Your message dated Mon, 30 Dec 2024 11:06:48 +0000
with message-id <[email protected]>
and subject line Bug#1091589: fixed in htsjdk 4.1.3+dfsg-2
has caused the Debian Bug report #1091589,
regarding libgoby-java: FTBFS: Tries to access Internet during build
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1091589: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1091589
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:libgoby-java
Version: 3.3.1+dfsg2-11
Severity: serious
Tags: ftbfs trixie sid
User: [email protected]
Usertags: unshare
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
[ERROR] Failed to execute goal on project goby-io: Could not resolve
dependencies for project org.campagnelab.goby:goby-io:jar:3.3.1
[ERROR] dependency: org.sharegov:mjson:jar:debian (compile)
[ERROR] Cannot access central (https://repo.maven.apache.org/maven2) in
offline mode and the artifact org.sharegov:mjson:jar:debian has not been
downloaded from it before.
[ERROR] -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e
switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please
read the following articles:
[ERROR] [Help 1]
http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException
[ERROR]
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR] mvn <args> -rf :goby-io
dh_auto_build: error: /usr/lib/jvm/default-java/bin/java -noverify -cp
/usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven
-Dmaven.multiModuleProjectDirectory=/<<BUILDDIR>>/libgoby-java-3.3.1\+dfsg2
-Dclassworlds.conf=/etc/maven/m2-debian.conf
org.codehaus.plexus.classworlds.launcher.Launcher
-s/etc/maven/settings-debian.xml
-Ddebian.dir=/<<BUILDDIR>>/libgoby-java-3.3.1\+dfsg2/debian
-Dmaven.repo.local=/<<BUILDDIR>>/libgoby-java-3.3.1\+dfsg2/debian/maven-repo
--batch-mode package -DskipTests -Dnotimestamp=true -Dlocale=en_US returned
exit code 1
make: *** [debian/rules:6: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202412/
Note: You can reproduce this easily by trying to build the package using
sbuild unshare backend.
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Source: htsjdk
Source-Version: 4.1.3+dfsg-2
Done: Pierre Gruet <[email protected]>
We believe that the bug you reported is fixed in the latest version of
htsjdk, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <[email protected]> (supplier of updated htsjdk package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 30 Dec 2024 10:33:32 +0100
Source: htsjdk
Architecture: source
Version: 4.1.3+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Pierre Gruet <[email protected]>
Closes: 1091589
Changes:
htsjdk (4.1.3+dfsg-2) unstable; urgency=medium
.
* Updating the classpath of the built jar
* Updating the installed POM file (Closes: #1091589)
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