Your message dated Fri, 26 Sep 2025 02:39:06 +0530
with message-id <[email protected]>
and subject line Fixed in 0.2.1-3
has caused the Debian Bug report #1112653,
regarding hts-nim-tools: FTBFS: /usr/share/nimble/regex/regex.nim(859, 18)
Error: Exception can raise an unlisted exception: Exception
to be marked as done.
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Bug report if necessary, and/or fix the problem forthwith.
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--
1112653: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1112653
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:hts-nim-tools
Version: 0.2.1-2
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build.
Note: All the following packages also FTBFS, if you happen to have a fix for
any of them
maybe you can also fix some of the others:
src:hts-nim-tools
src:mosdepth
src:nim-hts
src:nim-lapper
src:nim-regex
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202508/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:hts-nim-tools, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f src/version src/vcf_check src/bam_filter src/hts_nim_tools
src/count_reads src/copy_number_sampler
rm -rf /<<PKGBUILDDIR>>/nimcache
rm -rf bin
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/hts-nim-tools.substvars debian/files
rm -fr -- debian/hts-nim-tools/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path
.\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o
-type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \)
-prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
#nim c --nimcache:/<<PKGBUILDDIR>>/nimcache -p:/usr/share/nimble/unicodeplus
-p:/usr/share/nimble/unicodedb -p:/usr/share/nimble/regex
-p:/usr/share/nimble/docopt -p:/usr/share/nimble/hts src/vcf_check.nim
#nim c --nimcache:/<<PKGBUILDDIR>>/nimcache -p:/usr/share/nimble/unicodeplus
-p:/usr/share/nimble/unicodedb -p:/usr/share/nimble/regex
-p:/usr/share/nimble/docopt -p:/usr/share/nimble/kexpr
-p:/usr/share/nimble/hts src/bam_filter.nim
#nim c --nimcache:/<<PKGBUILDDIR>>/nimcache -p:/usr/share/nimble/unicodeplus
-p:/usr/share/nimble/unicodedb -p:/usr/share/nimble/regex
-p:/usr/share/nimble/docopt -p:/usr/share/nimble/lapper
-p:/usr/share/nimble/hts src/count_reads.nim
#nim c --nimcache:/<<PKGBUILDDIR>>/nimcache -p:/usr/share/nimble/unicodeplus
-p:/usr/share/nimble/unicodedb -p:/usr/share/nimble/regex
-p:/usr/share/nimble/docopt -p:/usr/share/nimble/lapper -p:/usr/lib/nim/pure
-p:/usr/share/nimble/hts src/copy_number_sampler.nim
nim c --passC:"-Wno-incompatible-pointer-types" --debuginfo:on
--nimcache:/<<PKGBUILDDIR>>/nimcache --out:bin/hts-nim-tools
-p:/usr/share/nimble/unicodeplus -p:/usr/share/nimble/unicodedb
-p:/usr/share/nimble/regex -p:/usr/share/nimble/docopt
-p:/usr/share/nimble/lapper -p:/usr/share/nimble/kexpr -p:/usr/lib/nim/pure
-p:/usr/share/nimble/hts src/hts_nim_tools.nim
Hint: used config file '/etc/nim/nim.cfg' [Conf]
Hint: used config file '/etc/nim/config.nims' [Conf]
...............................................................................................................................................................
/usr/share/nimble/regex/regex.nim(839, 29) template/generic instantiation from
here
/usr/share/nimble/regex/regex.nim(859, 18) Error: Exception can raise an
unlisted exception: Exception
make[1]: *** [debian/rules:14: override_dh_auto_build] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:7: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Version: 0.2.1-3
Missed to include this bug in d/ch.
--- End Message ---
