Your message dated Thu, 13 Nov 2025 16:34:49 +0000
with message-id <[email protected]>
and subject line Bug#1114056: fixed in ball 1.5.0+git20220524.d85d2dd-1
has caused the Debian Bug report #1114056,
regarding ball: FTBFS: 
/<<PKGBUILDDIR>>/include/BALL/DATATYPE/contourSurface.h:305:80: error: 'const 
class BALL::TContourSurface<T>' has no member named 'data_' [-Wtemplate-body]
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)


-- 
1114056: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1114056
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:ball
Version: 1.5.0+git20180813.37fc53c-11.1
Severity: serious
Tags: ftbfs forky sid

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build.

Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202509/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:ball, so that this is still
visible in the BTS web page for this package.

Thanks.

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh clean --buildsystem=cmake --builddirectory=build # --with python3
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
[ -d source ] && cd source ; \
if [ -f Makefile ] ; \
then  \
        make clean ; \
        cd PYTHON/EXTENSIONS; \
        make clean; \
        rm -rf ../lib/Linux*; \
        rm -rf ../doc/doxygen/latex/*; \
        rm -f /<<PKGBUILDDIR>>/source/config.status 2>/dev/null; \
fi

[... snipped ...]

      |               ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::ConstBidirectionalIterator<Container, DataType, 
Position, Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Composite; DataType = BALL::Composite; Position = 
BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized 
method ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:286:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toRBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:343:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
In file included from 
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:10:
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C: In member function 
‘virtual BALL::Composite* 
BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:108:49: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)’ is 
deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; 
Traits = BALL::AtomIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h: In member 
function ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: 
implicitly-declared ‘BALL::ConstBidirectionalIterator<BALL::Composite, 
BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator<BALL::Composite, 
BALL::Atom, BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>::operator=(const 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)’ is 
deprecated [-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>’ has 
user-provided ‘BALL::ConstBidirectionalIterator<Container, DataType, 
Position, Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Composite; DataType = BALL::Atom; Position = 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>; Traits = BALL::AtomIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C: In member function 
‘virtual BALL::Composite* 
BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method 
‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)’ first 
required here
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:110:51: warning: 
implicitly-declared ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atom.h:17,
                 from /<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:8:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: 
because ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>’ has user-provided 
‘BALL::RandomAccessIterator<Container, DataType, Position, 
Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = 
BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’
  437 |                 BALL_INLINE RandomAccessIterator(const 
RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h: In member 
function ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: 
implicitly-declared ‘BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, 
int, BALL::Atom::BondIteratorTraits>& 
BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: 
because ‘BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>’ has user-provided 
‘BALL::ConstRandomAccessIterator<Container, DataType, Position, 
Traits>::ConstRandomAccessIterator(const 
BALL::ConstRandomAccessIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = 
BALL::Atom::BondIteratorTraits]’
   47 |                 BALL_INLINE ConstRandomAccessIterator(const 
ConstRandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h: In member 
function ‘BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::ConstRandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: 
implicitly-declared ‘BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, 
int, BALL::Atom::BondIteratorTraits>& 
BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
   24 |         class ConstRandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>’ has user-provided 
‘BALL::ConstBidirectionalIterator<Container, DataType, Position, 
Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = 
BALL::Atom::BondIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h: In member 
function ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: 
synthesized method ‘BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, 
int, BALL::Atom::BondIteratorTraits>& 
BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::ConstRandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ first required here
  413 |         class RandomAccessIterator
      |               ^~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C: In member function 
‘virtual BALL::Composite* 
BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method 
‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ first required here
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
   89 |                         BALL_FOREACH_BOND(*p, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:108:49: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, 
BALL::AtomIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>&)’ is 
deprecated [-Wdeprecated-copy]
  108 | for (atom_iterator = (atom_container).beginAtom(); \
      |                                                 ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
  108 |                         BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Atom, 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>, BALL::AtomIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Atom; Position = BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>; 
Traits = BALL::AtomIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/forEach.h:110:51: warning: 
implicitly-declared ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>& BALL::RandomAccessIterator<BALL::Atom, 
BALL::Bond, int, BALL::Atom::BondIteratorTraits>::operator=(const 
BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  110 |   for (bond_iterator = (*atom_iterator).beginBond(); \
      |                                                   ^
/<<PKGBUILDDIR>>/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in 
expansion of macro ‘BALL_FOREACH_BOND’
  108 |                         BALL_FOREACH_BOND(*s, atom_it, bond_it)
      |                         ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: 
because ‘BALL::RandomAccessIterator<BALL::Atom, BALL::Bond, int, 
BALL::Atom::BondIteratorTraits>’ has user-provided 
‘BALL::RandomAccessIterator<Container, DataType, Position, 
Traits>::RandomAccessIterator(const BALL::RandomAccessIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Atom; DataType = 
BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’
  437 |                 BALL_INLINE RandomAccessIterator(const 
RandomAccessIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] ce/CONCEPT/persistenceManager.C
In file included from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atomIterator.h:15,
                 from /<<PKGBUILDDIR>>/include/BALL/KERNEL/system.h:9,
                 from /<<PKGBUILDDIR>>/source/CONCEPT/persistenceManager.C:8:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/include/BALL/CONCEPT/object.h:17,
                 from 
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/persistentObject.h:9,
                 from 
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/persistenceManager.h:25,
                 from /<<PKGBUILDDIR>>/source/CONCEPT/persistenceManager.C:7:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h: In member 
function ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: 
implicitly-declared ‘BALL::ConstBidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)’ is deprecated 
[-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::ConstBidirectionalIterator<Container, DataType, 
Position, Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Composite; DataType = BALL::Composite; Position = 
BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized 
method ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:286:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toRBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:343:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] rce/CONCEPT/preferencesObject.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] IR>>/source/CONCEPT/processor.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DIR>>/source/CONCEPT/property.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] R>>/source/CONCEPT/selectable.C
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] ONCEPT/textPersistenceManager.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] IR>>/source/CONCEPT/timeStamp.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DDIR>>/source/CONCEPT/visitor.C
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] /CONCEPT/molecularInformation.C
In file included from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atomIterator.h:15,
                 from /<<PKGBUILDDIR>>/include/BALL/KERNEL/system.h:9,
                 from /<<PKGBUILDDIR>>/source/CONCEPT/molecularInformation.C:6:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/include/BALL/CONCEPT/object.h:17,
                 from 
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/persistentObject.h:9,
                 from /<<PKGBUILDDIR>>/include/BALL/CONCEPT/composite.h:13,
                 from 
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/molecularInformation.h:9,
                 from /<<PKGBUILDDIR>>/source/CONCEPT/molecularInformation.C:5:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h: In member 
function ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: 
implicitly-declared ‘BALL::ConstBidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)’ is deprecated 
[-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::ConstBidirectionalIterator<Container, DataType, 
Position, Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Composite; DataType = BALL::Composite; Position = 
BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized 
method ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:286:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toRBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:343:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DIR>>/source/COMMON/constants.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DIR>>/source/COMMON/exception.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] BUILDDIR>>/source/COMMON/hash.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] BUILDDIR>>/source/COMMON/init.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DIR>>/source/COMMON/logStream.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] BUILDDIR>>/source/COMMON/rtti.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] LDDIR>>/source/COMMON/version.C
