Your message dated Sun, 05 Jan 2025 19:37:11 +0000
with message-id <[email protected]>
and subject line Bug#1091565: fixed in scrm 1.7.4-2
has caused the Debian Bug report #1091565,
regarding scrm: FTBFS on i386: dh_auto_test: error: make -j8 test
"TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1 returned exit code 2
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1091565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1091565
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: scrm
Version: 1.7.4-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-20241228 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, this package failed to build
on i386.
This package currently has binary packages on i386, so this is a regression.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-param.o `test -f
> 'src/param.cc' || echo './'`src/param.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-forest.o `test -f
> 'src/forest.cc' || echo './'`src/forest.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-node.o `test -f
> 'src/node.cc' || echo './'`src/node.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-node_container.o
> `test -f 'src/node_container.cc' || echo './'`src/node_container.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-time_interval.o
> `test -f 'src/time_interval.cc' || echo './'`src/time_interval.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-model.o `test -f
> 'src/model.cc' || echo './'`src/model.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-tree_point.o
> `test -f 'src/tree_point.cc' || echo './'`src/tree_point.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/random/unit_tests-random_generator.o `test -f
> 'src/random/random_generator.cc' || echo './'`src/random/random_generator.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/random/unit_tests-mersenne_twister.o `test -f
> 'src/random/mersenne_twister.cc' || echo './'`src/random/mersenne_twister.cc
> In file included from src/random/random_generator.h:32,
> from src/random/random_generator.cc:23:
> src/random/fastfunc.h: In member function ‘double FastFunc::fastlog(double)’:
> src/random/fastfunc.h:91:17: warning: ‘y’ is used uninitialized
> [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/random/unit_tests-fastfunc.o
> `test -f 'src/random/fastfunc.cc' || echo './'`src/random/fastfunc.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/summary_statistics/unit_tests-tmrca.o `test -f
> 'src/summary_statistics/tmrca.cc' || echo './'`src/summary_statistics/tmrca.cc
> In file included from src/random/random_generator.h:32,
> from src/random/mersenne_twister.h:28,
> from src/random/mersenne_twister.cc:23:
> src/random/fastfunc.h: In member function ‘double FastFunc::fastlog(double)’:
> src/random/fastfunc.h:91:17: warning: ‘y’ is used uninitialized
> [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/summary_statistics/unit_tests-seg_sites.o `test -f
> 'src/summary_statistics/seg_sites.cc' || echo
> './'`src/summary_statistics/seg_sites.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/summary_statistics/unit_tests-frequency_spectrum.o `test -f
> 'src/summary_statistics/frequency_spectrum.cc' || echo
> './'`src/summary_statistics/frequency_spectrum.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/summary_statistics/unit_tests-newick_tree.o `test -f
> 'src/summary_statistics/newick_tree.cc' || echo
> './'`src/summary_statistics/newick_tree.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/summary_statistics/unit_tests-oriented_forest.o `test -f
> 'src/summary_statistics/oriented_forest.cc' || echo
> './'`src/summary_statistics/oriented_forest.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> src/random/unit_tests-constant_generator.o `test -f
> 'src/random/constant_generator.cc' || echo
> './'`src/random/constant_generator.cc
> In file included from src/summary_statistics/../random/random_generator.h:32,
> from src/summary_statistics/../contemporaries_container.h:34,
> from src/summary_statistics/../forest.h:51,
> from src/summary_statistics/seg_sites.h:31,
> from src/summary_statistics/seg_sites.cc:22:
> src/summary_statistics/../random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> src/summary_statistics/../random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> src/summary_statistics/../random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o src/unit_tests-forest-debug.o
> `test -f 'src/forest-debug.cc' || echo './'`src/forest-debug.cc
> In file included from src/random/random_generator.h:32,
> from src/random/constant_generator.h:29,
> from src/random/constant_generator.cc:23:
> src/random/fastfunc.h: In member function ‘double FastFunc::fastlog(double)’:
> src/random/fastfunc.h:91:17: warning: ‘y’ is used uninitialized
> [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_time_interval.o `test -f
> 'tests/unittests/test_time_interval.cc' || echo
> './'`tests/unittests/test_time_interval.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_fastfunc.o `test -f
> 'tests/unittests/test_fastfunc.cc' || echo
