
from nabu.stitching.stitcher.y_stitcher import PreProcessingYStitcher as
PreProcessYStitcher
nabu/stitching/stitcher/y_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
___ ERROR collecting nabu/stitching/tests/test_z_postprocessing_stitching.py ___
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build/nabu/stitching/tests/test_z_postprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.13/importlib/__init__.py:88: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_z_postprocessing_stitching.py:17: in <module>
from nabu.stitching.z_stitching import PostProcessZStitcher,
PostProcessZStitcherNoDD
nabu/stitching/z_stitching.py:4: in <module>
from nabu.stitching.stitcher.z_stitcher import PreProcessingZStitcher as
PreProcessZStitcher
nabu/stitching/stitcher/z_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
___ ERROR collecting nabu/stitching/tests/test_z_preprocessing_stitching.py ____
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build/nabu/stitching/tests/test_z_preprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.13/importlib/__init__.py:88: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_z_preprocessing_stitching.py:9: in <module>
from nabu.stitching.z_stitching import (
nabu/stitching/z_stitching.py:4: in <module>
from nabu.stitching.stitcher.z_stitcher import PreProcessingZStitcher as
PreProcessZStitcher
nabu/stitching/stitcher/z_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
_____ ERROR collecting nabu/stitching/utils/tests/test_post-processing.py ______
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build/nabu/stitching/utils/tests/test_post-processing.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.13/importlib/__init__.py:88: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/utils/tests/test_post-processing.py:3: in <module>
from nabu.stitching.stitcher.single_axis import PROGRESS_BAR_STITCH_VOL_DESC
nabu/stitching/stitcher/single_axis.py:6: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
=============================== warnings summary ===============================
../../../../../../usr/lib/python3/dist-packages/pytools/persistent_dict.py:63
/usr/lib/python3/dist-packages/pytools/persistent_dict.py:63:
RecommendedHashNotFoundWarning: Unable to import recommended hash
'siphash24.siphash13', falling back to 'hashlib.sha256'. Run 'python3 -m pip
install siphash24' to install the recommended hash.
warn("Unable to import recommended hash 'siphash24.siphash13', "
nabu/stitching/stitcher_2D.py:22
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build/nabu/stitching/stitcher_2D.py:22:
SyntaxWarning: invalid escape sequence '\/'
"""
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
ERROR nabu/stitching/tests/test_y_preprocessing_stitching.py
ERROR nabu/stitching/tests/test_z_postprocessing_stitching.py
ERROR nabu/stitching/tests/test_z_preprocessing_stitching.py
ERROR nabu/stitching/utils/tests/test_post-processing.py
!!!!!!!!!!!!!!!!!!! Interrupted: 4 errors during collection !!!!!!!!!!!!!!!!!!!!
=================== 1 skipped, 2 warnings, 4 errors in 2.44s ===================
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_nabu/build'; python3.13 -m pytest
I: pybuild base:311: cd '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build';
python3.12 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build
configfile: pyproject.toml
plugins: typeguard-4.4.1
collected 3944 items / 4 errors / 1 skipped
==================================== ERRORS ====================================
___ ERROR collecting nabu/stitching/tests/test_y_preprocessing_stitching.py ____
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build/nabu/stitching/tests/test_y_preprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_y_preprocessing_stitching.py:6: in <module>
from nabu.stitching.y_stitching import y_stitching
nabu/stitching/y_stitching.py:2: in <module>
from nabu.stitching.stitcher.y_stitcher import PreProcessingYStitcher as
PreProcessYStitcher
nabu/stitching/stitcher/y_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
___ ERROR collecting nabu/stitching/tests/test_z_postprocessing_stitching.py ___
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build/nabu/stitching/tests/test_z_postprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_z_postprocessing_stitching.py:17: in <module>
from nabu.stitching.z_stitching import PostProcessZStitcher,
PostProcessZStitcherNoDD
nabu/stitching/z_stitching.py:4: in <module>
from nabu.stitching.stitcher.z_stitcher import PreProcessingZStitcher as
PreProcessZStitcher
nabu/stitching/stitcher/z_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
___ ERROR collecting nabu/stitching/tests/test_z_preprocessing_stitching.py ____
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build/nabu/stitching/tests/test_z_preprocessing_stitching.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/tests/test_z_preprocessing_stitching.py:9: in <module>
from nabu.stitching.z_stitching import (
nabu/stitching/z_stitching.py:4: in <module>
from nabu.stitching.stitcher.z_stitcher import PreProcessingZStitcher as
PreProcessZStitcher
nabu/stitching/stitcher/z_stitcher.py:1: in <module>
from nabu.stitching.stitcher.pre_processing import PreProcessingStitching
nabu/stitching/stitcher/pre_processing.py:17: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
_____ ERROR collecting nabu/stitching/utils/tests/test_post-processing.py ______
ImportError while importing test module
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build/nabu/stitching/utils/tests/test_post-processing.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/usr/lib/python3.12/importlib/__init__.py:90: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
nabu/stitching/utils/tests/test_post-processing.py:3: in <module>
from nabu.stitching.stitcher.single_axis import PROGRESS_BAR_STITCH_VOL_DESC
nabu/stitching/stitcher/single_axis.py:6: in <module>
from tomoscan.series import Series
E ModuleNotFoundError: No module named 'tomoscan.series'
=============================== warnings summary ===============================
../../../../../../usr/lib/python3/dist-packages/pytools/persistent_dict.py:63
/usr/lib/python3/dist-packages/pytools/persistent_dict.py:63:
RecommendedHashNotFoundWarning: Unable to import recommended hash
'siphash24.siphash13', falling back to 'hashlib.sha256'. Run 'python3 -m pip
install siphash24' to install the recommended hash.
warn("Unable to import recommended hash 'siphash24.siphash13', "
nabu/stitching/stitcher_2D.py:22
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build/nabu/stitching/stitcher_2D.py:22:
SyntaxWarning: invalid escape sequence '\/'
"""
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
ERROR nabu/stitching/tests/test_y_preprocessing_stitching.py
ERROR nabu/stitching/tests/test_z_postprocessing_stitching.py
ERROR nabu/stitching/tests/test_z_preprocessing_stitching.py
ERROR nabu/stitching/utils/tests/test_post-processing.py
!!!!!!!!!!!!!!!!!!! Interrupted: 4 errors during collection !!!!!!!!!!!!!!!!!!!!
=================== 1 skipped, 2 warnings, 4 errors in 2.69s ===================
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_nabu/build'; python3.12 -m pytest
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.13
3.12" returned exit code 13
make: *** [debian/rules:6: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202412/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: nabu
Source-Version: 2024.2.0-1
Done: Roland Mas <[email protected]>
We believe that the bug you reported is fixed in the latest version of
nabu, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Roland Mas <[email protected]> (supplier of updated nabu package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 17 Dec 2024 11:52:13 +0100
Source: nabu
Architecture: source
Version: 2024.2.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian PaN Maintainers
<[email protected]>
Changed-By: Roland Mas <[email protected]>
Closes: 1090107
Changes:
nabu (2024.2.0-1) unstable; urgency=medium
.
* New upstream release.
* Add versioned build-depends on tomoscan to fix: "FTBFS: E
ModuleNotFoundError: No module named 'tomoscan.series'", thanks to
Santiago Vila (Closes: #1090107).
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