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] ATATYPE/GRAPH/graphAlgorithms.C
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] DATATYPE/GRAPH/molecularGraph.C
In file included from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atomIterator.h:15,
                 from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atomContainer.h:9,
                 from /<<PKGBUILDDIR>>/include/BALL/KERNEL/bond.h:17,
                 from /<<PKGBUILDDIR>>/source/DATATYPE/GRAPH/molecularGraph.C:4:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/include/BALL/CONCEPT/object.h:17,
                 from 
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/persistentObject.h:9,
                 from /<<PKGBUILDDIR>>/include/BALL/CONCEPT/composite.h:13,
                 from /<<PKGBUILDDIR>>/include/BALL/KERNEL/atom.h:9,
                 from /<<PKGBUILDDIR>>/source/DATATYPE/GRAPH/molecularGraph.C:3:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h: In member 
function ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’:
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: 
implicitly-declared ‘BALL::ConstBidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>&)’ is deprecated 
[-Wdeprecated-copy]
  258 |         class BidirectionalIterator
      |               ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: 
because ‘BALL::ConstBidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::ConstBidirectionalIterator<Container, DataType, 
Position, Traits>::ConstBidirectionalIterator(const 
BALL::ConstBidirectionalIterator<Container, DataType, Position, Traits>&) [with 
Container = BALL::Composite; DataType = BALL::Composite; Position = 
BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’
   46 |                 BALL_INLINE ConstBidirectionalIterator(const 
ConstBidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function 
‘BALL::CompositeIteratorTraits& 
BALL::CompositeIteratorTraits::operator=(const 
BALL::CompositeIteratorTraits&)’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized 
method ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ first required here
  262 |                 composite_iterator_ = traits.composite_iterator_;
      |                                              ^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:286:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  286 |                 composite_iterator_ = bound_->beginComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h: In member function ‘void 
BALL::CompositeIteratorTraits::toRBegin()’:
/<<PKGBUILDDIR>>/include/BALL/KERNEL/iterator.h:343:62: warning: 
implicitly-declared ‘BALL::BidirectionalIterator<BALL::Composite, 
BALL::Composite, BALL::Composite*, BALL::Composite::CompositeIteratorTraits>& 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>::operator=(const 
BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, BALL::Composite*, 
BALL::Composite::CompositeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy]
  343 |                 composite_iterator_ = --bound_->endComposite();
      |                                                              ^
/<<PKGBUILDDIR>>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: 
because ‘BALL::BidirectionalIterator<BALL::Composite, BALL::Composite, 
BALL::Composite*, BALL::Composite::CompositeIteratorTraits>’ has 
user-provided ‘BALL::BidirectionalIterator<Container, DataType, Position, 
Traits>::BidirectionalIterator(const BALL::BidirectionalIterator<Container, 
DataType, Position, Traits>&) [with Container = BALL::Composite; DataType = 
BALL::Composite; Position = BALL::Composite*; Traits = 
BALL::Composite::CompositeIteratorTraits]’
  283 |                 BALL_INLINE BidirectionalIterator(const 
BidirectionalIterator& iterator)
      |                             ^~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] urce/DATATYPE/GRAPH/treeWidth.C
[  6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] R>>/source/DATATYPE/bitVector.C
[  6%] Building CXX object 
CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o
/usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ 
[too-long-redacted] ource/DATATYPE/contourSurface.C
In file included from /<<PKGBUILDDIR>>/source/DATATYPE/contourSurface.C:7:
/<<PKGBUILDDIR>>/include/BALL/DATATYPE/contourSurface.h: In member function 
‘bool BALL::TContourSurface<T>::operator==(const BALL::TContourSurface<T>&) 
const’:
/<<PKGBUILDDIR>>/include/BALL/DATATYPE/contourSurface.h:305:80: error: ‘const 
class BALL::TContourSurface<T>’ has no member named ‘data_’ 
[-Wtemplate-body]
  305 |                                                  && Surface::operator 
== (data.data_));
      |                                                                         
       ^~~~~
make[5]: *** [CMakeFiles/BALL.dir/build.make:564: 
CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/build'
make[4]: *** [CMakeFiles/Makefile2:2404: CMakeFiles/BALL.dir/all] Error 2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/build'
make[3]: *** [CMakeFiles/Makefile2:2411: CMakeFiles/BALL.dir/rule] Error 2
make[3]: Leaving directory '/<<PKGBUILDDIR>>/build'
make[2]: *** [Makefile:182: BALL] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build'
make[1]: *** [debian/rules:64: override_dh_auto_build-arch] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:18: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