> './'`tests/unittests/test_fastfunc.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_param.o `test -f
> 'tests/unittests/test_param.cc' || echo './'`tests/unittests/test_param.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_random_generator.o `test -f
> 'tests/unittests/test_random_generator.cc' || echo
> './'`tests/unittests/test_random_generator.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_summary_statistics.o `test -f
> 'tests/unittests/test_summary_statistics.cc' || echo
> './'`tests/unittests/test_summary_statistics.cc
> src/forest-debug.cc: In member function ‘bool Forest::checkInvariants(const
> Node*) const’:
> src/forest-debug.cc:172:14: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 172 | okay *= checkInvariants(*it);
> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
> src/forest-debug.cc: In member function ‘bool Forest::checkTree(const Node*)
> const’:
> src/forest-debug.cc:254:36: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 254 | if ( (*it)->is_root() ) good *= checkTree(*it);
> | ~~~~~^~~~~~~~~~~~~~~~~
> src/forest-debug.cc:257:10: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 257 | good *= this->checkInvariants();
> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
> src/forest-debug.cc:258:10: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 258 | good *= this->checkNodeProperties();
> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> src/forest-debug.cc:259:10: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 259 | good *= this->checkTreeLength();
> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
> src/forest-debug.cc:260:10: warning: ‘*’ in boolean context, suggest ‘&&’
> instead [-Wint-in-bool-context]
> 260 | good *= this->checkRoots();
> | ~~~~~^~~~~~~~~~~~~~~~~~~~~
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_contemporaries_container.o `test -f
> 'tests/unittests/test_contemporaries_container.cc' || echo
> './'`tests/unittests/test_contemporaries_container.cc
> In file included from tests/unittests/test_fastfunc.cc:4:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> In file included from tests/unittests/../../src/random/random_generator.h:32,
> from tests/unittests/../../src/random/mersenne_twister.h:28,
> from tests/unittests/test_random_generator.cc:6:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> In file included from tests/unittests/../../src/random/random_generator.h:32,
> from tests/unittests/../../src/contemporaries_container.h:34,
> from tests/unittests/../../src/forest.h:51,
> from tests/unittests/test_time_interval.cc:7:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_forest.o `test -f
> 'tests/unittests/test_forest.cc' || echo './'`tests/unittests/test_forest.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_model.o `test -f
> 'tests/unittests/test_model.cc' || echo './'`tests/unittests/test_model.cc
> In file included from tests/unittests/../../src/random/random_generator.h:32,
> from tests/unittests/../../src/contemporaries_container.h:34,
> from tests/unittests/../../src/forest.h:51,
> from tests/unittests/test_summary_statistics.cc:9:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> In file included from tests/unittests/../../src/random/random_generator.h:32,
> from tests/unittests/../../src/contemporaries_container.h:34,
> from tests/unittests/test_contemporaries_container.cc:4:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_node.o `test -f
> 'tests/unittests/test_node.cc' || echo './'`tests/unittests/test_node.cc
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/unittests/unit_tests-test_node_container.o `test -f
> 'tests/unittests/test_node_container.cc' || echo
> './'`tests/unittests/test_node_container.cc
> In file included from tests/unittests/../../src/random/random_generator.h:32,
> from tests/unittests/../../src/contemporaries_container.h:34,
> from tests/unittests/../../src/forest.h:51,
> from tests/unittests/test_forest.cc:3:
> tests/unittests/../../src/random/fastfunc.h: In member function ‘double
> FastFunc::fastlog(double)’:
> tests/unittests/../../src/random/fastfunc.h:91:17: warning: ‘y’ is used
> uninitialized [-Wuninitialized]
> 91 | int expon = ((*yint) >> 52) - 1023; // base-2 exponent of
> float
> | ~^~~~~~
> tests/unittests/../../src/random/fastfunc.h:89:10: note: ‘y’ declared here
> 89 | double y = x;
> | ^
> g++ -DPACKAGE_NAME=\"scrm\" -DPACKAGE_TARNAME=\"scrm\"
> -DPACKAGE_VERSION=\"1.7.4\" -DPACKAGE_STRING=\"scrm\ 1.7.4\"
> -DPACKAGE_BUGREPORT=\"https://github.com/paulstaab/scrm/issues\";
> -DPACKAGE_URL=\"\" -DPACKAGE=\"scrm\" -DVERSION=\"1.7.4\" -DHAVE_STDIO_H=1
> -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1
> -DSTDC_HEADERS=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -DUNITTEST -DNDEBUG
> -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -Wformat -Werror=format-security -Wall -c -o
> tests/cppunit/unit_tests-test_runner.o `test -f
> 'tests/cppunit/test_runner.cc' || echo './'`tests/cppunit/test_runner.cc
> g++ -g -DUNITTEST -DNDEBUG -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=.
> -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wl,-z,relro
> -o unit_tests src/unit_tests-param.o src/unit_tests-forest.o
> src/unit_tests-node.o src/unit_tests-node_container.o
> src/unit_tests-time_interval.o src/unit_tests-model.o
> src/unit_tests-tree_point.o src/random/unit_tests-random_generator.o
> src/random/unit_tests-mersenne_twister.o src/random/unit_tests-fastfunc.o
> src/summary_statistics/unit_tests-tmrca.o
> src/summary_statistics/unit_tests-seg_sites.o
> src/summary_statistics/unit_tests-frequency_spectrum.o
> src/summary_statistics/unit_tests-newick_tree.o
> src/summary_statistics/unit_tests-oriented_forest.o
> src/random/unit_tests-constant_generator.o src/unit_tests-forest-debug.o
> tests/unittests/unit_tests-test_forest.o
> tests/unittests/unit_tests-test_model.o
> tests/unittests/unit_tests-test_node.o
> tests/unittests/unit_tests-test_node_container.o
> tests/cppunit/unit_tests-test_runner.o
> tests/unittests/unit_tests-test_time_interval.o
> tests/unittests/unit_tests-test_fastfunc.o
> tests/unittests/unit_tests-test_param.o
> tests/unittests/unit_tests-test_random_generator.o
> tests/unittests/unit_tests-test_summary_statistics.o
> tests/unittests/unit_tests-test_contemporaries_container.o -L/opt/local/lib
> -lcppunit -ldl
> ./unit_tests
> TestContemporariesContainer::add : OK
> TestContemporariesContainer::remove : OK
> TestContemporariesContainer::clear : OK
> TestContemporariesContainer::iterator : OK
> TestContemporariesContainer::sample : OK
> TestContemporariesContainer::buffer : OK
> TestContemporariesContainer::empty : OK
> TestFastFunc::testlog : OK
> TestFastFunc::testexp : OK
> TestForest::testInitialization : OK
> TestForest::testGettersAndSetters : OK
> TestForest::testCreateExampleTree : OK
> TestForest::testCheckTreeLength : OK
> TestForest::testGetFirstNode : OK
> TestForest::testSamplePoint : OK
> TestForest::testCalcRecombinationRate : OK
> TestForest::testCalcRate : OK
> TestForest::testCalcRateWithArachicSamples : OK
> TestForest::testNodeIsOld : OK
> TestForest::testPrune : OK
> TestForest::testSelectFirstTime : OK
> TestForest::testSampleEventType : OK
> TestForest::testSampleEvent : OK
> TestForest::testGetNodeState : OK
> TestForest::testCut : OK
> TestForest::testImplementCoalescence : OK
> TestForest::testBuildInitialTree : OK
> TestForest::testImplementRecombination : OK
> TestForest::testImplementFixTimeEvent : OK
> TestForest::testPrintTree : OK
> TestForest::testCopyConstructor : OK
> TestForest::testCheckForNodeAtHeight : OK
> TestForest::testPrintLocusSumStats : OK
> TestForest::testSampleNextPosition : OK
> TestForest::testClear : OK
> TestModel::testSetGetMutationRate : OK
> TestModel::testAddChangePositions : OK
> TestModel::testSetGetRecombinationRate : OK
> TestModel::testGetPopulationSize : OK
> TestModel::testAddChangeTime : OK
> TestModel::testAddSampleSizes : OK
> TestModel::testAddPopulationSizes : OK
> TestModel::testAddRelativePopulationSizes : OK
> TestModel::testAddGrowthRates : OK
> TestModel::testAddMigRates : OK
> TestModel::testAddMigRate : OK
> TestModel::testDebugConstructor : OK
> TestModel::testIncreaseTime : OK
> TestModel::testGetNextTime : OK
> TestModel::testGetters : OK
> TestModel::testHasFixedTimeEvent : OK
> TestModel::testCheck : OK
> TestModel::testPopSizeAfterGrowth : OK
> TestModel::testAddSummaryStatistic : OK
> TestModel::testSetLocusLength : OK
> TestModel::testAddPopToVectorList : OK
> TestModel::testAddPopToMatrixList : OK
> TestNode::testGettersAndSetters : OK
> TestNode::testIsRoot : OK
> TestNode::testInSample : OK
> TestNode::testSamplesBelow : OK
> TestNode::testLengthBelow : OK
> TestNode::testCountChildren : OK
> TestNode::testLocalNavigation : OK
> TestNodeContainer::testGet : OK
> TestNodeContainer::testAdd : OK
> TestNodeContainer::testNodeIterator : OK
> TestNodeContainer::testNodeIteratorHeight : OK
> TestNodeContainer::testReverseIterator : OK
> TestNodeContainer::testRemove : OK
> TestNodeContainer::testMove : OK