--- End Message ---
--- Begin Message ---
Source: ball
Source-Version: 1.5.0+git20220524.d85d2dd-1
Done: Yavor Doganov <[email protected]>

We believe that the bug you reported is fixed in the latest version of
ball, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Yavor Doganov <[email protected]> (supplier of updated ball package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 13 Nov 2025 15:18:57 +0100
Source: ball
Architecture: source
Version: 1.5.0+git20220524.d85d2dd-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Yavor Doganov <[email protected]>
Closes: 1040385 1112717 1114056
Changes:
 ball (1.5.0+git20220524.d85d2dd-1) unstable; urgency=medium
 .
   * Team upload.
 .
   [ Andreas Tille ]
   * New upstream version
   * Standards-Version: 4.6.2 (routine-update)
   * Update Breaks+Replaces
   * Build-Depends: libgl-dev, liblpsolve55-dev, libnsl-dev, libsvm-dev,
     libtbb-dev
   * Build-Depends: python3-sipbuild, sip-tools
 .
   [ Bas Couwenberg ]
   * Don't use qtwebengine5-dev on mipsel, package to be removed.
 .
   [ Yavor Doganov ]
   * Run wrap-and-sort -ast.
   * debian/control (Build-Depends): Add lost qttools5-dev (#1026815).
     Remove libtirpc-dev; not really needed.  Remove Python-related stuff
     and chrpath (not sufficient for the job at hand).
     (libbal1.5, libballview1.5): Mark as Multi-Arch: same.
     (libball1.5-dev): Likewise.
     (Depends): Tighten inter-package dependencies.  Add missing
     dependencies to -dev packages.
     (libball1.5-doc) <Suggests>: Replace libball1.5 with libbal1.5-dev.
     <Conflicts>: Remove; obsolete.
     (Rules-Requires-Root): Remove; redundant.
     (Standards-Version): Claim compliance with 4.7.2; no changes needed.
   * debian/rules (CXXFLAGS, LDFLAGS): Remove definitions.
     (FORCE_SOURCE_DATE): Export for a reproducible tutorial.pdf.
     (common_targets): New helper variable.
     (override_dh_auto_configure): Run dh_auto_configure; fixes cross
     building.  Pass -DBALL_PYTHON_SUPPORT=OFF.
     Pass -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON for a reproducible build.
     (override_dh_auto_build-arch, override_dh_auto_build-indep): Use
     dh_auto_build so that parallel building works.
     (override_dh_installdocs-indep): Fix broken symlink; this allows
     BALLView to load the demo and the tutorial (Closes: #1040385).
     (override_dh_auto_install-arch): Install libraries and .cmake files in
     the Multi-Arch location.  Don't invoke chrpath.  Install .so symlinks
     in the -dev packages; they are useless otherwise.
     (override_dh_auto_install-indep): Fix lintian W: national-encoding.
   * debian/patches/gcc-15.patch: New; fix FTBFS with GCC 15
     (Closes: #1114056).
   * debian/patches/lpsolve-link.patch: New; fix linking with lpsolve.
   * debian/patches/cmake-4.patch: New; fix FTBFS with CMake 4
     (Closes: #1112717).
   * debian/patches/reproducibility.patch: New; fix two reproducibility
     issues related to Doxygen-generated documentation.
   * debian/patches/spelling-errors.patch: New; self-explanatory.
   * debian/patches/2to3.patch: Make Last-Update DEP-compliant.
   * debian/patches/missing_GLEW: Likewise.
   * debian/libball1.5-dev.dirs: Delete; not needed.
   * debian/tests/simple-examples: New test; compile some of the examples
     and run them against all available PDB files.
   * debian/tests/control: New file.
   * debian/libball1.5-data.lintian-overrides: Fix context syntax.
   * debian/libballview1.5-dev.lintian-overrides: Delete; no longer needed.
   * debian/ballview.1: Rename as...
   * debian/BALLView.1: ...so that lintian doesn't complain.
   * debian/ballview.manpages: Adjust filename.
   * debian/ballview.desktop: Rename as...
   * debian/BALLView.desktop: ...to match the executable.  Add %F to the
     Exec key to fix a lintian warning.  Add Keywords key.  Rename
     GenericName to Comment to fix an AppStream error.
   * debian/ballview.install: Adjust accordingly.
   * debian/libball1.5-doc.examples: New file; install all C++ examples.
   * debian/upstream/metadata: Add Repository and Repository-Browse.
   * debian/watch: Upgrade to version 5.
   * debian/copyright: Replace GPL-2+ with LGPL-2.1+.  Add FreeBSD and
     Modified BSD licenses.  Update copyright years.
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