> TestNodeContainer::testCopyConstructor : OK
> TestNodeContainer::testClear : OK
> TestNodeContainer::testMemoryAllocation : OK
> TestParam::testMainConstructor : OK
> TestParam::testStringConstructor : OK
> TestParam::testParseBasicCmdStructure : OK
> TestParam::testParseSeeds : OK
> TestParam::testParseCommonOptions : assertion
> TestParam::testParseMigrationOptions : OK
> TestParam::testParseMergeOptions : OK
> TestParam::testParseSplitOptions : assertion
> TestParam::testParseOutputOptions : OK
> TestParam::testParseGrowthOptions : OK
> TestParam::testParseVariableRates : OK
> TestParam::testParseUnsupportedMsArguments : OK
> TestParam::testParseSequenceScaling : OK
> TestParam::testErrorOnInfintieRecRate : OK
> TestParam::testScientificNotation : OK
> TestParam::testApproximation : OK
> TestParam::testTransposeSegSites : OK
> TestParam::testNoMigrationBeforePopSetup : OK
> TestRandomGenerator::testConstructor : OK
> TestRandomGenerator::testSampleExpoLimit : OK
> TestRandomGenerator::testSampleUnitExpo : OK
> TestRandomGenerator::testSampleExpo : OK
> TestRandomGenerator::testSampleExpoExpoLimit : OK
> TestRandomGenerator::testSampleInt : OK
> TestRandomGenerator::testSeeding : OK
> TestSummaryStatistics::testTMRCA : OK
> TestSummaryStatistics::testSegSitesTraversal : OK
> TestSummaryStatistics::testSegSitesGetHaplotypes : OK
> TestSummaryStatistics::testSegSitesCalculate : OK
> TestSummaryStatistics::testSiteFrequencies : OK
> TestSummaryStatistics::testOrientedForestGenerateTreeData : OK
> TestSummaryStatistics::testOrientedForest : OK
> TestSummaryStatistics::testNewickTree : OK
> TestTimeInterval::testIteratorCreation : OK
> TestTimeInterval::testIteratorNext : OK
> TestTimeInterval::testIteratorCreationWithTimeFrames : OK
> TestTimeInterval::testIteratorNextWithTimeFrames : OK
> TestTimeInterval::testSplitIntervall : OK
> TestTimeInterval::testRecalculateTI : OK
> TestTimeInterval::testFindContemporaries : OK
> test_param.cc:170:Assertion
> Test name: TestParam::testParseCommonOptions
> assertion failed
> - Expression: areSame(0.75*model.default_pop_size(), model.population_size(0))
>
> test_param.cc:293:Assertion
> Test name: TestParam::testParseSplitOptions
> unexpected exception caught
> - Caught: std::exception or derived
> - What(): vector::_M_range_check: __n (which is 0) >= this->size() (which is
> 0)
>
> Failures !!!
> Run: 114 Failure total: 2 Failures: 2 Errors: 0
> make[1]: *** [Makefile:3770: unittests] Error 1
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> rm -fr -- /tmp/dh-xdg-rundir-hEYYsGVO
> dh_auto_test: error: make -j8 test "TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1
> returned exit code 2
The full build log is available from:
http://qa-logs.debian.net/2024/12/28/scrm_1.7.4-1_unstable-i386.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20241228;[email protected]
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20241228&[email protected]&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: scrm
Source-Version: 1.7.4-2
Done: Étienne Mollier <[email protected]>
We believe that the bug you reported is fixed in the latest version of
scrm, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <[email protected]> (supplier of updated scrm package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 05 Jan 2025 18:30:58 +0100
Source: scrm
Architecture: source
Version: 1.7.4-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Étienne Mollier <[email protected]>
Closes: 1091565
Changes:
scrm (1.7.4-2) unstable; urgency=medium
.
* Team upload.
* d/rules: build scrm with -ffloat-store on i386.
scrm recently encountered test failures apparently related to i387
excess precision, given that this fix resolves the issue; it is
unclear what triggered the error though, as the package used to build
fine on i386 a couple of years ago. (Closes: #1091565)
* d/control: declare compliance to standards version 4.7.0.
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